Llin019773.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- ARID2
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000009.1:17431008-17433995[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-22 4.3e-19 69.5 0.0 2 89 15 100 14 100 0.95
Sequence Information
- Coding Sequence
- ATGGATGATATGAGCAACGAAATTGACAGAAGAAAAGTGAAGAGAGAGCAGTTCATCAACGACCTCATGGGTTTCCACGCTGCAGTTGGAACTCCGTTGATGCGCTTGCCCACCATCAATGGTCTAGAGGTGGATTTGCTAGGGCTCTTTGAATCAGTGACAGGACTTGGAGGATGGGAGAGGGTCAGTGACAACAATCAGTGGCCAGACGTCGTCTCAAAGCTGGAGCTTCCCAACGCTTGTGTCAACAGTTCTGTAGCCTTGAAACAGATCTACCTTCGATTCCTCGACAAATACGAGAAGACACATTTTGTCCACAAGGTGAGGGGCGAGCCTGAAGATGAGGTAGATTTCAATATCAGGAGGATGAACAAGCAGTCGGCAAGGACACTTTATGGTGTTCCAACGACGTACAACAATGATCAGCATAGACTAACTGAAGAGCAGAGATTGCTTCTGGGGCTCAATGCATTGAGTGAACGGGATAAGTATGAAAAACTGCAGCTTTCTCTAATCTCGCCATTGCCAAATGAACAGGACTTTGCCATCAATGTATGCTCCCTTCTGTCGCTTCAAGCGTATGATCACCCTGTCAGGCTTATCAAATCCCCCCGCCTACTCGTCAACCTTCTGGCTCATGCTGGTGTTTTCTCGGACATCTACTTCAAAGATTACATGTGTGAGCTTTACCAAAAAGATCGAGGTCACGAAATAAAGAATTTTTGGGTAAATTCTCTAAAGCATGATGCACTTGTATGGATCACTAATGAGGCTAATTTCACTGGTAGCAGAGATGAGGATTGCTTGATGGTCGAATTTCCCGAACGTAGCTACATGActgaaaatttaacaaattgtGACTTCTTCATTGAGCGCGTTTGTCATATTGCGCGAATCATCGTAAATCTAACTCAACATGGAGATAATTCTGCGTTCATCGCAACTGATATGACCGCTGTGCGGTTTATTCTCCTGTGTTGTGATTGTCGGTACAAGAAAATATCCGAACTAGGTTGGGATATGTTGTATAGCATAGCTAGTAAGATGTGTATAAGGACACTGGGGTTTAAAGAAATAATGTTTATAGTGAAAGAGAATGTTCTGTCTGAGGACATTTCGGAAATCCTTGCCTCCTTGAGAGTGCTCAGTGAAATAGCCAAAGTTGATGTGAATAAGATACCTCTGCTGGACTGTATAGATCAAGAAATGTTCTCAAAACTCTGTACTTACCTGACTCTGCAGGATGTAGTTATAATTCTATGTACTCTAGAAGCACTGTACGCTCTCAGTCAGTTAGACAAAATATTCTGTGATATGATTGTCCGAACGACGGGGTCATTGAGTGTGTTAGtgctattattaaaatttagggtTCCTCTTTCTGCTAGTTTTGGAACATGGAAAAACATCAGGGTCTTAGAAACGATTGTAAGTGAagatgggacaaggaatttagcAGAAAAGGATCTTGGTGCTTTGTCAGTGAGACCGCCAGACCTTCCCTACTCATATTATAACAGTGTACCTCCCATGGAAGCCTACAGAAGAGTAGACAATATTGCAAACTGTTGCCTCACTGGTGAATGCAGAAGATCTCAGAAAGATGATGGTGGTTCTACAAGTAAAGATGTTATAACGTTGCAAACGTCACCAAGAAAGAATTCGCTTCTATGTAACGCCCTTCGTAACTGTGTTCCCAATGGAATCAAACCAGTGACGGTCAGTACAGTTGGACCAGCAATAACATTGAAAGCTCATTTGGAAGAACCAGTAAcgaaaatagtaaaaattagCAATCCAGGAAATCAAAGTCTAATAAATACTGTCAAAAACATGTCTCACATGAACCCAAGCCTCCTAAAAAATGTTGGGTTCGTTACTAAAAAGATGGTGCTTAACGGAAAAGAATTCGTCGTTGCAACTCCTATGTCGCCACCCTCAAAGTCGTCAGATGAAAGCAATTCCTCTAACAGTGATGATATGCAGGACAAGATAGTTACCAACAACCATAGTGGCTCAGAAGAGAGTATGGACTCGGTTAAAAACAATGGCgaaatcattaaaaaagaacttgTTAGAGATGGAGAAAATGAAGTATCGGCTACAAAGGTGGATGTGCTCGATTCCCAACTGTGTGATGTTGGCGGTAGAAAACAAGTGGCAGATATGAAGGTTGGTGTGCTTGAATCCAAACGTGATGGGGGCGCGGATAAGCCCGAGAAAATGGCGCCTGTAATGAATGGAATCCAGGGAGAAGTCAAAGTGAATGGGGTGCCAGAGCCTGATGACTTCCTGTGCGAATGGAGAGGGTGTCTGAGGAAGTTCAAAACACCTAATGGTGTTTACGTTCATATTTGCTCTTCGCATTGTCCTCAGTCTATGTTGGAAGGTAAGTGTTTGTGGGGGTCATGCAATGCGGGGAAGATGGTTTACCGAATCCTGATCAAGCACATCCAGAGAGAGCACTGTCACTCAGAGACAATGTTGCCTATCAAAGTTCGGGCAGCAATCAGACCCCGTCCTCATCCTTCGCAAGCCAGAGGGCAGCCTCCACTGTCCAGCTCTGCCCCACCCCCGTTGATGCCTCCTCCTTTACCTCCGTCATCAGCACCTGTGGTGATGACGGCACCCGCACCTGAGCAGTTCAACCCCAGCATGATTCCTCCTCCTGCACCTCAGATGCTGCCACCACCACCGCAGCAACATCCTCCTCCTCCAGTTCCTCCTCTACCCTCGCAGGCGCCGTATGGGGGGCAGTTTCCTCCAAGGTATTATGGCCCTCCACCACTGGCAACCACCCCTGCGGGTGACAGAATAGCTGAAAGCGTTCGCCTAACATCTGCTCTTATACTTCGCAACCTCGCCGTCGCCTGCCCCACAGCGCGACGGCGCCTTCTCCTTCACGAACAGCAAATAGTCGAAGCTGCTGCATTGGATTCCGAAGCATCTAGAGCTGCAGCTGAATGTCTTTCCTACTTATGGACTTGA
- Protein Sequence
- MDDMSNEIDRRKVKREQFINDLMGFHAAVGTPLMRLPTINGLEVDLLGLFESVTGLGGWERVSDNNQWPDVVSKLELPNACVNSSVALKQIYLRFLDKYEKTHFVHKVRGEPEDEVDFNIRRMNKQSARTLYGVPTTYNNDQHRLTEEQRLLLGLNALSERDKYEKLQLSLISPLPNEQDFAINVCSLLSLQAYDHPVRLIKSPRLLVNLLAHAGVFSDIYFKDYMCELYQKDRGHEIKNFWVNSLKHDALVWITNEANFTGSRDEDCLMVEFPERSYMTENLTNCDFFIERVCHIARIIVNLTQHGDNSAFIATDMTAVRFILLCCDCRYKKISELGWDMLYSIASKMCIRTLGFKEIMFIVKENVLSEDISEILASLRVLSEIAKVDVNKIPLLDCIDQEMFSKLCTYLTLQDVVIILCTLEALYALSQLDKIFCDMIVRTTGSLSVLVLLLKFRVPLSASFGTWKNIRVLETIVSEDGTRNLAEKDLGALSVRPPDLPYSYYNSVPPMEAYRRVDNIANCCLTGECRRSQKDDGGSTSKDVITLQTSPRKNSLLCNALRNCVPNGIKPVTVSTVGPAITLKAHLEEPVTKIVKISNPGNQSLINTVKNMSHMNPSLLKNVGFVTKKMVLNGKEFVVATPMSPPSKSSDESNSSNSDDMQDKIVTNNHSGSEESMDSVKNNGEIIKKELVRDGENEVSATKVDVLDSQLCDVGGRKQVADMKVGVLESKRDGGADKPEKMAPVMNGIQGEVKVNGVPEPDDFLCEWRGCLRKFKTPNGVYVHICSSHCPQSMLEGKCLWGSCNAGKMVYRILIKHIQREHCHSETMLPIKVRAAIRPRPHPSQARGQPPLSSSAPPPLMPPPLPPSSAPVVMTAPAPEQFNPSMIPPPAPQMLPPPPQQHPPPPVPPLPSQAPYGGQFPPRYYGPPPLATTPAGDRIAESVRLTSALILRNLAVACPTARRRLLLHEQQIVEAAALDSEASRAAAECLSYLWT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00386078;
- 90% Identity
- iTF_00145333;
- 80% Identity
- -