Llin005620.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- -
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000001.1:90082885-90084774[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00014 0.24 12.3 0.0 3 20 3 20 1 24 0.88 2 2 0.001 1.8 9.6 0.2 25 45 42 61 41 62 0.89
Sequence Information
- Coding Sequence
- ATGTCACGTTTTACAAGTGAGGAGGATGAAACCCTGATAAATGCAGTGCAAGGTTACCCAAACCTATATGATTTGGAGAACGAAAAGTACAAAGATGTCATTTTGAAGGAACAACAGAGGGATAAAATTGCGGAATTGCTGAAGAAAAACAAAGAAGATTGCAAAAAGCGCTGGAAGGACATGAAAGACactcatttcaaaaataagaggAAGCTCGGGACTGGCAGTGCTGCcccaaataaaaatgtcaaatggtCCCTTTTCAAAGATCTTTCCTTCCTTAACAACGTCAAGCAAGAGAGACCGTCTACTAACACCCTGGCTCAGGGATCAATTGATTTAGCTTCAGATCAAGGGGAAAACACCCAATCTGACAGCCTGAACTCATTTGATGAGCCCAACAGCCGCGATGCGAATACCGATCCTGAAAGTTGTGGAAGtgcttcttcttctactttcaaaaaaccaaaaagttccatttcaaGGTTTCTTTCATTCGAGAAGAGGTCGGAAGAACGGCACGAGATGATTAAAAAACTAATGGAGGAAGAACTAATGGTGGATCACTTCATGAAGAGTATAGCACAAAGTGTGAAAATCCTCCCCCTTGAATTAATCTCTGAGGCCAAACTGGGTATTTTAACCTTGGTGACGAACCTGGAGGCCAGAGCTCGGGCACCTCATCAGTACACCGGGGATGGGTCCCTGAACTTATTTGATATGTAG
- Protein Sequence
- MSRFTSEEDETLINAVQGYPNLYDLENEKYKDVILKEQQRDKIAELLKKNKEDCKKRWKDMKDTHFKNKRKLGTGSAAPNKNVKWSLFKDLSFLNNVKQERPSTNTLAQGSIDLASDQGENTQSDSLNSFDEPNSRDANTDPESCGSASSSTFKKPKSSISRFLSFEKRSEERHEMIKKLMEEELMVDHFMKSIAQSVKILPLELISEAKLGILTLVTNLEARARAPHQYTGDGSLNLFDM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -