Basic Information

Insect: Lygus lineolaris
Gene Symbol: ZNF496
Assembly: GCA_030264115.1
Location: JAEMON010000015.1:6708621-6722718[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00015 0.015 16.5 0.7 1 23 120 142 120 142 0.96

2 27 3.1e-05 0.003 18.7 1.2 1 23 155 177 155 177 0.98

3 27 0.94 91 4.6 0.1 1 23 276 299 276 299 0.93

4 27 0.0011 0.11 13.8 1.5 1 23 330 353 330 353 0.95

5 27 6.2 6.1e+02 2.0 1.5 1 23 392 414 392 414 0.96

6 27 0.00046 0.045 15.0 1.1 2 23 454 476 454 476 0.96

7 27 8.3 8.1e+02 1.6 0.8 3 23 523 545 521 546 0.84

8 27 0.005 0.49 11.7 0.1 2 23 555 577 555 577 0.95

9 27 0.0082 0.8 11.1 0.4 1 23 583 606 583 606 0.95

10 27 0.0021 0.2 12.9 2.5 1 23 614 636 614 636 0.97

11 27 0.0044 0.43 11.9 1.1 2 23 702 724 701 724 0.95

12 27 0.00081 0.079 14.2 1.6 2 23 731 752 730 753 0.94

13 27 0.01 0.99 10.8 3.2 1 21 771 791 771 792 0.95

14 27 9.7e-06 0.00095 20.3 0.8 1 23 811 834 811 834 0.98

15 27 0.016 1.6 10.1 0.2 1 21 837 857 837 860 0.90

16 27 0.98 95 4.5 0.6 2 23 867 890 866 890 0.91

17 27 1.4 1.3e+02 4.1 0.5 1 23 897 920 897 920 0.93

18 27 1.8 1.7e+02 3.7 0.2 3 23 928 949 926 949 0.88

19 27 0.0062 0.61 11.4 1.3 2 23 958 979 958 979 0.97

20 27 0.056 5.4 8.4 2.5 1 19 984 1002 984 1006 0.92

21 27 0.32 31 6.1 0.3 2 23 1132 1154 1131 1154 0.94

22 27 7.1 6.9e+02 1.8 4.4 3 23 1162 1182 1160 1183 0.92

23 27 9.1 8.8e+02 1.5 1.5 2 23 1195 1216 1194 1216 0.87

24 27 2.3 2.2e+02 3.4 0.6 1 23 1228 1251 1228 1251 0.95

25 27 0.0018 0.17 13.1 0.1 2 23 1288 1309 1287 1309 0.97

26 27 0.0011 0.1 13.8 0.4 1 23 1315 1338 1315 1338 0.95

27 27 0.27 27 6.3 0.2 1 20 1343 1362 1343 1364 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00015	0.015	16.5	0.7	1	23	120	142	120	142	0.96
2	27	3.1e-05	0.003	18.7	1.2	1	23	155	177	155	177	0.98
3	27	0.94	91	4.6	0.1	1	23	276	299	276	299	0.93
4	27	0.0011	0.11	13.8	1.5	1	23	330	353	330	353	0.95
5	27	6.2	6.1e+02	2.0	1.5	1	23	392	414	392	414	0.96
6	27	0.00046	0.045	15.0	1.1	2	23	454	476	454	476	0.96
7	27	8.3	8.1e+02	1.6	0.8	3	23	523	545	521	546	0.84
8	27	0.005	0.49	11.7	0.1	2	23	555	577	555	577	0.95
9	27	0.0082	0.8	11.1	0.4	1	23	583	606	583	606	0.95
10	27	0.0021	0.2	12.9	2.5	1	23	614	636	614	636	0.97
11	27	0.0044	0.43	11.9	1.1	2	23	702	724	701	724	0.95
12	27	0.00081	0.079	14.2	1.6	2	23	731	752	730	753	0.94
13	27	0.01	0.99	10.8	3.2	1	21	771	791	771	792	0.95
14	27	9.7e-06	0.00095	20.3	0.8	1	23	811	834	811	834	0.98
15	27	0.016	1.6	10.1	0.2	1	21	837	857	837	860	0.90
16	27	0.98	95	4.5	0.6	2	23	867	890	866	890	0.91
17	27	1.4	1.3e+02	4.1	0.5	1	23	897	920	897	920	0.93
18	27	1.8	1.7e+02	3.7	0.2	3	23	928	949	926	949	0.88
19	27	0.0062	0.61	11.4	1.3	2	23	958	979	958	979	0.97
20	27	0.056	5.4	8.4	2.5	1	19	984	1002	984	1006	0.92
21	27	0.32	31	6.1	0.3	2	23	1132	1154	1131	1154	0.94
22	27	7.1	6.9e+02	1.8	4.4	3	23	1162	1182	1160	1183	0.92
23	27	9.1	8.8e+02	1.5	1.5	2	23	1195	1216	1194	1216	0.87
24	27	2.3	2.2e+02	3.4	0.6	1	23	1228	1251	1228	1251	0.95
25	27	0.0018	0.17	13.1	0.1	2	23	1288	1309	1287	1309	0.97
26	27	0.0011	0.1	13.8	0.4	1	23	1315	1338	1315	1338	0.95
27	27	0.27	27	6.3	0.2	1	20	1343	1362	1343	1364	0.92

