Llin012877.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- DNAJC1
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000005.1:10217891-10225615[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3 5.3e+03 -1.6 0.0 7 23 27 43 26 59 0.84 2 3 1.9e-05 0.033 15.1 0.0 2 45 300 346 299 347 0.89 3 3 2e-08 3.5e-05 24.6 0.0 2 44 382 429 381 431 0.84
Sequence Information
- Coding Sequence
- ATGGTTCAAAGGTTCGGATGGGTCGCTCCGGCGATCCTTGTGTTGCTGACGTTCGCCAACCCCTCGGCTGGCTGGGATTCGGAAGACCTCGAGGTTTTCGACGTCGTTGAAGAAGTTGGACAGAACTTTTACGAACTTCTCGGAGTACCGCCTaaCGCAGACTCAAAAGCTATAAAGAAAGCTTTCAGAGCACTGTCACTTACGTTGCACCCAGATAAAAATGCTGCTGCAGACGCTGAAATTAAATTTCGACAGTTGGTTTCCGTTCACGACATCCTCCGAGATGCCAACAAACGAGCAAAGTACGATGACGTTCTCATTAACGGCCTGCCAGATTGGAAGCAGGCGATCTACTACTACCGAAGAGTTCGTAAGATGGGACTCATGGAGATGTCCATCATCCTCTTCATCATAGTCACTATCGGCCAGTACTGTGTCGCTTGGGCAGCTTACTTCGAAAAGAAATATGCGATCGAAGAATTTGTCCGGTTCAAGAGCAAAAAGATACAGAAGAAACAGAAAAAGGGCAAGCCTGTGGATGAAACCGAAGCTAGAATGATTCCAGACCTCATGAACAGTCTACCAAAACCAAGTGTTACGTGCACTCTACCAGTTCAGATCTTCCGTCTCAGCTGGTTCCTGATCGTCGACGCTCCTCCGCTCACCTACCACTGGGTCCGTACCTACTTTGAAGAGCGGGCCCAAGCTGCCACTGAACAAGCGGAGGAATCttcggaagaagaagaagtttacGTGCCAAGAGAGCGAGGTCCAAGAAGGAGAAAAGGCTTCCAAGTGCCTGAGGTCACGGAATCCAGTGAAAATCATAAAGATAATACTAAAGGCAAGGAACGGCAACCACCTAAGAAGAGCCCTCCTCCCACGGCCTATGCGAGTGGACCTTGGACTGATGATGATTTCCTCGATCTCATTCGCTTAATGAAGAAATTCCCTCCAGGGACTAATGAAAGGTGGGAGAAAATTGGAGCGGCCATGAAGAGGGCTCCACATGAAGTTGCTCATTTTGCGCATAAAATGAAAGACGAAGGCTTCAAACCTGTTGTTGTGAAGGAGGAAGAGCCCGAAGTGGTCCCAGAAGTCCCAAAAAAAGTTAAAACCAGATCAACGGTGGAAGTAGAAGAGAGTCCATGGAGCCCATCGCAACAGAAAGCGCTGGAAGCTGCTCTGGCAGTCAACCCAAAAGGCTCAACTGGTGACCGGTGGGCACGAATTGCTGCCTCTGTCCCGGGAAAATCTAGAGACGAGTGCATTGTACGCTACAAGAAAATTCATGAAGCcgtcaaaaagaaaaaagaagaagtgaACGACTGCGGGCCCGAAGAAGCCGCATCGTGA
- Protein Sequence
- MVQRFGWVAPAILVLLTFANPSAGWDSEDLEVFDVVEEVGQNFYELLGVPPNADSKAIKKAFRALSLTLHPDKNAAADAEIKFRQLVSVHDILRDANKRAKYDDVLINGLPDWKQAIYYYRRVRKMGLMEMSIILFIIVTIGQYCVAWAAYFEKKYAIEEFVRFKSKKIQKKQKKGKPVDETEARMIPDLMNSLPKPSVTCTLPVQIFRLSWFLIVDAPPLTYHWVRTYFEERAQAATEQAEESSEEEEVYVPRERGPRRRKGFQVPEVTESSENHKDNTKGKERQPPKKSPPPTAYASGPWTDDDFLDLIRLMKKFPPGTNERWEKIGAAMKRAPHEVAHFAHKMKDEGFKPVVVKEEEPEVVPEVPKKVKTRSTVEVEESPWSPSQQKALEAALAVNPKGSTGDRWARIAASVPGKSRDECIVRYKKIHEAVKKKKEEVNDCGPEEAAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00145516; iTF_00883981; iTF_01365385;
- 90% Identity
- -
- 80% Identity
- -