Llin020890.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- pnr
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000010.1:6140004-6150358[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.61 2.7e+03 -1.2 0.0 8 14 69 75 68 79 0.82 2 3 2.3e-18 1e-14 54.6 3.2 1 34 95 127 95 129 0.97 3 3 6.9e-19 3.1e-15 56.2 5.3 1 35 154 187 154 188 0.98
Sequence Information
- Coding Sequence
- ATGTTCCACGGCACGTCTAACGCGATGGCATCTACCAGTTACATGGACACGCCGAATCACAACATGTACGGTAGCGCATCAGGTCCAGTGTACGTCCCGCCGAGAGCAACTACTGGCTGGCAGGATCCATACCAGAGCCACCATCATCACCACCATCAACAGCATCAACTCAGCACACCTCCAAGCAACTCATTTTCCTGGGGCACCACAATGATGTGGCGGTCTTACGACCATTACCGACCGCATTACGAAAGCGGAATGGAAATGGGCGAAGGCAGGGAGTGCGTCAACTGTGGCGCCATCAGTACCCCGCTGTGGAGGCGAGACGGAACAGGACACTACCTCTGCAACGCCTGTGGCCTCTACCATAAAATGAACGGAATGAACCGACCATTAGTGAAACCTGTCAAAAGGCTGGTGACTCCCCACACGACTGCGACGCGCAGATTGGGCCTATGCTGTACGAATTGTGGAACGGGAACAACAACGCTTTGGCGGCGCAACAACGACGGCGAGCCTGTTTGCAACGCATGTGGCCTTTACTTCAAACTCCATGGCGTCAACCGACCATTGGCGATGAGAAAAGACGGTATTCAAACCCGGAAAAGGAAACCCAAAAAATCATCGCAAGAATCCGGAGCATCTTCGAGCCAACCTCCTTCTCAACAGGGTGATCCATCCAAAATGGTCAACATCCCCGGAGATCGTGGATACATCAGCCATGCTTCTCTCCTCCTTGCAAATACTGGCATCAAGAGTGAGCCAGCCCCCAATCAATACCAGGAGCATTTGGCAGATTCATATTCTCATTATAACCCAGGCCACTACAATCTCCAACATTCAGATTACTTGGGGAACAAATTGATGGCTTCTTCGTAA
- Protein Sequence
- MFHGTSNAMASTSYMDTPNHNMYGSASGPVYVPPRATTGWQDPYQSHHHHHHQQHQLSTPPSNSFSWGTTMMWRSYDHYRPHYESGMEMGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPVKRLVTPHTTATRRLGLCCTNCGTGTTTLWRRNNDGEPVCNACGLYFKLHGVNRPLAMRKDGIQTRKRKPKKSSQESGASSSQPPSQQGDPSKMVNIPGDRGYISHASLLLANTGIKSEPAPNQYQEHLADSYSHYNPGHYNLQHSDYLGNKLMASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01500768;
- 90% Identity
- iTF_00146074;
- 80% Identity
- -