Llin009972.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- CSRNP3
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000003.1:34359111-34370014[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-99 7.7e-95 317.7 10.3 1 218 356 558 356 558 0.92
Sequence Information
- Coding Sequence
- ATGGCTCTACCTGATGCTGCTGGCGCCGGAAGATGCGTAGCGTCGCCGCCTGCCTGTAGCGGAAGATTGACGTCGGAAGTTGACGACGAGTCGTCAAAAAACTCGCCCCTCCCCCGGAGATTAACGTCGGAATCTGACGGGCTCCTTGAAAAACCTTTGCAGAGACTCGGTTTTGAAAGTGACGTTAGGTCGTCCGCAAACTGCTCGATCGTCCTCCACCGATTAACGCCGGAAGTGGACGGGTCGTCGCTCACAATCTCCTCTCCCGCACCTAGGCTCGTTTCGGAAGGTGACGCCGAGTCGTCCAAAAACTCTACACCCCCGAGGAGACTCAGTTCAGAAAGTGACGCCGGGTCGTCCAAAAACTGCTCTATCGTCCTCCACCGATTAACGCCAGAGCAGATCGCTGGGAGCGGGCCCAAATCGTCGCTCACGCCCAACGTGGAGAAGTGTCTCCCTGACCATGTTGGACCAACGCTCAGAAGTGAGACCACCCGCAGGAGCCTCTCAGGGGACTACAATATCATAGAAGTAGAAAGTGGCTGTTCTCAAAAGGGTATTCGCTTCGACGTCGGGAGCGTGTTTGTAGCTGATATGGGCAGCAATAATTCTGGACTGTCGCATGTCAGTGATGACATTCCAGATCTCATTACAGGTGAATACAACATGTCGAAAGTTTTGCACGAGGAGTGTCAGCCTGATAGGTCTGATGGAAGCGACTCTGGACTGGGAAGCGATTTGTCTGATGACCGCCTTGGAACGATGAAGAGCGACTCAATGTCTTCAGACGAGCTCAACACGCCCTCCCACCACACTGAGAATGGGGTATGTCCCGCCCCTGCGCAGAGCTCTCAAGGTCAGAGTGACTCCAGCGCTCCACTCGTTGCTGATGTGACCTCGTGGGAAGGGATCATGTCAGTACCAGGCGACTCACTCGCCACTCCTAGCCACATGCAGAGTGATCAGATGCTGTTGCCTGTTGCTGAGGTCAGCCGAGTACAGGCTGTGCCGCATGGAATGCTCAAAAGGCGAGGTCCAGACGGTGTATCTGAACTCCCCATCAAGAAACACAAGAAATCTATCAATTTTGGAGAGGTCGACGTCTTCTACTTCCCTAGAGCTCAAGGATTCACTTGTGTACCTTCCCAGGGTGGATCCACACTCGGGATGATGCTCACCCACACAGACAAGCAGACCTTCAGCTTGTCGGAGCACTACTCCGAGCAGAGGAGGATCCACAGGGAGATCTTGTCTCAGCTGAGGAACAGCACTTCCAACCAAACGTCTTCGTCCAGCGATTCGGACACCGACGACCAAACTACTGAATCAGAGTTGGATCCAGACAATTACTTCTTCTTGCAGCCCGTGCCTACGAGACAGAGAAGGGCGCTACTCAGGTCTGCCGGAGTCCGGAAGATTGACACGCTGGAGAAAGACGAATGTCGGGACATCCGGACGTCCAGGGAATTCTGCGGCTGCGCCTGCAAAGGTTACTGCGACCCGGACACTTGTGCATGTTCCCAAGCTGGCATCAAATGTCAGGTGGACCGCCTCAATTTCCCATGCGGCTGCACGCATGACGGCTGCGCAAATTCGAGTGGCCGCATAGAGTTCAACCCCATGAGAGTCCGGACGCACTTCATCCACACGATGATGAGGCTGGAGATGGAAAAGAAACGCGAGCAGGAGGAGGAAGCTGCAGCACGGAGAGAGGGTCTGGAAGATCATCCGCAGCCCCCTGGACCCTCGTATTCCTACGATATGACCTACTACCAGTATGACGGGTCCACCGCCAATGGCTCCACGAGCTCGTTCAGCGGCTACCAGTACAACACCTACTCGCAGACTCAATACCCGCCGGATCTATCAGAGTTTCACAACCCGGGCGGCGGACCCTACGAAGGTTTCCAGACGCCGTTTGCCACTGAACCCAGGTGCTACTCCGAGGAACCAAAAATCGAGTCCTTCTCGGATCTCCTTCAAGGTCGCTACCCTGAGTCCACCCTAGACCCCCTGGTTCTACCGGAGCACTCCGTCAAGCCTCCAACTGCACAGGATGAGGTGGAAACCGAAAATTTCGGCGAAATCATCAAGAAAACTATGGTCGAAAGTGCTACGGCTTAA
- Protein Sequence
- MALPDAAGAGRCVASPPACSGRLTSEVDDESSKNSPLPRRLTSESDGLLEKPLQRLGFESDVRSSANCSIVLHRLTPEVDGSSLTISSPAPRLVSEGDAESSKNSTPPRRLSSESDAGSSKNCSIVLHRLTPEQIAGSGPKSSLTPNVEKCLPDHVGPTLRSETTRRSLSGDYNIIEVESGCSQKGIRFDVGSVFVADMGSNNSGLSHVSDDIPDLITGEYNMSKVLHEECQPDRSDGSDSGLGSDLSDDRLGTMKSDSMSSDELNTPSHHTENGVCPAPAQSSQGQSDSSAPLVADVTSWEGIMSVPGDSLATPSHMQSDQMLLPVAEVSRVQAVPHGMLKRRGPDGVSELPIKKHKKSINFGEVDVFYFPRAQGFTCVPSQGGSTLGMMLTHTDKQTFSLSEHYSEQRRIHREILSQLRNSTSNQTSSSSDSDTDDQTTESELDPDNYFFLQPVPTRQRRALLRSAGVRKIDTLEKDECRDIRTSREFCGCACKGYCDPDTCACSQAGIKCQVDRLNFPCGCTHDGCANSSGRIEFNPMRVRTHFIHTMMRLEMEKKREQEEEAAARREGLEDHPQPPGPSYSYDMTYYQYDGSTANGSTSSFSGYQYNTYSQTQYPPDLSEFHNPGGGPYEGFQTPFATEPRCYSEEPKIESFSDLLQGRYPESTLDPLVLPEHSVKPPTAQDEVETENFGEIIKKTMVESATA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00145580;
- 90% Identity
- -
- 80% Identity
- -