Ltri010368.1
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- MYRF
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010002597.1:1-7263[-]
Transcription Factor Domain
- TF Family
- NDT80_PhoG
- Domain
- NDT80_PhoG domain
- PFAM
- PF05224
- TF Group
- Unclassified Structure
- Description
- This family includes the DNA-binding region of NDT80 [2] as well as PhoG and its homologues. The family contains Swiss:Q05534 or VIB-1. VIB-1 is thought to be a regulator of conidiation in Neurospora crassa and shares a region of similarity to PHOG, a possible phosphate nonrepressible acid phosphatase in Aspergillus nidulans. It has been found that vib-1 is not the structural gene for nonrepressible acid phosphatase, but rather may regulate nonrepressible acid phosphatase activity [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.24 1.7e+03 -1.3 0.1 128 148 38 58 20 92 0.72 2 4 0.23 1.6e+03 -1.2 0.5 53 124 242 313 195 326 0.64 3 4 3.6e-36 2.6e-32 112.2 2.4 2 180 352 498 351 498 0.95 4 4 0.24 1.7e+03 -1.2 0.2 120 140 745 764 689 769 0.79
Sequence Information
- Coding Sequence
- atgGATGTTAGTGCCGATTTGGCTTTACAAGCAATTTTAGgTCGTACAAGTGATTTTGTTAATGGTATTGATAATGAAGCATTAGATTTCTCACAATTagaagattttattaataatgaaaatacacaaaataataataattattttaatgaatcattaaatacaacaacaacaacaacaacattaacaacaacagcaacaacaacaacaacaccaccaacaacaggaaaattattaaatgttattatcgaaaataataaaagaaatacagGGCATTCATTACCTGAAAGTCCACCGGATAGTAGTTCAGAACATCCATACAGTCCACAAGATGGTTGtgatccaacaacaacaacatcagcaacaacaacaacaacaaatgataacaCGAATGTGTATACAACATTAGGaccaacaatttataaatcaacattacaacaatctaATCTTATCAATCCGTTATTGGgtgataatttgatattaggctctcatattgttgttaatgatacAAATACAGAATTTaccgaacaacaacaacaacaaacaaatgataatctaatattaactgataataatcgtaatttgTATCCTAAACCTGATGATCATCTAgtccatcatcaacaacatttgaattatcatcatcatcatcatcatcatcatcaacatggGTTAGATGTAGCCCAAACAACATTAACACGTAATGATCTAGATTTACCTGTAGTTTATACAAATCTACAGAGTGTCTcgaaaaaacgtaaattatcccaagataataataataataatagtccaTTAGTTAAAAGTGAACCAGAACATTGTACAACAAGTCAATTAAGTCCTACTGGTCcattatcaacatcaatagatgatgattatacaacaacatcatcggATGCATGTTTATCAGAAACACAATATCAATGTATACgtttcaatcaatttcaacaatcacaATGGCATTCTTTATGTGATCAAAATTTGACAGAACTTCCAATACCACATTATCGTGTTGATGCTGATAAaggttttaatttttcaaatgctGATGATGCATTTGTTTGTCAAAAAAAgaatcattttcaaattacatGTCATGTACAATTATTAGGTGATgcacaatttgttaaaacacaAGATGGTTTACAGAAAATCTCTAGTTttcatttacatttttatggTGTTAAACATGATTGTCCAACACAAACAATACGTGTTGAACAAAGTCAAAGTGATCGTAGTAAAAAACCATTCCATCCTGTTCTAATCGAATTGGTGAACTCCCAGGTAACGAAAGTAACAGTCGGTCGATTACATTTCAGTGAAACTACATCGAATAATATGAGAAAAAAAGGTAAACCCAATCCAGAACAGAGATATTTTCAGttggtGGTAGGTCTTCATGCTCATACAATCAACGGTAATTTCCCTGTTATTAGTCATGCAAGTCAAAAGATCATCGTTAGAgcATCAAATCCTGGCCAATTTGAGAGTGATGTTGAATTATGTTGGCAAAAAGGTCAAGTTCAAGATAGTATCTATCATAATGGTAAAATTGGTATAAATACAGATCGACCAGATGAATCATTAGTTGTACATGGTAATATCAAAATAACTGGACATATAATACAACCGAGTGATATACGTGCAAAAACGAATATTGTTGAATGTGATCCACGCGAACAATTACGTAACGTACAGAAATTACGCGTTGTTAAATATGATTATGAACCAACGATTGCAtcacaattaaatcaaaataccCAACATTCAGATACTGGTGTTATTGCACAAGAAGTTGCCGAAATTCTACCAGAAGCTGTCCAACCAGctggtgatttattattagataatggtgattcaattgataatttcttaGTTGTTAATAAAGAACGTATATTTATGGAGAATATTGGTGCTGTTAAAGAATTATGTCGTGTTACTGATAATTTAGAAACACGTATTGATCAATTAGAACGGATTAATCGacgtttaaataaattaaaacgtgGCGATAGTCTAAAATCAAACAGTACAGtaAATAGTTGGAAAAACTCGAATTCATTGAAATGTTCCAAACATCATAAATGCAATAAAGATGATGAATTatgttcaaataaatttatacaaattattattgttgtattagtGTTAATTATGGCTTTTTGTTTAGCAGCAATTACAACTTTATATCTACTAGAAACGGCACGTCATAATCATTTTATACAAAGTAATTTACAAGcagcacaacaacaacaacataatcgacaacaacaacaacaacaatatcatcgTATGATAACAAAGAGaccaattaaaaatacaaaaaat
- Protein Sequence
- MDVSADLALQAILGRTSDFVNGIDNEALDFSQLEDFINNENTQNNNNYFNESLNTTTTTTTLTTTATTTTTPPTTGKLLNVIIENNKRNTGHSLPESPPDSSSEHPYSPQDGCDPTTTTSATTTTTNDNTNVYTTLGPTIYKSTLQQSNLINPLLGDNLILGSHIVVNDTNTEFTEQQQQQTNDNLILTDNNRNLYPKPDDHLVHHQQHLNYHHHHHHHHQHGLDVAQTTLTRNDLDLPVVYTNLQSVSKKRKLSQDNNNNNSPLVKSEPEHCTTSQLSPTGPLSTSIDDDYTTTSSDACLSETQYQCIRFNQFQQSQWHSLCDQNLTELPIPHYRVDADKGFNFSNADDAFVCQKKNHFQITCHVQLLGDAQFVKTQDGLQKISSFHLHFYGVKHDCPTQTIRVEQSQSDRSKKPFHPVLIELVNSQVTKVTVGRLHFSETTSNNMRKKGKPNPEQRYFQLVVGLHAHTINGNFPVISHASQKIIVRASNPGQFESDVELCWQKGQVQDSIYHNGKIGINTDRPDESLVVHGNIKITGHIIQPSDIRAKTNIVECDPREQLRNVQKLRVVKYDYEPTIASQLNQNTQHSDTGVIAQEVAEILPEAVQPAGDLLLDNGDSIDNFLVVNKERIFMENIGAVKELCRVTDNLETRIDQLERINRRLNKLKRGDSLKSNSTVNSWKNSNSLKCSKHHKCNKDDELCSNKFIQIIIVVLVLIMAFCLAAITTLYLLETARHNHFIQSNLQAAQQQQHNRQQQQQQYHRMITKRPIKNTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -