Llin002343.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- Kdm5d
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000001.1:35828458-35833695[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-27 2.9e-23 82.8 0.0 2 89 62 146 61 146 0.93
Sequence Information
- Coding Sequence
- ATGCCGACCCGAATGAGCCGAACCGAACGTGTTGCCCAGCACAGGCCGACCGGCCTGCTTCAGAATTATGTGGACGCACCCTTGGGGGAGGATTGGCATCCCCCCTTTGCTGTAGATATTGAACAGTTCAGATTCACACCCAggatacagaaaataaatgaaCTTGAGgcTCACACTAgaattaaactaaattttctggATCAAATTGCGAAGTTTTGGGAACTCCAAGGATCTCCATTGAAGCTTCCATCtgttgaaaaaagaattttggatttttacacTCTTCACCAATTAGTGCAAagagaagGGGGAGCTCATAGCGTTACCCGTGgaaaaaaatgggggaaaatagCTATGCAGATGGGCTTGTCCAAGGATAACAGAGGTTCTGCCACTACTCTCAGGTCGCATTATGAGAAGATTTTGTTGCCATATGACATATTTTTGTCACTCCAGGATGCCAAGGATGGACTGAGCGTTGTAAGTATTGGTTTTTAA
- Protein Sequence
- MPTRMSRTERVAQHRPTGLLQNYVDAPLGEDWHPPFAVDIEQFRFTPRIQKINELEAHTRIKLNFLDQIAKFWELQGSPLKLPSVEKRILDFYTLHQLVQREGGAHSVTRGKKWGKIAMQMGLSKDNRGSATTLRSHYEKILLPYDIFLSLQDAKDGLSVVSIGF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -