Ltri006322.1
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- RERE
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010000953.1:1-2308[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8e-09 2.8e-06 26.5 5.8 1 34 258 291 258 293 0.92 2 2 9 1.4e+04 -6.2 2.6 6 10 345 349 344 355 0.58
Sequence Information
- Coding Sequence
- ATGGCTACAACACAAGGAGAAATTAGGGTGGGTCCTGGTAACCAGGTAAAAGATATTTATgCACGTTTACCAGAATATCGTCCAGGTATATCACCAGAATTATTATCACCAGATCCGGAACAGACACGTATACGTGAAGAATTACGTTGGGTACCAGCAATGACATTAGATTCAGATTTATTAATGTATTTACGTGCTGCTAGATCAATGGCTGCATTTGCTGGTATGTGTGATGGTGGTTGTCCTGAAGATGGTGCAAATGCTGCATCACGTGACgatacaacaattaatgcaTTAGATGTTttACATGATTCTGGTTATGATCCTGGTAAAGCATTACAAGCATTAGTTAAATGTCCAGTACCAAAAggtattgataagaaatggAGTGAAGAAGAGACGAAACGTTTCGTTAAAGGTTTACGAcaatttggtaaaaatttcTTTCGTATACGTAAAGATTTATTACCACATCGTGATACAcCAGAATTAGtggaattttattatctaTGGAAGAAGACACCTGGTGCTAATAATAATCGTCCACATAGACGTCGTCGTCAAGGCTCTTTAAGACGTATACGTAATACAAGAAATAGTCgtggtggtaataatacaacatcaaATACTGGTCGTAATATAgaaacagaaaataataataataataatcgaccATCACCACAACCTGGTAAAGAATTAGGTGAAACAAGTTCAGTAACTGAAGATGATAATTCAGAAGATGATAGTGATAGTAGAGATGCCCATTATAGATGTAGTCATTGTTTTACTACCAaTTCAAAAGATTGGCAACCAGGTGGTAAAGATCGTCAAATTTTATGTTGGGATTGTCGTAcacattataaaaaaacaaatgaattaccACCATTAACAACATCAGTTACAATTAGTGgtacaacaccaacaattgAAAGTCCTGATGCTAGTCCACAACGGATGCGTACTCGGAATAAAGCAGcaaaagaacaaataaattcgattacaacaacaaccacaacaacaacaacaactggaacaactacaacaacaacaacaaatcgtcAAAGACCTAAACGTGGTGGTACAGATACACCAGAACCTAAAACACCagttaaacaaacaacaaatggaaatggtggtggtagtaataataataataataataataataatagtagtaataataataataatggtggtggtaatggtaataataatggaaataataatgttaatagtCCTACAGAAAAATcctcatcttcatcatcatcttcatcatcatcatcatcgtcatcatcatcatcatcgtcatcatcttCAACAACCACAAATACTACATCGTCATCAACGGGTGGTAATCCAGGTACACCAGCAAAAAAGAAAGGCGGCGGTAATGGTAATGGTAA
- Protein Sequence
- MATTQGEIRVGPGNQVKDIYARLPEYRPGISPELLSPDPEQTRIREELRWVPAMTLDSDLLMYLRAARSMAAFAGMCDGGCPEDGANAASRDDTTINALDVLHDSGYDPGKALQALVKCPVPKGIDKKWSEEETKRFVKGLRQFGKNFFRIRKDLLPHRDTPELVEFYYLWKKTPGANNNRPHRRRRQGSLRRIRNTRNSRGGNNTTSNTGRNIETENNNNNNRPSPQPGKELGETSSVTEDDNSEDDSDSRDAHYRCSHCFTTNSKDWQPGGKDRQILCWDCRTHYKKTNELPPLTTSVTISGTTPTIESPDASPQRMRTRNKAAKEQINSITTTTTTTTTTGTTTTTTTNRQRPKRGGTDTPEPKTPVKQTTNGNGGGSNNNNNNNNNSSNNNNNGGGNGNNNGNNNVNSPTEKSSSSSSSSSSSSSSSSSSSSSSSTTTNTTSSSTGGNPGTPAKKKGGGNGNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00814761;
- 90% Identity
- iTF_00929516;
- 80% Identity
- iTF_00929516;