Llin009487.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- KDM5B
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000003.1:22682053-22686423[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-19 4.4e-16 59.8 0.1 3 88 98 178 96 179 0.95 2 2 9 3.1e+04 -4.0 0.0 50 67 1002 1019 999 1026 0.71
Sequence Information
- Coding Sequence
- ATGGATCTCCGCCCAAGTTCAAGTCCTAATGGAAAGTCTCCACCGAGAAAGggaggcaaaaaatttgtttttgatccTCCTCCTGAAGCCCCAGTCTTCAGACCAACCGCTGAAGAGTTCAAGGATCCTTTGGAGTACATCAAGAAAATACGTCCAATTGGAGAGAAGACTGGAATTTGCAAAATCATTCCGCCTTCTTGGAGGAATCCGTTTGCCCTTGATATGGACACGTTGAGATTTGTGCCTAGAATTCAACGGATAAATGAGCTTGAAGCTAGGACTAGAATCAAACTCAACTTCAACGACAAACTTACGAAATTTTTTGCATTGAGTGGCAAAACCTTTCAAGTGCCAGTTATGGAAAAGACGTCGCTGGATCTCTACACTCTTCACAGGAAAGTTAAGGAGCATGGTGGGGTCGATTTTGTCAacaaagagaagaaatggagtGATATTGCGTTAAGTATGGGTTTAATGTGCAAAACAGCACCATATACACTGAAAAACCACTACGATAACTTGATTCACCCATTTCTACAATCGCAAGCTAAGAACAATGAGGAATCTAAGGATGACAATAAAGAGAATTTCTCCAAAGAAGATGGTGAAATTGATAGTGAAACTGGTGAGGGTGTTAATAAGGGCTTGATGAAGACAGCGAAAGGAGCGTCAGCAATGAGGGAACTGAAAAGTTTACGATTTTTGGGACCTGGACCCAAAATGGCTGTTTGTGATGGAGGTGTACTTCAAAAAGGACTAAGAACTAGGGGTAAGAAGATTATGTATGAATTTGATCCTTTGGCCAAATACATGTGCAAAGGGTGTAAGAAAGGCGATATTGAAGAAACATTCTTGGTGATGTGCGTAACTTGTGAAGACCGATATCATCATTCATGTTTGATTCCTCCATTATCTCTGGATGCGCCACCCATAAACTGGAGGTGCCCGAAATGTGTAGCTGCTGAAGGTTATAAACCTCTGGAGGAGTTTGGTTTTGCCCAAGCTGAAAGGGAGTACACACTGAACGAGTTCAAAGCCATGGCTAACGAGTTCAAGAGGAATTATTTCAACACGGACCCTGATCAAGTTGAACATTCTGCTGTGGAGCAAGAATTTTGGAGAGTAGTTTCATCCATAGACGAGGCAGTGACAGTGGAATACGGTGCTGACCTCCATGTTATTGAACACGGCTCTGGATTCCCCCGTCACAACCAACCTTGTGTTTCTGGTGTGGACCCAAAAAAATTCGATAAGTATGCAAACTCTCCATGGAACCTTAATAATCTACCAGTTCTCGATGATTCAGTGCTTAGGCATATAAGTGCTGATATATCCGGAATGAAAATTCCTTGGATGTACGCTGGTATGTGTTTTGCAACCTTCTGTTGGCATAATGAAGATCATTGGAGTTAttccattaattatttacaCCTGGGTGAAGCCAAAACTTGGTATGGAGTGCCCGGAAGTTACGCTGAACAATTTGAAGCTGCTATGCAAAAAGCCGCTCCAGAACTATTCGAAAGCCAACCCGATCTGCTTCACCAACTTGTTACAATCATGAACCCAAATGACATCATGGCAGCTGGTGTTCCAGTTTACAGGACTGATCAGAAAAGAGGCGAATTTGTTATCACGTTCCCCAGAGCCTATCATGCGGGTTTCAATCAAGGTTTTAATTTTGCTGAAGCCTGCAATTTTGCTCCTGCTGATTGGCTTGTGATTGGCCGTGAGTGTATCTCTCATTATTCCCAGCTTGGTAGAACTTGTGTGTTCTCTCATGACGAATTGGTTTGCAAGATGGCCATCATTTTTGACACCTTGGAAAGAGATATGGGACTTGTACTAGTTAAAGATTTGTCTCTTATGGTAGAGGCTGAACGACTTCGTCGTACTCGTGCCTTGAAACTTGGGGTGGGAAATGCTGTTCATGTAGACTTTGAAAAGCTGCCAGATGATGAACGTCAATGTTGTGTCTGTAACACTACTGTTTTTCTCTCAGCTGTAGCGTGTCCTTGCGATTACACCCGCCTTGTTTGCTTGGACCACATAACCAGGCTGTGCAGCTGTGATTCTTCAAATTATGTAATGAAATATCAGCTAAAACTTGACATTCTACAAAATTTATTGGTAGTTATCAGTTCCAAATTATGCGGTTTCGGCAGTTGGACTACCAGAGTAGAAGAGGCTCTGCATGGCAAGAGTGAAAAGAAAGTGTCTCTTCGGAAACTCACCGAACTGTTAGTTGAGGCTAAAGAAAAGGAATTCCCTCATAGTGAGCTTGTTGAACTTCTTGAGTATCATGTCAGAAGGTGCATTGAGTGCTCTGCCCTGTCTAAAGCACTAGTTGCAAATTGTAGCAATAAAGACAATCCCAGCAAAATAACTGTAGATGATCTTGAGCTTTTCTTTCAAGAAATCGAAAAACTACCGTGTTCCATATCAGAAGAATCTGCAGTAAAAGATATTCTTGACAAGGCCAAGAAATTTCAGAATTGCGCTCGAAGAGTTCTCAGTATGAAGGACATTTCCAAGTCCCgagttttgaaatgttataaAATGGGACAGTCTCTCAATTTAGATTTGCCAGAAATGCAGGAATTGGAAAAAAAGATAATGGAGTTTGAGTGGGTAGACAAAGTTGGATTTGCTATTGATGCTGAATTTGACCTTGACTTTGTAAGTAAACTTGCAGATGACGGTAAATCATTGTGCGATTCTCCACTTgtagaaaaaaccaaaataaagctcaataaatacataaGTGAGAGAACGCCTGATATAGCCATCGTAAATGTTCAGTCTATTGCTGATATGGAAGGAACCATTATCAGGGGTCCTCCAATCCAGTCGAGGGGTCAGACAAACGAACTCGAACGATCTCTGATGAAAGTTTTACATGGCGACGTCGTCCTCTACCTAAATGAACTGGAGAAATTGGTCGCGATGGCTAAACAAAAAACTCCTGAATCGAGTACACTAAAACAAGTAGAACATCACGTTATCGTGGCTAGAAATTGGAAAATGGCTGCTGAAGCACTGTTCTTGAAAAAGAACGATCCCAATTCTCTGATGGAAGCTTTATGGCCTCGTAAATTTGTCTCTCGCCATCTTTATTTTGCCAAACAAGTGATAAAACAAGCTGCAGGCATTGAATCGTTGTTAGTAAAATCTGATGATGCACACTATAGTAAGAGTGCTTACAAAAATGCTTTGATGCAAGAATTCCACACGCTGTCCAAGTTGAGGCTTGACAACCTCAGGAAAATGGATACCGAAGATTTTGGCTCTGTCAAGTGTATTTGTGGCAACTCAATGGATGGCACTGCTATTGTTTGTGAACTGTGTCACACTGCAATGCACTTGAGATGCTTCAAGGAAACTGATTGGACCAGAACTTCCAAAATTAGTCCTGCGGTTTGGGATGAGAACTTCCGTTTAAGGAGATTATGTGGGTACTGCAAAAGAACCAATCGCCCTCCAAttgattctgtaaaaaaaatgGCAGATACAGTTGATGTCCTGAAAGTAAAATTACCGGAATGTTATGCTGTGAAATACACTCTTCTTCGTGCTCAAAAATGGAGACGAGACTTGCAAGAAACCATCAATTTAGAGGTTCTCTCTAGTCGCTCGGGAGAAATTCTgtctttctttcaaaaatttcatgCTAAACGGTATTCAGGAGACCCATTGACAGATGACCTTCTGGCAGAATGCCGTCTCGTAATTGGGACTGCCAAAGGTATTCCGCGAGTTACACTGCTATCTTTGAAAGAAGAACTTATTCAGGGTAACAGATTTGAGATAACCCCTCCAGAGCTtaacgaaatttggaatatcGTCAACCCATTATGGATCCATTCTGAAATAGAATCCAGGCTTTACAACGGTCTTTGTTACCCTCTGAGAGGTGATTCTTCTTGCTCCCAACCCAACCTAACGTCGTTGGTTAAACAGGCCATTACAATGAAGAAATCAATGAAGAGAAAGATGATTTCCATTACTCAACCCAACCGACCAGAAGGCCCTGGTGGAAAATTGGGCcccaggaagaagaagaagaataatgttTATAAAAAGAAATCTAGCAAACAAACATTATTTCCTCATTTGGTATCCTCGGAAAACCCGACAGAAGAGCACGAACCTGAAGCCAATTGCGCTGCACCTACATGTATGAAGCCCGTGGATGCTGCAGTTGACTGGGTAATGTGCGATGGAGCCTGCAAACTATGGTTCCATATGAAATGCGTTGACTTGGACAACAAAGACGTGAATGAAGATTTTGAGTACATTTGCACGAATTGCGTATGTAACAGAGTTTGCGATCAAGTTACCGAAAGTCTTGGCTCCAACATGGAtgaataa
- Protein Sequence
- MDLRPSSSPNGKSPPRKGGKKFVFDPPPEAPVFRPTAEEFKDPLEYIKKIRPIGEKTGICKIIPPSWRNPFALDMDTLRFVPRIQRINELEARTRIKLNFNDKLTKFFALSGKTFQVPVMEKTSLDLYTLHRKVKEHGGVDFVNKEKKWSDIALSMGLMCKTAPYTLKNHYDNLIHPFLQSQAKNNEESKDDNKENFSKEDGEIDSETGEGVNKGLMKTAKGASAMRELKSLRFLGPGPKMAVCDGGVLQKGLRTRGKKIMYEFDPLAKYMCKGCKKGDIEETFLVMCVTCEDRYHHSCLIPPLSLDAPPINWRCPKCVAAEGYKPLEEFGFAQAEREYTLNEFKAMANEFKRNYFNTDPDQVEHSAVEQEFWRVVSSIDEAVTVEYGADLHVIEHGSGFPRHNQPCVSGVDPKKFDKYANSPWNLNNLPVLDDSVLRHISADISGMKIPWMYAGMCFATFCWHNEDHWSYSINYLHLGEAKTWYGVPGSYAEQFEAAMQKAAPELFESQPDLLHQLVTIMNPNDIMAAGVPVYRTDQKRGEFVITFPRAYHAGFNQGFNFAEACNFAPADWLVIGRECISHYSQLGRTCVFSHDELVCKMAIIFDTLERDMGLVLVKDLSLMVEAERLRRTRALKLGVGNAVHVDFEKLPDDERQCCVCNTTVFLSAVACPCDYTRLVCLDHITRLCSCDSSNYVMKYQLKLDILQNLLVVISSKLCGFGSWTTRVEEALHGKSEKKVSLRKLTELLVEAKEKEFPHSELVELLEYHVRRCIECSALSKALVANCSNKDNPSKITVDDLELFFQEIEKLPCSISEESAVKDILDKAKKFQNCARRVLSMKDISKSRVLKCYKMGQSLNLDLPEMQELEKKIMEFEWVDKVGFAIDAEFDLDFVSKLADDGKSLCDSPLVEKTKIKLNKYISERTPDIAIVNVQSIADMEGTIIRGPPIQSRGQTNELERSLMKVLHGDVVLYLNELEKLVAMAKQKTPESSTLKQVEHHVIVARNWKMAAEALFLKKNDPNSLMEALWPRKFVSRHLYFAKQVIKQAAGIESLLVKSDDAHYSKSAYKNALMQEFHTLSKLRLDNLRKMDTEDFGSVKCICGNSMDGTAIVCELCHTAMHLRCFKETDWTRTSKISPAVWDENFRLRRLCGYCKRTNRPPIDSVKKMADTVDVLKVKLPECYAVKYTLLRAQKWRRDLQETINLEVLSSRSGEILSFFQKFHAKRYSGDPLTDDLLAECRLVIGTAKGIPRVTLLSLKEELIQGNRFEITPPELNEIWNIVNPLWIHSEIESRLYNGLCYPLRGDSSCSQPNLTSLVKQAITMKKSMKRKMISITQPNRPEGPGGKLGPRKKKKNNVYKKKSSKQTLFPHLVSSENPTEEHEPEANCAAPTCMKPVDAAVDWVMCDGACKLWFHMKCVDLDNKDVNEDFEYICTNCVCNRVCDQVTESLGSNMDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00883577;
- 90% Identity
- -
- 80% Identity
- -