Ltri001475.2
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- lov
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010000123.1:81135-87007[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-18 2.4e-15 55.6 0.0 1 44 475 518 475 519 0.96
Sequence Information
- Coding Sequence
- atgaccCAATCTCATTATTCATTAAGATGGAATAACCATCAAAGTCATATATTATCAGCATTTGAAGCATTATTACAAGCTGAAACATTAGTTGATGTAACATTAGTATGTGGTGATACATCAGTACGTTGTCATAAAGTTGTATTAAGTGCATGTTCACCATTTTTCCAACGTATCTTCTCTGAAAATCCATGTAAACATCCAgtaattgtattaaaagatTTTAATGGTTGGGAAATACAAgcaattgttgaatttatgtaTAAAGGTGAAATTAGCGTTATACAAGAACAATTacaaagtttaattaaagCAGCTGAAAGTCTACAAATTCGTGGTTTAGCTAATCAAGATCAATTCGGTGTTGATAAAgaatcaaattcaattgttaatcGAACACCAACACCATTAACATCACCAAATGATTACGATCGACCAccatattatcatcatcatccaccactaccaccaactGGACGTTATCATCCAACACCGGGTATTACAGTACGTACACCAAATGAACGAATATCACCATTCTCTCCATTATCATCTTGTCCAACAAATTATGAACCAACAGTTAAATTACCACATATGTCACGATTATCATTTCCTGAAAcattactaccaccaccaccgccaccattaCCAACACGACAAGAATGTCAATCACCAATACCAAGAAGGAAACAAGCACGGCCTAGACGGCGATCTGGTGAATTGTGTAATAGTGTACCGCAAGATTTATCATCGAAACCaccatcaacaccaccacATGAAGATATTGCAGAGAATCTTTGTATGAAAAAGACGAGAGATGATCGAATTATGGGGCGAATTGATGAAGAaccaaaaaatttaatgacaACAACGACATTATCACCATCTACAACAAATGCAataacaacgacaacaacaacaacaacaacaacgttatcgtcatcatcatcatcatcatcatcaggaTCATCGAGTTTAACACCAGTTTCAACACCGACAAATTTaataccaccattaccaccaccatcagcTACCTCGATAAGAACACCGGATCCAATTGGAAGTCCTGAAATGGATTTAAGTATGCCGAGTGTTTTAGGTGGTAGTAATAGAGAATATAGGACTTCACCACCTGTTAGTCTGCCACCTACGTTAAGTATGAaacaagaaattgataatcatTCACCGTTGCCGTTCCCACCGATGCCGTCAGTTTCTGCACTAGCGATGACACCCCCACATAGTAAatTTTTTGGTCTTGATTCGCCGTTAGGCCTCTTTCCACCTGGTCTGGATGTTAGAAATCCATTATTCGATATGACTGACCCAAGGAATACACCCGAATCCcctttattttcaaaaaagaaaatgGGTCGACCGAAAGGACAACATTCAGCACCCCGTGGTGGACCGCCACGATCATGGACCAATGCTGAATTAACTGAAGCCTTACAACATGTGTGGAATAAAAAGATGACAACAAGTCAAGCATCGCGTATTTTCGGTATACcatataattcattattaatgtATGTACGTGGTAAATATGGTAAAAGTCtcaaattagaacaattacgTAAAGATTGTATAGCTGGTCCAAATCCACCAccgattgatttattaaatatagcaggcaataataataataattcattgaaaaatgatcgtaatagtaatagtaatgatataaatgaacaattaCAACCAAATACACGACCATCAAGTACTGAAGAAccacatcaacaacaaccaccaccaccaccacatttATTCAATCCATTTGCCCATAGTTTTTATCCAGATTTTGGTACTGGTTTTCCAATACCAGTTAGTATGATACATTTATTGCCACAAAGTGAGAAAAGTCGTGACCATTATGGCCATCATCAACCACCAAcacatgatgatgattgtcATCAGAATCAAAAGGAACGtgttaaaaaagaaatggACGATGAACACGATATATTTCGACAGCCAACATTGGCTACTGTTGATGATCGACgagaattattacaacaaaatggaCAAGACTAG
- Protein Sequence
- MTQSHYSLRWNNHQSHILSAFEALLQAETLVDVTLVCGDTSVRCHKVVLSACSPFFQRIFSENPCKHPVIVLKDFNGWEIQAIVEFMYKGEISVIQEQLQSLIKAAESLQIRGLANQDQFGVDKESNSIVNRTPTPLTSPNDYDRPPYYHHHPPLPPTGRYHPTPGITVRTPNERISPFSPLSSCPTNYEPTVKLPHMSRLSFPETLLPPPPPPLPTRQECQSPIPRRKQARPRRRSGELCNSVPQDLSSKPPSTPPHEDIAENLCMKKTRDDRIMGRIDEEPKNLMTTTTLSPSTTNAITTTTTTTTTTLSSSSSSSSSGSSSLTPVSTPTNLIPPLPPPSATSIRTPDPIGSPEMDLSMPSVLGGSNREYRTSPPVSLPPTLSMKQEIDNHSPLPFPPMPSVSALAMTPPHSKFFGLDSPLGLFPPGLDVRNPLFDMTDPRNTPESPLFSKKKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCIAGPNPPPIDLLNIAGNNNNNSLKNDRNSNSNDINEQLQPNTRPSSTEEPHQQQPPPPPHLFNPFAHSFYPDFGTGFPIPVSMIHLLPQSEKSRDHYGHHQPPTHDDDCHQNQKERVKKEMDDEHDIFRQPTLATVDDRRELLQQNGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00929702; iTF_00841960; iTF_00841762; iTF_00813834; iTF_00813634; iTF_00814517; iTF_00814320; iTF_00987256; iTF_00987052;
- 90% Identity
- iTF_00929702;
- 80% Identity
- iTF_00929702;