Llin024198.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- kn
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000012.1:16877142-16914015[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-52 3.6e-48 165.1 0.0 41 135 69 163 65 173 0.96
Sequence Information
- Coding Sequence
- ATGACGGCTGTTGAGTGTGGCGGTTACGGGTCCGGCTCGCCCTGGGCCGCGAGCCTCTGCGGCGCCGCCGACCTCGAGGCCTGGGGTCGCAAGTTGTACCCCGGGAGTCGCATGTTCCTCCAGGACACGCTCCACCATCAGCCCCGCGGTCCCGTGTCCGGTCTCAAAGAAGAGCCTCTCCCTCCCAGGACTTGGCCAGTCGACAACTCAAGTGTGGGAGTCGGTCGAGCTCATTTCGAAAAACAACCGCCTTCGAATTTGAGGAAGTCGAATTTCTTCCATTTCGTGATAGCTCTGTACGACAGAGCCGGTCAACCCATTGAAATCGAGAGGACGGCTTTCATAGGATTTATCGAGAAAGACCAGGAAAACGAAACTCAAAAAACCAACAACGGTATCCAGTACCGGTTACAACTGCTCTACGCTAATGGAATACGGCAAGAGCAAGATATATTCGTGAGGTTGATCGACTCCGTCACGAAACAGAACCGGTTAAGCGTTTCCCCTGAAGGGGAAGGAAGCTGTGGGGCGAAACGCGCTGCACGTGACCAGCACGCGCTGTCCGCTATCGTCCGCCCGCAAGTCCCGATGAAAATTGAAGGGGAGGCGACCGACGCGAGCGCCCCTTTTGTCATGCGGAGGAATCAGTCATAA
- Protein Sequence
- MTAVECGGYGSGSPWAASLCGAADLEAWGRKLYPGSRMFLQDTLHHQPRGPVSGLKEEPLPPRTWPVDNSSVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDQENETQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQNRLSVSPEGEGSCGAKRAARDQHALSAIVRPQVPMKIEGEATDASAPFVMRRNQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -