Basic Information

Insect: Lygus lineolaris
Gene Symbol: bab1_2
Assembly: GCA_030264115.1
Location: JAEMON010000001.1:9805135-9810688[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 2.4e-11 1.8e-08 34.7 0.1 3 45 436 479 434 479 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	2.4e-11	1.8e-08	34.7	0.1	3	45	436	479	434	479	0.90

Sequence Information

Coding Sequence: ATGTCAGGAACCGAATCACACGTGTGCATTAACATTGAAATACGTCCGGCTATTGCGATCCCTGTCCTGTTTACTGTTACGGCGATTCTGAAGTTCAGTTATGATATTTGCGTGAACGCCACCGCTCTTTTTCATGATATGAGGTGTCGAATCGTTCGAATTTTGGATAACGAGGACGTGAAAAATCAAACAGCCAAAATTGAGGGGAAACAGGAATTGCCGGCTATGGCCAACCAACAGCAGTACTGCTTGAGGTGGAACAACCACAGATCAAACCTACTCACTGTCTTCGACCAACTCCTGCAAAATGAGGCCTTCACCGATGTTACCTTGGCTTGTGAGGGTGGGACGTCCGTGAAGTGTCATAAAATGGTGTTAGCAGCTTGTTCCTCGTACTTCCAAGGCTTGTTTACAGAGCTACCTTGCAGACATCCAGTTGTTGTGTTGAAGGATGTTCGGTATGATGAAATGAAAGCTATTTTGGAATATATGTATCGAGGAGAGGTAAATGTAGCCCAAAATCAATTAGCTGCACTCCTGAAAGTAGCTGAAGCATTAAAAGTCAAAGGTTTGGTAGAAGAAAATGGCAGCGCTTCCCAACCCAAGAGAACCGAAGAAGAAGGCAATGCCATTACTACCTCTACCCCAGCTCAAGCTCCTCCCAGCAGCAGCGTTAGTAGTGAACAGTGCCCTCCACACTCCACTGGAGTCCACGGAGGttcttatttttccaaaataccCTATAGCTTGTATGGAAAGTCAGGAGACAGGAATCGGATGACATCGACACCACCCACCTGGCCAGTTCCGAGCATCTCAGCGCCTGACAACCCTCCATCGAGCACTGCCCACACGCCAACTGGGTCTGGAACAATCAATCGGTGCTACGGCTCTGCCCCATCAGACATGCCTCCTCTCCGACGGAAAAAGTTCACGAATATCATGATGAGTAAGGAAACACCCATTCTGCGCTCAGTTCTCGGCCAAGGACAAGCAGATTCGTCGCAACCTGTTTCCCTCGTATGCAGACCAGACAGCTTTGAACAAGGAAATCACTCGCCTTTCACAAATGGATCTGGACATGACCAATATAAGaGCATAAAAAATGAACCAACCTCTGGTGATGCTCCCTCCCCCTACACGGATATTTCAAATGCTGAAGATGACATGGGTGAAAGGCAAACGATCTcaggaatgacccctcactccaTATACGGTGAATCAAAAGGTGGTATTTCATCAGGAATCGCAAATTATGTACCAACATCGAGACCCGAATGGAAAAGATACAAACAGTACACGCGTAACGATATAATGTCAGCGATTGAAGCAGTGAGACAACGAAGAATGAGTTGCCTCAAAGCAGCAGCTGAGTACGGAGTTCCATCACGCACCCTCTATGATAAGgtaaaaaaacttggaataacgACTGGACGTCCTATACGAAGAAGCTCAAATAGCAATCGCAGCGGATCATTCCAGTACGGCTTCCCTGGCAGCGGTTCAGTGGTATACTGTGGAAACGAAGAGGAAAATAAGTTTTCACCAAACGTTATGGACCAGAGTTTTCTGCATCACGTATTAGATGCACAAAACATTAAGCGTGAGGACTATGAAAGGGAGGCAATCGCAGCACTAGTGGCTGCTtcaaatacagaaaataattcgCTTCAAAGTGGCAACTCTTCAAGTCCAGGGAATCACGATCGCAGTCCCAGCCCTAACTTGATAAAGTACGCGCATAGACGAAGCCCCAGCCCAGTATCGCCTCAGCAGATGGAGGAAGATTCAAATCAAGTGGAAGATCTCTCAGTGTCTCGCAAAACTGACAACCCACCTCCTCCATCTCGGGTAATTATGCCTCCCATGAGTCAAGCACCTGCTATGGTCACTACTGCAAGTGACCAGCAGGAAAATACTGAATGA
Protein Sequence: MSGTESHVCINIEIRPAIAIPVLFTVTAILKFSYDICVNATALFHDMRCRIVRILDNEDVKNQTAKIEGKQELPAMANQQQYCLRWNNHRSNLLTVFDQLLQNEAFTDVTLACEGGTSVKCHKMVLAACSSYFQGLFTELPCRHPVVVLKDVRYDEMKAILEYMYRGEVNVAQNQLAALLKVAEALKVKGLVEENGSASQPKRTEEEGNAITTSTPAQAPPSSSVSSEQCPPHSTGVHGGSYFSKIPYSLYGKSGDRNRMTSTPPTWPVPSISAPDNPPSSTAHTPTGSGTINRCYGSAPSDMPPLRRKKFTNIMMSKETPILRSVLGQGQADSSQPVSLVCRPDSFEQGNHSPFTNGSGHDQYKSIKNEPTSGDAPSPYTDISNAEDDMGERQTISGMTPHSIYGESKGGISSGIANYVPTSRPEWKRYKQYTRNDIMSAIEAVRQRRMSCLKAAAEYGVPSRTLYDKVKKLGITTGRPIRRSSNSNRSGSFQYGFPGSGSVVYCGNEEENKFSPNVMDQSFLHHVLDAQNIKREDYEREAIAALVAASNTENNSLQSGNSSSPGNHDRSPSPNLIKYAHRRSPSPVSPQQMEEDSNQVEDLSVSRKTDNPPPPSRVIMPPMSQAPAMVTTASDQQENTE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00884318;
90% Identity: iTF_00884318;
80% Identity: iTF_00930479;