Llin013597.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- Mblk-1
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000005.1:23771410-23784606[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-17 3.7e-14 52.9 0.0 1 39 127 166 127 170 0.95 2 2 2.1e-18 1.6e-15 57.3 0.0 1 43 391 434 391 436 0.95
Sequence Information
- Coding Sequence
- ATGGGACGCAGGTCATGGGCCAGCTACCAGGACACCATGGTCGGCCAAGAGTGTAGGACCACTGAGCCAATATGCCCTTCTCACACGATCAGCGAGGTGAGCGGGGAGCGGAGCGGGAGCAGCAGCCCGGGGGGCATGGCcacctcctccccctccccatGGTACATCAAGCCCTCCGACTCGCCGCCTCTCGACGTAGTCGACCAGCCTCTCGACCTGAGCCTGTCGACGAAACCTTCGACCATCGAACGGCCGCAGCCCTTCGCCAGCCCCCCCGTCCCCCTCCTCACGAGTCACCCCATCAAAGTCCCCAGCCCCAACAAGCACATATTTAAGGCGAAGCCAAGGCTGAGTGCGGTCGCTGGGCGCCGGACCTATACGGAGGAAGAGCTGCAAGCCGCCCTTAGGGACATACAGAGTGGGAAGCTCGGGACCCGACGGGCCGCCGTCATATACGGCATCCCGAGGTCCACTCTTCGGAACAAGGTGTACAAATTGTCCCAGGAAAGGAGGGACATAAATGCTTTAGAGATTTCGAgggatgatgacgatgatgatgatgacaggGACCTGTCGGAGGAGGAGAGGGAAGTGGAGAAAGCGCTGATGCGGCCGTTGCTGAGCATGGAAGACGTCGTGCGGCTGCCCGAGGGGCCGTCCTGGCCGTACCTGCAGCAGCTGCTATCGCCGGCGGCGCTGCCTGAGATCGTCCGGAATATGATGGCCGAGGAGAGGCTGCTCCGGGGGTCGACGCGGCCGGGCTGCTCGACGGACAAGGAGGACGCCGGGGTCATCCTCCGGGTGCCGACGTTTAGACCCAAAGACGGGGGAGGGGGGTCGCCAGGCTGCGGCCCCAGGACGCCGTCCCCGCCTCACAAAATCCCCCCAATTAGCCTACGGGACGTCATCACCAACACTATTAGCTCTAAACTATCGCCCCAAGAAGTCAACGTCGTGACTCCCCCATCACAACCCCAACCTTTAGACTTCAGAAGAGAACCCGGAGTTATTCGAAACCACAATAACAACCACTTGGACGACAAAAAGCTGTCTCCAGGTAACAAAAGTACGGCCTCGACCAACACCAACAGTAGCAGCAGTGGGGCTCAACAAGGGCAAAGTTCAGGCGGCAAAGGAACGAGACCTAAAAGAGGAAAATACAGGAATTACGATCGAGATAGTTTGGTTGAGGCTGTCAGAGCGGTTCAAAGGGGAGAAATGAGTGTTCATCGAGCTGGTTCATATTACGGAGTTCCACATTCAACCTTAGAGTACAAAGTCAAGGAGAGGCATTTGATGAGGCCGAGGAAGAGGGAGCCGAAGCCACAAGTTACGGCGGAGGCCGAGGCGAAAGGGAAGGTGGAGATACGAGCACCGCCGAGGCTGCAGAGGTTCACGCCGCCGCTGCCGCCTGGGGCAGTGACCAACGGGTTGAAGGTTCCTCCTGGATTCGACCCTGCGGCTTTAGGAGCGTATCCACCGGCTCTGCCGTTCCCTTTCTGGCCGTCAGCGCCGTTCCCTGGGATCCCAGGGCTCGACTACGCGGCGTCGCGGGAGCTCTTCGCGTCACAGATGATGCAGAGGCTCCACGAAGAATCAGCGTCGAACCCCCAAGCCGCCGCCAATCTGCCCAAGAGCACAAGAGCTCTCGCTGAAAGCCTCTACGACGGCTCGGGGGAGAACGGCACCTTCTTGGACGGCATCATCCGATCGAGCCTCGAGACCGGCACGTCCGGAGCGGGCAAGGAAGCAGGCAAAGCACTCCTCGAACAGCTCGTCCGCGGCGGCGCCCTGGCCGACAAGACGACGGAGACGTCCTCCTCATCCTCCAAATCCCCGCCCCCGCCGCGACCCCCGTCGACGCCCGAAGACCGACCTCCAAGTGCCTCGTGCGACCCGACCACATGCTGA
- Protein Sequence
- MGRRSWASYQDTMVGQECRTTEPICPSHTISEVSGERSGSSSPGGMATSSPSPWYIKPSDSPPLDVVDQPLDLSLSTKPSTIERPQPFASPPVPLLTSHPIKVPSPNKHIFKAKPRLSAVAGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLSQERRDINALEISRDDDDDDDDRDLSEEEREVEKALMRPLLSMEDVVRLPEGPSWPYLQQLLSPAALPEIVRNMMAEERLLRGSTRPGCSTDKEDAGVILRVPTFRPKDGGGGSPGCGPRTPSPPHKIPPISLRDVITNTISSKLSPQEVNVVTPPSQPQPLDFRREPGVIRNHNNNHLDDKKLSPGNKSTASTNTNSSSSGAQQGQSSGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQVTAEAEAKGKVEIRAPPRLQRFTPPLPPGAVTNGLKVPPGFDPAALGAYPPALPFPFWPSAPFPGIPGLDYAASRELFASQMMQRLHEESASNPQAAANLPKSTRALAESLYDGSGENGTFLDGIIRSSLETGTSGAGKEAGKALLEQLVRGGALADKTTETSSSSSKSPPPPRPPSTPEDRPPSASCDPTTC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00883697;
- 90% Identity
- iTF_00883697;
- 80% Identity
- -