Llin017002.1
Basic Information
- Insect
- Lygus lineolaris
- Gene Symbol
- KDM5B_1
- Assembly
- GCA_030264115.1
- Location
- JAEMON010000007.1:26483322-26487012[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5e-21 1.7e-17 64.3 0.1 3 88 86 167 84 168 0.93 2 2 1.8e-13 6.2e-10 40.1 0.0 4 88 201 273 200 274 0.92
Sequence Information
- Coding Sequence
- ATGGAAGTCGTGCCAGTGGAACACTTCGAATTCCAACAACCGTCCGAAGCACCAGTTTTTGAACCATCGATAAAAGAGTTTGACGATCCAATTTCCTACATCAGTAAAATCCGGCCGGTCGCTGAGAAGTACGGCATTTGCCGGATAATACCACCGGAAGAATGGCGTCCGCCGTTTTCGGtagatttgaacaaatttacgtTCAATCCTAGAGTACAACCTTTGAAAGAGCTCGAAGCCACAACTCGAGTCAAACTCATGTTTTTACAGAATCTTGCTGAATTCTGGGAGTTGATGGGAACATCCTTGAAACTCCCAGTTGTGGAAAAGAAGGTTCTAGATTTGTACGTTTTAGATCAATTGGTCAAGAAAGAAGGTGGTTTTATAAATGCTACGACCAGTAGGAAATGGAGTTACATTTCGCACACCATGGGATTTCAACCGGACAAAAATCACGGAATGGCTATTAAATCGCATTACGAGCGGTGGTTGTGTCCTTATAATACTATTCAAAAGACAAATTTTGACAGACGACGAAGAAAAAAGGGTGTTGAAGTCCAGACCGGGTCTGTCAAGAGAGGGGTCAATCCTGGGTGCATTTCATTCAGTAAAAGGTTGTGTGAGTTTTGGAGGCGGAAAGGAATGCGTTTGAGTTGGCCACTCATAGATAAGAAGAGTGTGGATTTATTTGCGTTGCATGAGGCCGCTTCAACAGCTGGTGGTCTTGTAGATTGGTGCTCTATAGCCAGAAGCATGCagttttcggaaaattctgcCTCAGATCTTAGACTCTGCTACACTAAACTTATAAAACCTTTCGTGGAGAGCGGGGGTGAGGAGAGTGTGCAAGACGCAGACGTCTGCGAGAAATGCATGTTGAACGACAATGCAGAAAACATAGTAGTATGTGTAGGGTGTGGAACAGTTTATCATTTAGACTGTCTGCGCCCTCAATTGCTCGATTATTCCAAGGTTCCGAAAGGGAATTGGAACTGTTACGCTTGCATCAAGGAGAAACTCAACAAGTCCAGGGAACCTTACGGATTCGACCAGGCTGAGAAACACTACACTTTGGAAGAGTTTGGTCAGATGGCAGTACAATTCAAGGAAGAGCACTTTGGCATGCCGTGTCTCAGTGTCCCGATTGAAGAGGTAGAGAAGGAGTATTGGAGGCTTTTAACTGATCTGGAGCATGACACAATGGTGGAGTATGGAGCTGATATCCATAGTGTTGACCATGGGATGGGGTTCCCATTACGCGATGAAGCGAATTCCGTGAAAATGGAGACTGACGAGTACACCCAATCGAAATGGAACCTCAATAATATCCCAGTGATCGAAACGTCAGTGTACAGCCATATTGGCACGAACGTCCCAGGAGTGACGATACCCTGGATGTACATTGGGATGTGCTTCTCAACGTTTTGCTGGCACATCGAAGATCACTGGAGTTATTCCATTAATTACTTGCATTGGGGCGAGCCGAAAACCTGGTACGGGATTCCAGGGAAAGACGCCGAATTGTTCGAGAAGGTCCTGAAAAACGTAGCTCCTGTTCTGTTCGACGGCCAACCCGATCTGCTTCACGACTTGTCAACCACAGTAAATCCCAACACACTCATGAAACACGGCATGAAGATTTTTCGCACTGACCAGAAAGCAGGCGAATTTGTCGTTACCTTTCCAAGAGCCTACCATGCTGGTTTTAACCAGGGGTTCAATTTCGCTGAAGCTGTCAATTTTGCTCCAGCTGATTGGATACCGATTGGGCGAGCATGCATTGACCATTACGCCAGCCTATTACACGTATGTGTTTTCTCCCACGACGAGCTCATATGCAAACTTGCTAAGAAGGGCTCCTCTCTAGATCAAAGCCTAGTGAAAGCTACTTTAAAAGATATGGCGGTAATGCTTGAATCGGAAAGCAATAAGAGGAAACTAATAACAAAATCAGGAGTAACCAAAACCGAAAGGGTGATTTTCGAAAAGATCCCAGACGACAACAGACAGTGCGCTTATTGCAAAACGACTTGTTTCCTTTCTGCAGTCAAATGCAGTTGTCGTGAAGATATATTTTgtataaatgattattttaaaataaaagaaGCCTGTGGATGCCCTCCATCtaacttcattttcaaatacAGGTATGACTTGGATGAGCTATTAACGTTGATTACCAACTGCAAAGTTCACTTGGCCAAGAATTGA
- Protein Sequence
- MEVVPVEHFEFQQPSEAPVFEPSIKEFDDPISYISKIRPVAEKYGICRIIPPEEWRPPFSVDLNKFTFNPRVQPLKELEATTRVKLMFLQNLAEFWELMGTSLKLPVVEKKVLDLYVLDQLVKKEGGFINATTSRKWSYISHTMGFQPDKNHGMAIKSHYERWLCPYNTIQKTNFDRRRRKKGVEVQTGSVKRGVNPGCISFSKRLCEFWRRKGMRLSWPLIDKKSVDLFALHEAASTAGGLVDWCSIARSMQFSENSASDLRLCYTKLIKPFVESGGEESVQDADVCEKCMLNDNAENIVVCVGCGTVYHLDCLRPQLLDYSKVPKGNWNCYACIKEKLNKSREPYGFDQAEKHYTLEEFGQMAVQFKEEHFGMPCLSVPIEEVEKEYWRLLTDLEHDTMVEYGADIHSVDHGMGFPLRDEANSVKMETDEYTQSKWNLNNIPVIETSVYSHIGTNVPGVTIPWMYIGMCFSTFCWHIEDHWSYSINYLHWGEPKTWYGIPGKDAELFEKVLKNVAPVLFDGQPDLLHDLSTTVNPNTLMKHGMKIFRTDQKAGEFVVTFPRAYHAGFNQGFNFAEAVNFAPADWIPIGRACIDHYASLLHVCVFSHDELICKLAKKGSSLDQSLVKATLKDMAVMLESESNKRKLITKSGVTKTERVIFEKIPDDNRQCAYCKTTCFLSAVKCSCREDIFCINDYFKIKEACGCPPSNFIFKYRYDLDELLTLITNCKVHLAKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00145328;
- 90% Identity
- -
- 80% Identity
- -