Sequence Information

Coding Sequence: ATGACGGGTCACGGGGGTGCGGACTACCACGAGCTCTGCCGCCTCTGCGCCTCCTACGACGCcaataaattggacattttcagcGACGGCGGTCGCGAGAGGAAACTCATCGACAAGATCACGTCGTGCCTGTCGTTCGAGGTTTCCAAAGATGATCTGTACCCGAAAAGCTTGTGCTTCCGATGCATCTACAACTTGGAGAACTTCTACGATTTCCGACGAGGGTGTATCGACGCCCGGGCGAAGTTGGAGAAGGCCATCAAGCAGTTCAAGCATCTCAAGggTGATTCTCCTCACACTCCTAGCAGCAATCAACATGGAAAGCCGGATGGAAAGTTGGAAGATGAAGACGGTCCTTTCCCCTGCAGAATTTGCGGCAGACTCTTCAACTCGAAGAGTTCACTCACTATTCACGCTAAGTTCCACCAAGACAAGACGCGAGATGCGGATGGCAGCGAACCCTACTCCTGCTACGTCTGTGAAAAAGTGTTCTCCAGCAAGGGACACCTGGCGCTTCATTCGCGGGTTCACATCGGTGAAACTGGCCCTCCTGCACCACCGCCCGTTCGTCCAGTACCTGCTCAAATAAAACCCACGATTGCGCGAGCGTCCAGTATCGAAAGGggtGAAGGAGATCAGGAAACCCCACAGAAACCGAATGAAGATGGGCCATTAGATTTAAGTCAGGAGACTCAGCGACAAGAAGGTGAGAAAAAACAAGAATACCACCCCAGAAAGATCCAGAGGGACAGCAGCGGGAGTTTTCATTCTGAAGGAAATCTGGAAATCGATGTGGACGAACCCAACCCAAACGAGTCGCTAGTCTACTCTTGCCTACTGTGTGGGTTGAAGTGCGATTCGCCTCCGGTGTTGAGCGATCATTTGATAAACGAGCACAATTACTACGATCCAATCGATTTCGAGTCCCTCCATAAACAGTACAGGGATCCAGAACACCCTGAAAACATGGTGGAGGCAGAGACGGTGTTTTGCTGCGAGATTTGCTTCCGAGAATTCAACGACCGCGCAAGCCTTTGGCTCCACATGCTTTACTCACACAGGGATGAGGCGTCAAAGGCCTGCGGGATCTGTTTGAAGGTGTGCCTCGACAACGAGAGCCTCGGGCAACACGTTGAGACCTGTCACCCTCGTGAGAAAACCGAGCAGCGCAGGTACAGTTGTCAAGTTTGCGCTCGTCAGCACGACTCGCGGAAAAAACTCGTCACTCACGCCCGCATTCATAAATTGCAAGATCCAGAGGGTAACCTGGTTGATCCAGAAACAATAGTTGTTTTGAATAGCGATGTTTACAACGAAAGCCTACCAGCACAGATTCCAAACAATGACGGCTATCTGGCAAGTTGTGACATTTGTTTCAAAGTGTTTGAAAGCGAAGCTAAATTGAATAAACATAAAAGAAGCACGCATAAGGACGGAATGAATAACTCCACGTCGAACAACTACCATTTCTTCTTTGCGTGTGAACTCTGTGGGCTGTCGCATCTTTCCAGGTCGGAACGGTGGAAGCACATGTTCACAGCTCACAACGGAGATCCTGCTGTAACGTGTGAGGTCAAATCCTGTTCAAAAGTTTTTCCGACGAGCGCAGTCAAAAAAGAACATGAAACGTCCCATCACGCCGCCCAGGGAGAGTACCCCAACACGTGCGAAATTTGCGGCAAAATGTGGAAAACGAGGGTCGAATATTGGAAGCACATGATGGGCGTTCACTCTGAGAGCTTGCCTTTCATTTGTGGCGTTTGTTTGAAGGTATTTTGCGATTTACAAGGTCTCGTGACTCACGTTCGGGAAAGGCACTGGCCTTTGGTGGGAGGCGATTTTTGCTGCGATATTTGCGGGAGGCCGTACtccaaaatctcgaaaatgtCGAGGCACAGGAAGATTCATTTTGCCGTCGACGCTCCCCCTGAATTGCACGAGTTGCTGAACAACTCCAAACTCGATAGCGGAGAGAATCAACATTTCCTCCAAAACCACACCACAGCTTTGACTTGCGATCTCTGCTTAGGACCAGACAACAAACAGGAATTCGAGAACATAGATACGCTTGGAAAGCACAGACACGAAGCTCACAACGTCATGCCCTGTGATTTGTGCACCAAGTACTATGGGAGGACGTCTCATCTGTGGAAGCACGTGAATAAGATCCACAAAGGCCATCCAGACATTACTTGTCCCGTTTGTGAGAGGACGTCCGCCTCAAGAGCGCATTTGTCTACCCACATGGCGAAACACCACAGAAGTGCTGGTGGAGATGCAGCGTACGCGAAGACGGACGAAAATGGAGTCCACACGtgtgaaaaatgttctaaaatattCAGGAAAGAATCTCTCGTTCGAAAACACCTGAAACACTGCAAAGGACCTCGTCCTGCTAAACTCAATCTGCCTCCACCAGTGAATGGTGTTTATACTTGTGAACGTTGTCCTAAAACTTTCATTGCTCAGAATTTGCTCAATAAACACATGCGCAGTTCGCACGTCACGTTCAAATGTGAGATCTGTGAAATCAAGTCTAACACCAAGACTGACCTCTTCAATCACGTTGTGGCCGAGCATGGCGATCACCCTGATATTAAATGCGCCGTTACGGGATGCGATAAGATTCTGAGGTGCAAAGCTGATTTGGACAGGCATCAGAGGGACCACCGGAGCAGCACGCAGTTGCACATTTGCGTCTTTTGTGCCGAAATAGTTACCAGTAAAGTTAAGTTGAAGATGCATTTGAAGGCTCAACACGCGAAAGAGGCGAGACATCTCTGCGCTCTCTGCTTGAAGGCAGCGACCAGCTTTGACGAGCTCAGAAATCACATCGTTGAACTTCACAGCGTGATCATCAGACGTCCcaatgtctgccaagtttgcGCCAAACCTTGCTCGAGCAGGTCGAAGCTCATGGATCACGTGCGAAACCATGGTCCGGAGTTCCATCCTTGTAAAATTTGTCTGAAGATATTCCCCAGTAAAGATGAACTAGATAAACACTGCGACAATCATCCAATCAGCGAAGATGAGGAGAATGATGAAGATGACGAAGACGTGGAAGAAGTCGATGAACTGGATGCCAGCAGTATCATTGATATTATTGGCGCGCCTCAGGGAGACGTTGAGTCGGTTGATTCTTTGGATGCTAAAAGCATCAGGGATATCATTGGAGCCGGTCAAGACAACGTCAAGTTGAATAGAGTTAGCGAATCTGACAAGGAAGAAGATGCTCCACCGACCAAAAAGATGAAAATGAGTACCAAAACAGTCAAAAATAAGAACAAAGCTGGTCCTGAGTTCTTGCATCAACTCGGATTGATGCCAGATGCAGAGAAGAAAAAACCCCGTGAAATAAGAAGAGTGTTTGACGACGATTATACTGAAAGTCCTTGCGAGCTTTGTGACAAGGTGTGGCCGGCCAAGAGACACCTTTGGCAACATTTGATCCGGTTCCATAAAAACGAAGCAGGAAGGTGTTGCGGCGTTTGTTTGAAATTATGTTCCAATTACACCAGCTTGAGCGTCCACCTCGCCGTCCATCACAGGAAGAACTTCGACGGAGATGGTTCCAATATGTCTTGCAAAGTATGCGGAAAGTACCACAACGGCAGAACGAAACTCCTGAACCACTCGTTGATTCACTTCGGTCACGAAGAGCGTGCGAACGACATGGTCCATCGATGCCTGATTTGCCAATCCGTTTTCCCGCTGTTCCCGTCGTTCGTCGAACATTTACAGAAAGAACACAACCTGGCCACTGATATGAAAGAAGATGCGCCGGTAGTTGAAAACAATACGTCAGACGCTGATTTTACGCCCAAGAAAGTAGAGAAGTCGTCCAAATCACCGTTCCTGAGCTGTGAAATTTGTTCGTTGGTTTTTGCCAGCGAGATCGGACTGATGAATCATAAGCGAACTCATGAACATTCTGATAGTTTCAAATGTGGACAGTGTGGGGAGATGTACGGGTCTGCGGAGTCATTGAAGAACCACAAACAGGAGAAGCATAAAGGCGATGAATTCGTCTGTGCTGAGTGCAAATCTAATTTCAAATCCTACGAAATGTTGATAGAGCACAACAAGAGTTGTCGGGCGAAACTGAGCAAAACGTCGGACTCTGAGGAAGAGGACGACGACGAcgaagaggaggaggagagCGAAGTTGAAACGACGGGAGTGGCCGAGGAATCCGAGTCTGAAGCCAACGATGATTTGACGTCGACGTCCGACGAAGACGAAGACGACGAAGAAGCGGACGTCGAGGAGGTCGAAGACGACGACGAGGAAGACGTCGACGAAACCGAAGACGAAGAAGACGACGAGGACAATGAAGACGACGACTCGCCGCAAAGGGAAGAACTCAAAGAGATCCGCGCCATCGAAGCGTACGTCTGCGACAACATGGACAACATCGACAACATGGTTGAAGTTGTCAAAATCGATCTCTCGGACGACATTGACGGAGCTGTCAAAGCATCTTGA
Protein Sequence: MTGHGGADYHELCRLCASYDANKLDIFSDGGRERKLIDKITSCLSFEVSKDDLYPKSLCFRCIYNLENFYDFRRGCIDARAKLEKAIKQFKHLKGDSPHTPSSNQHGKPDGKLEDEDGPFPCRICGRLFNSKSSLTIHAKFHQDKTRDADGSEPYSCYVCEKVFSSKGHLALHSRVHIGETGPPAPPPVRPVPAQIKPTIARASSIERGEGDQETPQKPNEDGPLDLSQETQRQEGEKKQEYHPRKIQRDSSGSFHSEGNLEIDVDEPNPNESLVYSCLLCGLKCDSPPVLSDHLINEHNYYDPIDFESLHKQYRDPEHPENMVEAETVFCCEICFREFNDRASLWLHMLYSHRDEASKACGICLKVCLDNESLGQHVETCHPREKTEQRRYSCQVCARQHDSRKKLVTHARIHKLQDPEGNLVDPETIVVLNSDVYNESLPAQIPNNDGYLASCDICFKVFESEAKLNKHKRSTHKDGMNNSTSNNYHFFFACELCGLSHLSRSERWKHMFTAHNGDPAVTCEVKSCSKVFPTSAVKKEHETSHHAAQGEYPNTCEICGKMWKTRVEYWKHMMGVHSESLPFICGVCLKVFCDLQGLVTHVRERHWPLVGGDFCCDICGRPYSKISKMSRHRKIHFAVDAPPELHELLNNSKLDSGENQHFLQNHTTALTCDLCLGPDNKQEFENIDTLGKHRHEAHNVMPCDLCTKYYGRTSHLWKHVNKIHKGHPDITCPVCERTSASRAHLSTHMAKHHRSAGGDAAYAKTDENGVHTCEKCSKIFRKESLVRKHLKHCKGPRPAKLNLPPPVNGVYTCERCPKTFIAQNLLNKHMRSSHVTFKCEICEIKSNTKTDLFNHVVAEHGDHPDIKCAVTGCDKILRCKADLDRHQRDHRSSTQLHICVFCAEIVTSKVKLKMHLKAQHAKEARHLCALCLKAATSFDELRNHIVELHSVIIRRPNVCQVCAKPCSSRSKLMDHVRNHGPEFHPCKICLKIFPSKDELDKHCDNHPISEDEENDEDDEDVEEVDELDASSIIDIIGAPQGDVESVDSLDAKSIRDIIGAGQDNVKLNRVSESDKEEDAPPTKKMKMSTKTVKNKNKAGPEFLHQLGLMPDAEKKKPREIRRVFDDDYTESPCELCDKVWPAKRHLWQHLIRFHKNEAGRCCGVCLKLCSNYTSLSVHLAVHHRKNFDGDGSNMSCKVCGKYHNGRTKLLNHSLIHFGHEERANDMVHRCLICQSVFPLFPSFVEHLQKEHNLATDMKEDAPVVENNTSDADFTPKKVEKSSKSPFLSCEICSLVFASEIGLMNHKRTHEHSDSFKCGQCGEMYGSAESLKNHKQEKHKGDEFVCAECKSNFKSYEMLIEHNKSCRAKLSKTSDSEEEDDDDEEEEESEVETTGVAEESESEANDDLTSTSDEDEDDEEADVEEVEDDDEEDVDETEDEEDDEDNEDDDSPQREELKEIRAIEAYVCDNMDNIDNMVEVVKIDLSDDIDGAVKAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -