Basic Information

Insect: Lydus trimaculatus
Gene Symbol: ZNF236
Assembly: GCA_037414755.1
Location: JAZBGY010000164.1:15759-23600[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.00045 0.025 14.7 2.5 1 23 118 140 118 140 0.98

2 24 0.0007 0.039 14.1 0.1 1 23 146 168 146 168 0.98

3 24 0.0002 0.011 15.8 0.3 2 23 174 195 174 195 0.97

4 24 0.00019 0.011 15.9 0.2 1 23 201 223 201 223 0.99

5 24 0.018 1 9.7 1.5 2 23 234 255 233 255 0.94

6 24 0.00015 0.0086 16.2 4.5 1 23 278 300 278 300 0.96

7 24 0.00015 0.0083 16.2 0.7 1 23 306 328 306 328 0.97

8 24 0.00036 0.02 15.0 0.6 1 23 334 357 334 357 0.96

9 24 0.0096 0.54 10.5 4.7 1 23 367 390 367 390 0.97

10 24 5.2e-07 2.9e-05 23.9 0.9 1 23 463 485 463 485 0.98

11 24 7.9e-05 0.0044 17.1 1.6 1 23 491 513 491 513 0.96

12 24 2.1e-06 0.00012 22.0 0.4 1 23 519 541 519 541 0.99

13 24 0.0021 0.12 12.6 5.5 2 23 610 631 610 631 0.97

14 24 0.00029 0.016 15.3 0.8 1 23 637 660 637 660 0.92

15 24 1.5e-05 0.00083 19.4 1.9 1 20 666 685 666 687 0.94

16 24 4.9e-05 0.0028 17.7 2.8 1 23 692 714 692 714 0.98

17 24 0.00027 0.015 15.4 1.6 1 23 933 955 933 955 0.97

18 24 5.4e-08 3e-06 27.0 1.8 3 23 969 989 968 989 0.98

19 24 5e-06 0.00028 20.8 5.0 1 23 995 1017 995 1017 0.98

20 24 7e-06 0.0004 20.4 0.9 2 23 1026 1047 1025 1047 0.96

21 24 0.17 9.6 6.6 4.5 1 23 1053 1076 1053 1077 0.93

22 24 0.00015 0.0085 16.2 2.7 2 23 1244 1265 1243 1265 0.97

23 24 0.0003 0.017 15.3 0.2 1 23 1271 1293 1271 1293 0.96

24 24 4.3e-05 0.0024 17.9 1.8 1 23 1299 1322 1299 1322 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.00045	0.025	14.7	2.5	1	23	118	140	118	140	0.98
2	24	0.0007	0.039	14.1	0.1	1	23	146	168	146	168	0.98
3	24	0.0002	0.011	15.8	0.3	2	23	174	195	174	195	0.97
4	24	0.00019	0.011	15.9	0.2	1	23	201	223	201	223	0.99
5	24	0.018	1	9.7	1.5	2	23	234	255	233	255	0.94
6	24	0.00015	0.0086	16.2	4.5	1	23	278	300	278	300	0.96
7	24	0.00015	0.0083	16.2	0.7	1	23	306	328	306	328	0.97
8	24	0.00036	0.02	15.0	0.6	1	23	334	357	334	357	0.96
9	24	0.0096	0.54	10.5	4.7	1	23	367	390	367	390	0.97
10	24	5.2e-07	2.9e-05	23.9	0.9	1	23	463	485	463	485	0.98
11	24	7.9e-05	0.0044	17.1	1.6	1	23	491	513	491	513	0.96
12	24	2.1e-06	0.00012	22.0	0.4	1	23	519	541	519	541	0.99
13	24	0.0021	0.12	12.6	5.5	2	23	610	631	610	631	0.97
14	24	0.00029	0.016	15.3	0.8	1	23	637	660	637	660	0.92
15	24	1.5e-05	0.00083	19.4	1.9	1	20	666	685	666	687	0.94
16	24	4.9e-05	0.0028	17.7	2.8	1	23	692	714	692	714	0.98
17	24	0.00027	0.015	15.4	1.6	1	23	933	955	933	955	0.97
18	24	5.4e-08	3e-06	27.0	1.8	3	23	969	989	968	989	0.98
19	24	5e-06	0.00028	20.8	5.0	1	23	995	1017	995	1017	0.98
20	24	7e-06	0.0004	20.4	0.9	2	23	1026	1047	1025	1047	0.96
21	24	0.17	9.6	6.6	4.5	1	23	1053	1076	1053	1077	0.93
22	24	0.00015	0.0085	16.2	2.7	2	23	1244	1265	1243	1265	0.97
23	24	0.0003	0.017	15.3	0.2	1	23	1271	1293	1271	1293	0.96
24	24	4.3e-05	0.0024	17.9	1.8	1	23	1299	1322	1299	1322	0.98

Sequence Information

Coding Sequence: atggCACAAGAGAATCCAATTAATGAGAAATTACCAACATTGCTAGCATTACCAATACAAACATACGATAGTATTGTACAATTACCTGATAATATACGTGTAGTATCTGATAGTGTTATCAAATCATTGTCAGaaaattctttttatattattagcCAAAATGAtgTAAATACCAACGATAATCTTGTACAACTattgaataacaacaataataacaacagtggctctttgatgttgttgaacaTTCCAATAgagacaaaaacaaatcaaaatattgacGAAAACATTAAATCGACACCGTTAGATGTGATTATTGAGAAAACTAATGAGAATATCAAACCAATATCTGTGTATCGTTGTACAAAATGTGATGaagaatttaaaaagtttacaTTATATAGAAAGCACATTATGTGGCATAATAAtgtgaaaaaattcaaatgtgATAAATGTTCAATTAGTTATAACATTGAAGGGAATCTCAACATACATATGGCTGTACATGGTGATGGTAAACCAACATGTCCAATATGTAAAATATCATTTCAACGATTAGCTAGTTTAAAATCACATTTAATGCTACATCAAGTTGAAGAATTATACAAATGTGAAGAATGTCTAGCTGAATTTGAACGAGAGgaGGACCTTAGTAGACATCTACAAACACATTTGAGTAGTCCGAAAGAACGAGACAGTTTGATTTGTTCATATTGTCGTGTTAAATTCACCGATTCAAATCAATATAAGGAACATGTAGCACATCATGTTAAAataaaaaaattgatattctCCGGACGACGTACACGAAAAACACACAACCTCGAATACAATCATTGTTGTAGTGTTTGTCTAAAAACATTTTCTAAAGCATCACTATTAGAACGCCATACACGTGTACATAGTGGCGAGAAACCtttcatttgtCAATTCTGTAATCGCGGTTTCAATCAGAAAGGCGCCTTACAGatacatttaacaaaacacACCGGTATTAAACCGTATCGTTGTACATTATGTTCAGCTGAATTCTATCAAAAAGGTAATCTACGTGTACATGTTGAGAAAACACATACAGCACCATCACCAGGTGTTAAAACGTATAAATGTTCACATTGTtcgtgtatttttaaaaaagtagCAAGTTTAAATGTTCATATAACAAAGACACATGCTAATAATCAAAATCGTTCAAATAATATGGtagatttaacaaataaattgaaattaatcgaacaaaatgatggtaataaacaaatgataatcaataataatgaacataatgttgatgataataattataattatgtacGTGTTGCTGAATCGTTTTCTGATGGTACAACACGTCGTTATTTGATTAAACAGAAGAGAATTAACGATATTAGggtttatatttgtaattattgttcgaaagaatttaaaaaaccATCAGATTTGATCCGACATACACGTGTACATACGCGAGAACGAccatttttgtgtaaatattgcaatatttcgttttcattaaaatcaacgtTATTATCACATGTAAAAACGCATACTGGGAAGTGCCATTATAGTTGTCCGGTTTGTTTGAAGAAATTCTCAACAGCACGTGCTTTAAATATACATTTAAGAACTCATCCGGAACGTTTGACGCAACCATACAAATGTAATCCATGTAATAAATGGTTTAATTCGATACAAAAGATGCATGTacataaagaaaaacatcGTAAACAAGAAGAGAGTTTAATGAATCAACCGAAAATTGAAGagaatgtaaatattgaattaccCAACATTACAATACAATCAACTTCGATTCAAATGAATGATGAACAAAACGAATGTCAAATatgtaaaatgaaatttgttaaattgcaTCATTTGAAACAGCATCTCAATAcacatttaattgataaaaattataaatgtgaAGATTGTCCAAAgTTATTTTTCACACAAGATGCACTAAAAGAGCATAAACTATTCGATCATAGTAATCCGAAATCATATCATTGTAGTGATTGTGgtagaaaatttacaacattatcattattaaaacgacataaattaaatcaaaatcaaccaTATACATGTTCGTATTGTGATAAAAGTTTctgtagtttattattatatcgtCGTCATATTGCAATACATaaaaatgatggaaattttgatggaaatgaGAAGAATCCATCAATTATTGATCCGGATAGTATGATAAATGCTGataatttactaattaataataaacaaaacaatattGAAAATCAAGTAAGTTCAGCATTAGATCAACAATTGTGTCAGCTGATTCCAAATCAAATCCAAATTatatctaatgataataacagtaataataatactaataataataaaggtaaAGAACAGGttcaaattcttatcaattgtgATGATTTACAGTTTAGTGATAATGGGAATTTATATGCAAAGAATGATGAAGGCGCCGATTCAACATTCTTCAATCAATTAGATTTTCAAGATGGTAATGTTTTCAATAttgacaatttaaataatgaatttgaacaaatattaaatacaacacCAAATCAACTGATCaatgatgttaataataaaacaggtGAATTGaatgaagatttattaaataatacagCGGATGGAGGAAATGTTATTGCGGTAACTCCATCACCATTaacgatttttaataataatttagaacacgatttgaatgatttaagtgttgttaataataataataaagaagataaattcgaaacaacaaaatctgttagtaataataataataataataataatgataataaacgtaaatatgTTTGTCCATATTGTAAAcgtacaattacaaataaatcaacatattCAAAACATTTAGATAATCATATGAAACGTAATAAAAAACTTGAACCTGTCTTACGtatatgtaattattgtaataaaacatttaaaaaacaatcagatTTAATACGTCATATACGTACACATACAGGTGAACGTCCATTCTCATGTGATAAATGTGATAAATGtttctcattaaaatcaacattattatcacatCAACGTACACATAATccaataaattcaaagaaaatctCATGTAATATATGTAATTcatcatttacaacaaaatcaagttTAAAAGTACATATGAGTCTACATACAGGTATTAAACCATATGAATGTGCATATTGTTCAATCAAATTTCGTACATTATCACATAAAAAATATCACGAAGCATCACAACATCATtctaatattaacaacaataacaacaacaacaacaatgataataatgaagaagatttattacaaataaaaaatattaatgataatctattagataatggtaataatttattaaatgataatcaacaaGATCGTATTACATTggcaatttcaacaaataatcaacaattagatgaGAATATTTTGGTTGTACAAGaatcattacaattaccatcattaataaatgataataatttgaatgaaacaGTACAATTAGAACcgaatattttacaacaatggtcgaataatttattattacaagacCCATTATTACAGacatcatcattaatacaaTTAGATGATGGTacattattgaatataaaaacaataaataatgatatagATTTGGTTAATAATCAGAATTTAGttgaaaatcaattgattgatccacaacaacaacaacaacaacaaccacaacaaccacaacaagtTGCTACAGTTAATGGTAAACCGAGAAATTTAAAATGCGATATTTGCCATAAAATGTACGCATCTAAAGATGTATTGAGACGTCATCGTAAAAATCATGGCATTAATAAGAAATATCCATGTGATAAATGTGATAAAGGTTTTGATACTGAAGATGCATTAGATAAGCATAATAAATTACATGCAGGCTATAGACCATATACATGTATGTAttgtaataatagtttttcaaaacaacaaagtcTATCAGCACATATGAAAAGgaTACATAAAATATCTAATACTTTCTGGaaagatgatttatttttcacATTATCATCTTAa
Protein Sequence: MAQENPINEKLPTLLALPIQTYDSIVQLPDNIRVVSDSVIKSLSENSFYIISQNDVNTNDNLVQLLNNNNNNNSGSLMLLNIPIETKTNQNIDENIKSTPLDVIIEKTNENIKPISVYRCTKCDEEFKKFTLYRKHIMWHNNVKKFKCDKCSISYNIEGNLNIHMAVHGDGKPTCPICKISFQRLASLKSHLMLHQVEELYKCEECLAEFEREEDLSRHLQTHLSSPKERDSLICSYCRVKFTDSNQYKEHVAHHVKIKKLIFSGRRTRKTHNLEYNHCCSVCLKTFSKASLLERHTRVHSGEKPFICQFCNRGFNQKGALQIHLTKHTGIKPYRCTLCSAEFYQKGNLRVHVEKTHTAPSPGVKTYKCSHCSCIFKKVASLNVHITKTHANNQNRSNNMVDLTNKLKLIEQNDGNKQMIINNNEHNVDDNNYNYVRVAESFSDGTTRRYLIKQKRINDIRVYICNYCSKEFKKPSDLIRHTRVHTRERPFLCKYCNISFSLKSTLLSHVKTHTGKCHYSCPVCLKKFSTARALNIHLRTHPERLTQPYKCNPCNKWFNSIQKMHVHKEKHRKQEESLMNQPKIEENVNIELPNITIQSTSIQMNDEQNECQICKMKFVKLHHLKQHLNTHLIDKNYKCEDCPKLFFTQDALKEHKLFDHSNPKSYHCSDCGRKFTTLSLLKRHKLNQNQPYTCSYCDKSFCSLLLYRRHIAIHKNDGNFDGNEKNPSIIDPDSMINADNLLINNKQNNIENQVSSALDQQLCQLIPNQIQIISNDNNSNNNTNNNKGKEQVQILINCDDLQFSDNGNLYAKNDEGADSTFFNQLDFQDGNVFNIDNLNNEFEQILNTTPNQLINDVNNKTGELNEDLLNNTADGGNVIAVTPSPLTIFNNNLEHDLNDLSVVNNNNKEDKFETTKSVSNNNNNNNNDNKRKYVCPYCKRTITNKSTYSKHLDNHMKRNKKLEPVLRICNYCNKTFKKQSDLIRHIRTHTGERPFSCDKCDKCFSLKSTLLSHQRTHNPINSKKISCNICNSSFTTKSSLKVHMSLHTGIKPYECAYCSIKFRTLSHKKYHEASQHHSNINNNNNNNNNDNNEEDLLQIKNINDNLLDNGNNLLNDNQQDRITLAISTNNQQLDENILVVQESLQLPSLINDNNLNETVQLEPNILQQWSNNLLLQDPLLQTSSLIQLDDGTLLNIKTINNDIDLVNNQNLVENQLIDPQQQQQQQPQQPQQVATVNGKPRNLKCDICHKMYASKDVLRRHRKNHGINKKYPCDKCDKGFDTEDALDKHNKLHAGYRPYTCMYCNNSFSKQQSLSAHMKRIHKISNTFWKDDLFFTLSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -