Llin020894.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- gata4
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000010.1:6276740-6286028[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-18 6.7e-15 55.2 3.2 1 34 28 60 28 62 0.97 2 2 3.6e-19 1.6e-15 57.1 4.9 1 35 82 115 82 116 0.98
Sequence Information
- Coding Sequence
- ATGAGACGTGCGTCCCACAGTACTATGACTTATCCCTACGGCGGAGAACAGGAGGTGGAATGCTTCACGGAAGGACGCGAGTGCGTCAATTGTGGTGCCATCAGCACTCCGTTGTGGCGGCGCGACGGTACAGGACACTATCTGTGCAACGCTTGTGGTCTCTACCATAAAATGAATGGCATGAATAGACCGCTCGTGAGGCAACCGAGAAGATTGTCTACCAAAGGACGGCAAGGACTCACCTGCTCGAACTGCAATACTGGTACGACTGCGCTGTGGAGAAGAAACGCTCAAGGGGAACCCGTTTGTAACGCCTGTGGTCTGTACTACAAGCTTCACGGCGTCAATCGACCTCTAACTATGAGAAAGGACTGCATTCAGACGAGGAAACGTAAACCTAAAGGGAGCAGCAAACCGGAAGGTGTTCCTGCCAATAAGAGAATGAAAATCGACCACTCTCTGACTGGCTTCAACGAGCTCCGGCCACCTGTCAGTGCAGCGGCGACCGCCTACTCGTCGATCTACTCAGCCCATGGATTCGGTTCCTACCTGGACCCCCTGACCATCAAACAGGAGATGGAGACGCCTCACATAGTGAGCAACCCCAACAGCAGCGGCTCAGCCTCTAAGCAGGAAAGGGGATCCGTCGTCGTATGA
- Protein Sequence
- MRRASHSTMTYPYGGEQEVECFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVRQPRRLSTKGRQGLTCSNCNTGTTALWRRNAQGEPVCNACGLYYKLHGVNRPLTMRKDCIQTRKRKPKGSSKPEGVPANKRMKIDHSLTGFNELRPPVSAAATAYSSIYSAHGFGSYLDPLTIKQEMETPHIVSNPNSSGSASKQERGSVVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -