Ltri003183.1
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- CSRNP3
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010000356.1:45158-49774[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.32 4.5e+03 -3.0 0.1 59 93 144 178 127 204 0.41 2 2 5.3e-103 7.5e-99 329.7 8.7 1 218 270 481 270 481 0.95
Sequence Information
- Coding Sequence
- ATGGGGTCAAATGGATCGATTATAAAAGACAACAGCAGTAgctttttaaaagaaattgaaacgaCGAATCCTGTTGAATTGTTAAATGCAAATCTTGTTGATAAGCCTTTAAGTACAAATAACGAAGATTTGAacgaatataataatattgagCGTAAtgattctaaattaatttatacagAACCACAATCAAATCAAGCAATAGATAatggtaatgataataataataaagaatcaTGTGTGTCTGAAATTAATACATCAAtgaccacaacaacaacaccatcagtAACAACAAATGTAGAAAATGTAAATGATGGTGAAGATTCAGCAACAGAAAGCTTACCACCAACTGAAGAACTAACAGAAGAACCCCATGATCGATCGGATGGTTCCGATTCTGGTCTAGGCTCTGAATTATCTGAAGAACGTCGAGAAACTATagcaacaacagtaacaacaacagcaacaacaaatttagttGAAAGTGATAGTGAGACATCATTTTTAGATCGTATTGATGATGCTACtacacaaaatataaatagtaatattgttgattttgatgatgatgataaagtgcaagattttatcattttaccATCAACTAGttgtaatgaaattaataataaatcagatACTTCTGAtgttaataaagaaacaaatccAATTGAAAAAGATATAAGTGATATCTTAGATGCAGcacaaccaacaaaacaattactaccattaaaaagtaatttaaaaagaaagttATCAAATggcgatgatgatgatgatgatgatgttaatgatgGTCAACCAAAATGTAAGAAAAAACGTGGAATATCATTTGATAGTGTTACtgtgttttattttccaaGAGCCCAAGGCTTTACATGCATCCCCTCACAAGGTGGGTCAACATTAGGAATGGGAGCACAACATACACACatgagaaaattttcaattgttgaacATGCAAACGAACAACGCCGTATCCATcgacaattattacaacagtTACGTTCACAAAGACATTCAACTAGTGgtaatggtggtggtgcttCATCAAGTGATGAAAGTGACAGCGAAGAAGAACCAAGTGACGCATCAGAATCTGAAATGGAtttagataattattattttttacaaccGGTGCCGATACGACAACGGCGTGCATTATTACGGGCATCAGGTGTTAGAAAAATTGACTCATATGAAAAAGATGAATGTCGTGATATTAGATCGTCACGGGAATTTTGTGGTTGTGGCTGTAAAGGGTACTGTGATCCGGACACTTGTTCTTGTAGTCAAGCTGGCATTAAATGCCAAGTGGACCGATTAAACTTCCCATGTGGCTGTTCTAGAGATAATTGTGGCAACTCTAGTGGTAGAATAGAATTCAATCCAGTTAGAGTACGTACACATTTCATACATACATTAATGAGACttgaattagaaaagaaacaagaagaagaattGAAAGCGGATAAGAAAGATGATTCCAGTTGGATGAATAATGAACGTTTGAATGccaattatcaaatcaaatcagATACGTCACAATCAAATAAAGTTTGTAGTCTTAATAGTAATGGTAACTTATTAggaaacgataataatttaaatacacgtacagatattgttaataattgtgtacATGATTctggtaattttacaaatttacattaCGGTGCCCCAGGTGAAGGTCCTGGACAAATTACTACAACACATCACAATCCAACAACTACCGGTTTTACAGATTTACCAGCACGTGAAGACTCGCTAGATCTTTATACATTTCGTGAAGATTGGTATGGGGATGATACGACACGGGATAGtcctattgttgttggtggtggtggtggtggtggtgaaagGCAAAAACAACACCCCCACCAATCATTCCCACCTACTCCTGGCCAGGCTTTCCATTTTACCGATCCTAGGTTTTCCGATGTTGGTTTTCCAACCAGTACCTCCCCTTATCCATCCAATCAATACACGCAGCCGTACCAGTCCAACTTTACTGACTTTGCCCCCGTCTTCAATCCATATAGTGACAGCGATAACACTACCACCACCAgtggtaatagtagtagtagtagtagtggaggtggtggcggtggtggtgttggtaataACAGTACagatggtggtagtggtagtaatGATGACGGTTGTAATGTTGGCAATGGTGAAGGAGGTGGAGATGAAGGATCTGGaaacaataccaccaccaccactgaTGTTGTCACCAACACTACTACAGCGACAACTGAAGAAGTTTATAATGtGTGTTTAGGGgctgttaataataataatacaactttATTAGAAATGTTAGCATCATTAGTTAgtaaattaaacgaattacGTGTTGTTTTGGCTAGTGGTTCGGAACAACGTGCCAATTTGTTACGTAGTACGagattgaaatttgaaattcatccATCAgattttgtggaaaatttggATCCTAATCAACATACGTTTtctgaatttgttgaaaacacAGCTTTAGGTAAAGTGAATGATGTATGGGAGAaacttaaaaataatgaaacaccACCCCATATTGTTATCGGGGCTGATACAATGGTCACTTATAATGGACGAATGTATGGTAAACCCAAAGATAAAAAAGACGCTTTCCAAACAATAAAAGAtTTAACACAAGATGGATTACCAAATGCAGTATATACAGGAGTTGTTATAAGATATAAGGATCAATTGTATAGATTCACAGAAGTTACGAATGTTTATATGTTGAAATTAACAGATGATGAAATTCTATCTTATGTTGATTCAGGAGAGCCAATgGGTAAAGCTGGCGGCTACGGTATTCAAGGCATTGCTGGTACTTTCGTTAAAAGAATCGAAGgtgattgtaataatgttattgGATTACCAATGTGCCGACTGGCCCAGTGTCTTAATAAGATCCTCAATGAAGAATAg
- Protein Sequence
- MGSNGSIIKDNSSSFLKEIETTNPVELLNANLVDKPLSTNNEDLNEYNNIERNDSKLIYTEPQSNQAIDNGNDNNNKESCVSEINTSMTTTTTPSVTTNVENVNDGEDSATESLPPTEELTEEPHDRSDGSDSGLGSELSEERRETIATTVTTTATTNLVESDSETSFLDRIDDATTQNINSNIVDFDDDDKVQDFIILPSTSCNEINNKSDTSDVNKETNPIEKDISDILDAAQPTKQLLPLKSNLKRKLSNGDDDDDDDVNDGQPKCKKKRGISFDSVTVFYFPRAQGFTCIPSQGGSTLGMGAQHTHMRKFSIVEHANEQRRIHRQLLQQLRSQRHSTSGNGGGASSSDESDSEEEPSDASESEMDLDNYYFLQPVPIRQRRALLRASGVRKIDSYEKDECRDIRSSREFCGCGCKGYCDPDTCSCSQAGIKCQVDRLNFPCGCSRDNCGNSSGRIEFNPVRVRTHFIHTLMRLELEKKQEEELKADKKDDSSWMNNERLNANYQIKSDTSQSNKVCSLNSNGNLLGNDNNLNTRTDIVNNCVHDSGNFTNLHYGAPGEGPGQITTTHHNPTTTGFTDLPAREDSLDLYTFREDWYGDDTTRDSPIVVGGGGGGGERQKQHPHQSFPPTPGQAFHFTDPRFSDVGFPTSTSPYPSNQYTQPYQSNFTDFAPVFNPYSDSDNTTTTSGNSSSSSSGGGGGGGVGNNSTDGGSGSNDDGCNVGNGEGGGDEGSGNNTTTTTDVVTNTTTATTEEVYNVCLGAVNNNNTTLLEMLASLVSKLNELRVVLASGSEQRANLLRSTRLKFEIHPSDFVENLDPNQHTFSEFVENTALGKVNDVWEKLKNNETPPHIVIGADTMVTYNGRMYGKPKDKKDAFQTIKDLTQDGLPNAVYTGVVIRYKDQLYRFTEVTNVYMLKLTDDEILSYVDSGEPMGKAGGYGIQGIAGTFVKRIEGDCNNVIGLPMCRLAQCLNKILNEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -