Ltri008464.1
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- Kdm5
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010001581.1:17026-17757[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.53 8.4e+02 0.1 0.0 3 25 54 77 52 98 0.76 2 2 5.4e-11 8.6e-08 32.1 0.0 2 44 108 149 107 151 0.94
Sequence Information
- Coding Sequence
- atgacatcaaaaatagataaattggTATGTCCGGCCAAATCAAAAACAGGACcatcaacaaaacaagaaacatATTGTTACAAAGAAGAGGCCTTTGAATTTGAACCACCACCAGAAGCACCAGTATTTTATCCAACAGAAGATGAATTTAATGATCCATTAgaatatattaataaaatacgtaAATATGCTGAAGATTCTGgtatatgtaaaataaaaccaccaccaaattgGCAACCACCGTTTGCTGTCGACGTCGATAAATTAAGATTTACACCAAGAATACAAAGACTTAATGAATTAGAggCAAAAACACGtgtcaaattgaattttctcgATCAAATTGCTAAATTTTGGGAATTACAAGGTTCTACATTAAAAATACCAATGGTTGAGAAACGTTGTATAGATCTCTATACATTACATAGTATTGTTCAAAGTTtaggtatattattattattattattattattattcattattataatgataCAGTAG
- Protein Sequence
- MTSKIDKLVCPAKSKTGPSTKQETYCYKEEAFEFEPPPEAPVFYPTEDEFNDPLEYINKIRKYAEDSGICKIKPPPNWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSTLKIPMVEKRCIDLYTLHSIVQSLGILLLLLLLLFIIIMIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -