Llin020893.2
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- gata4_2
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000010.1:6231934-6252677[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-16 6.4e-13 48.8 4.8 1 35 315 348 315 349 0.97 2 2 3.5e-19 1.6e-15 57.2 4.8 1 35 373 406 373 407 0.98
Sequence Information
- Coding Sequence
- ATGACTGACATCCTCTACCCCATACATAATTTCACCGATGTCGGGTTCCAGGCTCTCTGGGACAACATGGAGGAAGCCAACAGTGTGGAGGAGCGATCTCCTGAAGGGACTCCCAGCCAGACCTTGGAGGAGATATCCCAAGACAGCGTAGCTGACCAGGAACAACCCAGTCCTCCAGGAACATCCGTGATCAGAAATCAGGGACACGGGGTTCGCACCATAACGACTTCAGGAACCATCACTACAAGTCCTGAACCTCACGAACCAACCCCTTCTCCACCCGATCAATCTGAGCAACAGCAGTATACCCAGGAAACGACGAAAATCGACTACCTGCCACAGGATATTTCCCGGCCAACGATCGTCGAAAAAATCGTCACACAAGAGGGCTATGAAACCTGTGAAACAACCATGTACGTCATGCCTGACAGGTACGGCCAGGCGCGGTTTTACTCAGAGCCTGCGACGATCAAGTACGAGCGGGACGACAAAGGTGGAGCGGAAGGTTCGGCGTCGTACGTGACGCTCGAGAGTTACCCCGCGGGTGCCTCTCAGCAGTACAACGGGGAGGAGTATTTCATCAACTATAAAGAAGAGGACGAGAGTGACGCCGGGTACATCAAACCGGATCCCAACAACCTCGTCAAATATCCTCAGCAGCAGTACGAACACGCGCCCTCCCTGAACCATCAACACCAGCTGACAGTCTACAGTGGAACAAGCACTGAATACACGTATCTGCCTAAACCGCATGTGCAGAATAACTGGCCTTCCTCACAATCCGAATTCGTCACTTTCTTGCCCGGACATCAACAGACATCTTCTGGGATCAGCCATCAACCGtcgaatgaaattcattacaacATGTTCCCATCTGGTCAGCAGTGGCCTTTAGAGGATCCTTATGATCAGGGCATGATGGCAGGAAACGATATAAAGGAATGTGTTAATTGTGCTGCCAACAATACTCCTCTGTGGAGGCGCGATGGAACTGGACACCACCTCTGTAATGCATGCGGTCTCTACAACAGGATCAATGGAGTCAACCGACCACCGGTGAGAACTCAACACAAGAAAGTACCCAACCAGATAGGTAACAGGAGAGCAGGCGTCAGTTGCGCCAATTGCAGCACGACACAGACGACACTTTGGCGGAGGAATAACAGTGGAGAACCAGTCTGCAACGCATGTGGATTGTACTTCAAGCTTCACGGGGTAAATCGGCCACTCACAATGAAGAAAGATGGCATTCAAACGAGGAAGCGTAAACCGAAAAATCCCAACAGTGCCGGCATGTCAAGTCCGAAACGACAAGATCTCAAAACagaTAAGATGATGTACATCGACTCCAAACCTTCAGGTTTGGTTGGAGAAGATCCGATGCTGAGCGCAGCTGAACCCCAATTTGTGACTGGTTCCATGTTTCTGAACCAACCGTCTTACATCAGCAAGCATCTACCACCTACTAGTATGGATTCCCAGATGCCACCAACTGTTATCATCCCAACTCCATCCCAAGGCTTGGAAAGGCAACATTCGAGATCCGAATAG
- Protein Sequence
- MTDILYPIHNFTDVGFQALWDNMEEANSVEERSPEGTPSQTLEEISQDSVADQEQPSPPGTSVIRNQGHGVRTITTSGTITTSPEPHEPTPSPPDQSEQQQYTQETTKIDYLPQDISRPTIVEKIVTQEGYETCETTMYVMPDRYGQARFYSEPATIKYERDDKGGAEGSASYVTLESYPAGASQQYNGEEYFINYKEEDESDAGYIKPDPNNLVKYPQQQYEHAPSLNHQHQLTVYSGTSTEYTYLPKPHVQNNWPSSQSEFVTFLPGHQQTSSGISHQPSNEIHYNMFPSGQQWPLEDPYDQGMMAGNDIKECVNCAANNTPLWRRDGTGHHLCNACGLYNRINGVNRPPVRTQHKKVPNQIGNRRAGVSCANCSTTQTTLWRRNNSGEPVCNACGLYFKLHGVNRPLTMKKDGIQTRKRKPKNPNSAGMSSPKRQDLKTDKMMYIDSKPSGLVGEDPMLSAAEPQFVTGSMFLNQPSYISKHLPPTSMDSQMPPTVIIPTPSQGLERQHSRSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00884727; iTF_00146075; iTF_01366015;
- 90% Identity
- iTF_00146075;
- 80% Identity
- -