Llin011779.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- dnajc2
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000004.1:26860519-26862315[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.6 9.8e+03 -2.4 0.0 2 16 375 389 374 395 0.76 2 3 5e-05 0.087 13.7 0.0 3 33 433 469 431 472 0.85 3 3 9.1e-13 1.6e-09 38.5 0.1 3 44 537 582 535 584 0.90
Sequence Information
- Coding Sequence
- ATGGTCGTGTTGAAGAACGAAGGCTGCGAACCCTCGGTGTTCGCATACAGGAACGTAGAATGCGTGGGACCTTATTTTATTAAGTATATTGAGTCCATCAATAGGGATCTCAACGGATCCATAGAGAAGTCTGTTGACGATGTGGAAGAGGATGAAAGCTTTCAGATCGACGACAGCTGCGATGAGTACCTCAAGAGTTTGGATCCCAAAGAATGGAAGAAGCAGGACCACTACGCCGTTCTTGGAATAAAAAATCTAAGACATGCCGCATCATCTAATATTATCAGGTCAGCTTATAGACAACAAGTTTTGAAACATCACCCGGATAAGAGGAAAGCCAATGGCGAAATTGTTGTTAGGGGAGATGACGACTATTTCACGTGCATAACCAAAGCGTGGGAGACGCTCGGAGATCAAATTAAAAGACGGTCCTACGACTCAGTTGATCCTTATTTTGATGATAATATACCTTCACCGTCCGAAGTTagtaaaaaggatttttttaaattgtttggaaaatttttcgAGTTGAACTCGCGGTGGTCGGAAAAGCAACCTGTGCCGATGTTGGGTGGTCCGGACGATTCGAGGGAAGAGGTGAATAAATTTTACTCGTTCTGGTACGATTTCATCAGCTGGCGAGAATATTCTTACGAAGACGAAGAAGGCAAAGAAACAGGACAAGATAGGGATGAAAGGAGGTGGATAGAAAAGCAGAATAAAACTGTCAGAgccaagaagaagaaagaagaaatggCTAGGATTCGGAGTCTTGTTGATATGGCGTACAACGCGGATCCCAGGGTCGTCAAGTTCAAACAGATGGACCGTGAAAAGAAAGAGGCGTATAAAAAGGCGAAGGCAGATGCTGTCcgtcaaaaaattgaggaagaaCAGAGAGCAGTGAGAGAACAAGCGGAGAAAGAAGCTAGAGAGAAAGAAGAAGCAAAGAAGGCTGAAGAAATTaaacagaaagctctgaaagctgAGAGAGAAGCAGCAAAAAGAGCTCTGAAGAAATCTCGCAAAGCATTCAGGGATTTGTGCAAGGATAATAACTACTACACAGGAGACAATGACAACGACCTCGTTAAGCACATGGAATTCGTCGAAAAGTTATGTGGATCTTGGGGTCCCAAGGAATTAGACGAACTGTGTAGCTCGTTGTCTGAAAAGGGCAGGGAAGCGTTTGTGgataaaattaaagaagaagaaatccgGGTGCAGCTGGAAATGCAGAAGATCAGTTCTGGAGGTGGGAAGCAGGTGAATGGAGGACCAAGCATTAAAGGGACACCATGGAGTCAAGCTGATATCAGTCTATTGATAAAAGCTGTAAATCTGTTCCCCGCCGGTACAGCACAAAGGTGGGAAGTTGTGGCCAACTTCATGAACCAGCATGGGAAAAATGACCGAATTCCTGTAACTGCTAAAGAAGTTCTTTCAAAAGCCAAGGAACTCCAAAGCAATGAGGAGTATAATACTGCTCTCAAACGAGCCGCTAACCAAAAGgcctttcaaaattttgaaaaagcaaagaAACCGAATACTGTCGAAGCAGAAACTTCCCAGCGGTTCGATACTCAGGAGCAGGGCGACAGTAACTCTCCGTGGACAGCAGATGAACAAAAACTTCTGGAACAGGCGCTCAAAACTTATCCTTCCTCTGCAGAAGAACGGTGGGACAAGATAGCAGCAGTTGTAAAATCGAGATCCAAAAAGGAGTGCATGCGGCGGTACAAGGAGCTGGTACAAATGGTCAAAGCGAAGAAAGAAGCTGTCAAAATGGCTTCCTAG
- Protein Sequence
- MVVLKNEGCEPSVFAYRNVECVGPYFIKYIESINRDLNGSIEKSVDDVEEDESFQIDDSCDEYLKSLDPKEWKKQDHYAVLGIKNLRHAASSNIIRSAYRQQVLKHHPDKRKANGEIVVRGDDDYFTCITKAWETLGDQIKRRSYDSVDPYFDDNIPSPSEVSKKDFFKLFGKFFELNSRWSEKQPVPMLGGPDDSREEVNKFYSFWYDFISWREYSYEDEEGKETGQDRDERRWIEKQNKTVRAKKKKEEMARIRSLVDMAYNADPRVVKFKQMDREKKEAYKKAKADAVRQKIEEEQRAVREQAEKEAREKEEAKKAEEIKQKALKAEREAAKRALKKSRKAFRDLCKDNNYYTGDNDNDLVKHMEFVEKLCGSWGPKELDELCSSLSEKGREAFVDKIKEEEIRVQLEMQKISSGGGKQVNGGPSIKGTPWSQADISLLIKAVNLFPAGTAQRWEVVANFMNQHGKNDRIPVTAKEVLSKAKELQSNEEYNTALKRAANQKAFQNFEKAKKPNTVEAETSQRFDTQEQGDSNSPWTADEQKLLEQALKTYPSSAEERWDKIAAVVKSRSKKECMRRYKELVQMVKAKKEAVKMAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00386273;
- 90% Identity
- iTF_00145515;
- 80% Identity
- -