Ltri000547.2
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- CAMTA2
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010000037.1:38615-49756[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.6e-35 2.5e-31 107.5 1.5 40 116 2 76 1 76 0.97 2 4 0.18 1.3e+03 -1.2 0.0 26 61 211 246 202 253 0.78 3 4 0.18 1.3e+03 -1.2 1.8 12 87 1163 1244 1158 1250 0.65 4 4 0.099 7.1e+02 -0.4 0.6 4 78 1226 1305 1223 1317 0.60
Sequence Information
- Coding Sequence
- ATGTTACTCTACAGCCGTAAGAAAGTCAGATATCGTCGTGATGGTTATTGTTGGAAGAAACGGAAAGATGGTAAAACCACCCGAGAGGATCATATGAAATTGAAAGTGCAAGGAACTGAGTGTATTTATGGCTGTTATGTTCATTCAGCGATATTACCAACATTTCATCGTCGTTGTTATTGGCTTCTTCAGAATCCGGATATTGTGTTGgttcattatttaaatgttccATATCcggatgataataaattagcTGTAATAACTCCTAGTCTGGCATTATGGGCTGATAAAAAAGAGTGGACAAAAGATGAATTGGTGTCACAATTGAAACCAATGTTTTTCAGTGAAGATGAGCCTGATATAAACAACGAATTAGAAATATCGaatttcaaattacagACTGCAGAAACTGTAGAAGCTATAGTTAGTCAATTAATGGAGAAACAACGTGTTGCCCGTCAAGCAGCACttgttaaacaattagaatGTGGTTGTCCAGATTCAACATGTGCAGATGGTAAAAGTTGTTCACATCCAATGCGTCGTATAACATCAGctaaagaaataacaacaccatcatTACCTAGTTCTAGTGCAAGTACGAATTCACGTCAAACTAGTGGTACTGATAATAGTAATCAAGTAACATCAACAACTGGTACAGGTACaatgttattaacaaataataattcaccaagAGTATATTCGCGTGATACAAggaatcatcaacaacaatcgacaaataattgtaattcaagATCAGGCAATACACCACCATTAGTTTTAAGTTTATCACAATTACAAAGTAGTGGTGGtttactaattttaaatagtAATTCGGGcaattctacaaataattcaaatcatcaaaatgTGATTACACCAGTATCAGTTGCAAATTTCGTTTGTAATACAAATAGTTCGcgtattaaaaatgaatcgCGTAATAATcatttagttttaaaacaagaaattatgGATACAAatccatcattatcatcatcatcatcatcgccatcaccatcatcttgTAATCATCAATCAACGAaacaagataataaaaataaacgtgaAGGGATGGAAATTAACGATAACTTACGACAATCAGTATTCGATAGTGGTCCATATAATcgacaacagcaacaacaacaacaacaacaagaacgatcacaacagcaacagcgacaacaacaacaacagcaacaatcaCCATCACAATCACCTCAACAGccacaacaacaccaacaacatcaGACTGAAGTGGTAATGACTAGTGCCCCATCAACACCATCCAAACAAATGGATACAAGTCATGATGAAGTAGTTGATGagtttaaacaacaaaatttttgtggTGATACAGTCGTATTACTTGCTACTGATTCGAGCGGGTCTCTAATCAGTAAAAatGCTTTTGATATGTTGGGTGAATTTCCCGATTTAGAAGCATTAGATTCTGGCCAAACTGGTTTATTAGATGTTCATCATCCGTCcgaaacaaatcaacaagaaaaaacaacaacaatgacaaattcaacaaataataacgaaaacaataatggtaataatcaATCGATGGAAGGTTCAGCAAAAATTACCGATTATTCACCGGAATGGGCATATCCGGAAGGTGGTGTTAAAGTTTTAGTTACAGGACCATGGCATTCATCTGGACCTTATACTGTATTATTTGATACATTTCCCGTACCCACAACTTTAGTCCAAAGTGGTGTGTTACGTTGCTATTGTCCAGCTCATGAAGCTGGCTTAGCAACACTTCAAGTAGCATGTGACGGTTATGTGATTTCCAACTCTGTGATATTTGAATATAAGCTGCCACCTAGAGAGGAACAGGTCGCTGCACCTGAACCAAAAATCGAAAGATccaatgataatttattaaaatttacattattacaaAGACTGGAAGCGATGGATGATCgtttacaaatcaaacaagaaCCATCTGATGGCCCAGACTGTGTGGAAGATAGTGGATTATTTTCACAAGCAAATTTCGAAGATCGTCTAGtcaatttttgtcaaaatatGACATCACGCATTTGGCGTCATGGTGAAGAATTAAGTGTTACTTGGTTTGCTAGTCATCGCGGTATGACTTTACTACATTTAGCTGCTTCATTAGGTTATTCACGTTTAGTATGTGCATTATTACATTGGCGTGCTgaaaattcttcattattactTGAAACTGAAGTGGATGCTTTAAGTCAAGATGAAGATGGTTATACACCATTAATGTGGGCATGTGTACGTGGTCATACTGAAACTGCTATAATGCTCTATAAATGGAATCATATAgcattaaatatgaaaaatataacaaatcaaacatGTTTAGAAATTGCTCgaattaataatcataatgaacttgttaaagaattagaaaaattagaattacGTCGTGATAAAGCAAATATGTTATTACATtccacaaataattatttatccGAATCACCAACAGTTATATCACCAGCTAGTTCTATTGCATCATTAAGTTCAATTGCATCAACAAGTAAATCACATGATGGTGTATTTTTACGTCCTGGTGCTGTTACAAGAAGTGAATCACAAAAATATCGCATGTTAAATCTAGATTTGGATAATGATACGAATATTATTGGTAGTAATAAGATGTTAGGATCAATGCCTAGTCCGTTATTATCAGAATCATCGGCTAGTAcacgtaataataatggacAGAAATTAGTTAAACGACCATCAATTGATAGTGGCATCCATATGAGTTGTGGCTCTGAAAATAGTAAATCCAAATCATCACgaattctaaataaacaaGATACACCGAAATTATCAAAATTCGACCGCAGTATGTCTTTGCCATTACATTCACCTTTATCGACGAGAGATAACTCGTTTGAGTGCGAATCACTTGAAAGTGGCGGACGAAAAATGGATTTCGCTCTATGCGAAATAGGGAGTGGTCCAAGAAGCAGTAGTCCACTGATTGATGTAGAAGCAGTCTCTGATGATGAATGTGACATCCACAACAACAGTACTGTAGgGGAACAAGACGCACGTGTCTTAACATTAGCTGAACAAATTATCGCTGCCATGCCTGAACGTATCAAGaatGAAAGTGAAGATATGTTGTTAGATAGTAGTCCTGGCCCACCTGAAACACTTCAATCTAATGATACTTTATCAGATGTTTTCATGGAGCCACTCCTTGATCAATCATCATCTAGTTTTGAATCAActgaattcaattttgaattctccGATCATAATTACAGGTATTATGATGTCGGCACACCTTGTTCTAGTCTAAGTCCAGCTTCTTCAAGTTGTATCCAATCACCATGTTCATTTACATTAGattcaccatcaccaccaccgaCTACTGCggatttttgtgaatttttccAAGCTTCTGGTACTGTATTTGAAAAAGATTTCTCCAATTTAACATTATCtgatcGTGAACAACGTGAACTTTATGAGGCAgctaaaattatacaaaaagcTTATCGTTCATATAAAGGACGTGTACAGCAAGAACAAGATAAGGAACGTGCTGCTGctattgttatacaaaattattatagacgttataaacaatatgcatattataaacaaatgacGCATGCAGCTATGGTTATACAAAATGGTTATCGTTCATATTGTGAACATAAACGTTTTAAAAAAAGTCAAGAAGCTGCTGTTTGTATACAAAACTATTATCGTAACTATAAAGAACAAGGGGGTGGACGTGGTAGTCGTGAAGGAACACCCGCTTCCGGACTCAAACGAACCTATTCACAAAGACGTCAACATCAAGCTGCTAGAAAAATCCAGCAATTTATGAGACAATCGAAAAACAAGTTGCAGAAAGAACGAGCCGAAAGAGAGAAGCTGGCGGTCCTGTCAGCGGATGTCCATCAAAAGTCACAGTGTCAAGGGGCCTCCTCCACATGCATCTGCCCAAATAACAgatCAGCTAGTACGAAATTTATGGACGAATTAAACGATGCCgatattaaataa
- Protein Sequence
- MLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKLAVITPSLALWADKKEWTKDELVSQLKPMFFSEDEPDINNELEISNFKLQTAETVEAIVSQLMEKQRVARQAALVKQLECGCPDSTCADGKSCSHPMRRITSAKEITTPSLPSSSASTNSRQTSGTDNSNQVTSTTGTGTMLLTNNNSPRVYSRDTRNHQQQSTNNCNSRSGNTPPLVLSLSQLQSSGGLLILNSNSGNSTNNSNHQNVITPVSVANFVCNTNSSRIKNESRNNHLVLKQEIMDTNPSLSSSSSSPSPSSCNHQSTKQDNKNKREGMEINDNLRQSVFDSGPYNRQQQQQQQQQERSQQQQRQQQQQQQSPSQSPQQPQQHQQHQTEVVMTSAPSTPSKQMDTSHDEVVDEFKQQNFCGDTVVLLATDSSGSLISKNAFDMLGEFPDLEALDSGQTGLLDVHHPSETNQQEKTTTMTNSTNNNENNNGNNQSMEGSAKITDYSPEWAYPEGGVKVLVTGPWHSSGPYTVLFDTFPVPTTLVQSGVLRCYCPAHEAGLATLQVACDGYVISNSVIFEYKLPPREEQVAAPEPKIERSNDNLLKFTLLQRLEAMDDRLQIKQEPSDGPDCVEDSGLFSQANFEDRLVNFCQNMTSRIWRHGEELSVTWFASHRGMTLLHLAASLGYSRLVCALLHWRAENSSLLLETEVDALSQDEDGYTPLMWACVRGHTETAIMLYKWNHIALNMKNITNQTCLEIARINNHNELVKELEKLELRRDKANMLLHSTNNYLSESPTVISPASSIASLSSIASTSKSHDGVFLRPGAVTRSESQKYRMLNLDLDNDTNIIGSNKMLGSMPSPLLSESSASTRNNNGQKLVKRPSIDSGIHMSCGSENSKSKSSRILNKQDTPKLSKFDRSMSLPLHSPLSTRDNSFECESLESGGRKMDFALCEIGSGPRSSSPLIDVEAVSDDECDIHNNSTVGEQDARVLTLAEQIIAAMPERIKNESEDMLLDSSPGPPETLQSNDTLSDVFMEPLLDQSSSSFESTEFNFEFSDHNYRYYDVGTPCSSLSPASSSCIQSPCSFTLDSPSPPPTTADFCEFFQASGTVFEKDFSNLTLSDREQRELYEAAKIIQKAYRSYKGRVQQEQDKERAAAIVIQNYYRRYKQYAYYKQMTHAAMVIQNGYRSYCEHKRFKKSQEAAVCIQNYYRNYKEQGGGRGSREGTPASGLKRTYSQRRQHQAARKIQQFMRQSKNKLQKERAEREKLAVLSADVHQKSQCQGASSTCICPNNRSASTKFMDELNDADIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01022212;
- 90% Identity
- iTF_00987119;
- 80% Identity
- -