Ltri005000.1
Basic Information
- Insect
- Lydus trimaculatus
- Gene Symbol
- ARID5B
- Assembly
- GCA_037414755.1
- Location
- JAZBGY010000672.1:19905-30759[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.48 7.6e+02 0.3 0.0 37 52 118 133 114 156 0.85 2 2 1.1e-26 1.7e-23 82.5 0.1 2 89 226 311 225 311 0.94
Sequence Information
- Coding Sequence
- atgcttttctatattttacaGGATGAAGTTCTAGCAATTTCCGAAAAGGTTGTTTTACGTGTAGAAGATTTAATTACTTGGATAACAGTAGATGCTGAATGGACATGGGGTAGATTAGCTAAATGTGAAAAAGATGTTAAAGAAGCACCAGACACAGATGAAAATAAATGTACAATTAGTACACTTTCagatagttcattagatttttcTGATGTAGAAAAAGAACGAAAAGCTTTAgaaCATAATGCAGAAAATGAAGGACCATTAGTTATAATATTAAGTTATCCACGTTATTGCCGTTATAGAGCAATGATGAGACGTTTAGAAGGTGTTGAAGATGATTatcttaaatataaaattgttcgAGCACTTGGTGGTTTTACAGCATGTACAAAAAATACACgtgtattattttgtaaagatACATTCGATTATCCAGAATTAGAAGGGCATGAATTATTATGTAATCATTTAGCACCAAAATTAAAAGGACGGCCTAGAGGCAAACGGAAAAAACGTAGCGTTTCACCAGGTTCAGAAAGTAATGAATCAGAATCGTCCGTTTCAAATGTTGTTTTCCCTACGATATCAGAGAAAATTACGATAGAAGGTCGAAACGGTTTACGTTGTGATACAAGCTTAAGGCGTAGTACGAGAGCTGTTGAAAATAGTGAAAGTAAAGAATTCTTAAAAGAATTAAGTATGTTTATGAAAAAACATTATACCCCAATAGGAAAAATACCATCATTAGGTTATAAAGAAATTGATCTCTATTCGTTTTATACGAAAGTACAAAAACTTGGTGGTTATGATTCAGTAACAGCAAACCGTTTAtggaaatcaatttttgatgataTGAGTGGCCATCAAAATAGTACAAGTGCTGCTACAGTTATCCGTCGACATTATGAACGATTTTTATTACCATATGAACGACATGTTAAAGGTGAAGAACATAAACCACTACCTATATCTGAACGACGAAGACTGAAAAGTAAAAACGGCAGTAGTACTAGTGATGCTGAAACCAGTGAAGGTACATCGAGAAGTGGTAATAGTACACCTGTACCACAAACTCCAGTCACACCAGTTGAAAATAAGGAATTTAATATTCAGGTGAAGACAGAAAGTAAAACATCATCTTTGCGGAGTATACGAGTTAAATCTGAACGacaaaaagagaaacaaattgataaatcaaataatagcaataacaatggtgaatcaaataattgtgaaaGTATTGAAATAgttaaaactgaaaatgaaACTAGTGAAActgataatattattaaaactgaaaatattgtaataaaacctGATAAGGATGCTGAACCGTTAACATCAGCAATTGCACCAATTGTACAGAAATTACCACCAGAAAAATCACCATCACCAGTTGAAGGTAAAGAAAATATACCATTAATAGAAACTGGTGATATACCAAATATAAGAAGTAAAAGTCCTGATATTATTGAGGTGCCATATAAACCACAATCACCACCAGAAATAATcgatttagaaaaaacaacaaatatagaacaaacgacatttttaaatgaaatgaaaaaagataaattggatattttaaaagaaGGTGGTTTAGAAGTAACACCAATACGAACGTTTATATCACCATTACAGATAAAAGATACACGACCATCTGTTATACAGCCAACTGGTGTTATACATGAAATGctaccaccaccgccgccgccaccacctCTACCACCATCCACATCATCGCTATTGCCGCAAGCTTTAAAtgttaatcaattaacaaataatcataataataatcataataataataataaaataaatccgcccagttataaaaaattaccatataTGAATGGTATTAGTACACCACCAAAGGTTatacaatcaaaatcaatttatacATATTCAGAAAATACAGTTTATGGTAATCcaaaagaatttaatttaacatcaattaatttatcaaaacataGTGAGCCACCGATGCCGCGACAATTTCCTTGTGATATTTTAGATTTAAGtgcaacaaattttaaaaaaccatcaatagaaataatgaaagttccgaatttaattaatcataatcacagttattatcaccatcatcatcaacaacaacaacatcaacatctaCATCATCCAcctcatcatcaacaacatcatcagaaacaaacttataataattcaacatataCTAAGCCACAGACATATAATCATTTACTTGATGGTAGACGGTTAGGttctaatgttgaaataacattagttaataataatagtaataataacagtagtagtagtggtagtaaaTCGAGTAATCAATCGAATAAATACAACAGTCTACCATCATTACCGACAAATCATAATCATTCAAATCGGTATCCACAAAAACGACCATCTAGTGAAGTTTACCCAAATCAAAAAATACCAAGATTAGAGGACTttaacaaactaaataaatcGAATCTTCTAACTGGATTACCACATTCAAGTAGAGAAATGAAATACAGTGATATACCACCacatctttataataatagtaataacagTACTAATAGTggtactagtagtagtagtagtagtagtttaAAACCAgattataattcattaatgaAAGTACCAttaccacaaccaccaccaccaccacatcCATCCGTACCATCTAcacataataatacaaaaccatCAATACCACcatatttatcacaattatatgATAGTAATAAAAGTTTACCATCACcttatttaccatttttagatccattttattatttatatccaCATAATACATTAAatacaacaccaccaccaattcttccatttccatcacaagaacaattaaaattttatagtgATTTAATGGCACGTAATTCACgtataaattttccattttcaataaatccaaatgatcatttgaataatttgaaaaaatcgtaa
- Protein Sequence
- MLFYILQDEVLAISEKVVLRVEDLITWITVDAEWTWGRLAKCEKDVKEAPDTDENKCTISTLSDSSLDFSDVEKERKALEHNAENEGPLVIILSYPRYCRYRAMMRRLEGVEDDYLKYKIVRALGGFTACTKNTRVLFCKDTFDYPELEGHELLCNHLAPKLKGRPRGKRKKRSVSPGSESNESESSVSNVVFPTISEKITIEGRNGLRCDTSLRRSTRAVENSESKEFLKELSMFMKKHYTPIGKIPSLGYKEIDLYSFYTKVQKLGGYDSVTANRLWKSIFDDMSGHQNSTSAATVIRRHYERFLLPYERHVKGEEHKPLPISERRRLKSKNGSSTSDAETSEGTSRSGNSTPVPQTPVTPVENKEFNIQVKTESKTSSLRSIRVKSERQKEKQIDKSNNSNNNGESNNCESIEIVKTENETSETDNIIKTENIVIKPDKDAEPLTSAIAPIVQKLPPEKSPSPVEGKENIPLIETGDIPNIRSKSPDIIEVPYKPQSPPEIIDLEKTTNIEQTTFLNEMKKDKLDILKEGGLEVTPIRTFISPLQIKDTRPSVIQPTGVIHEMLPPPPPPPPLPPSTSSLLPQALNVNQLTNNHNNNHNNNNKINPPSYKKLPYMNGISTPPKVIQSKSIYTYSENTVYGNPKEFNLTSINLSKHSEPPMPRQFPCDILDLSATNFKKPSIEIMKVPNLINHNHSYYHHHHQQQQHQHLHHPPHHQQHHQKQTYNNSTYTKPQTYNHLLDGRRLGSNVEITLVNNNSNNNSSSSGSKSSNQSNKYNSLPSLPTNHNHSNRYPQKRPSSEVYPNQKIPRLEDFNKLNKSNLLTGLPHSSREMKYSDIPPHLYNNSNNSTNSGTSSSSSSSLKPDYNSLMKVPLPQPPPPPHPSVPSTHNNTKPSIPPYLSQLYDSNKSLPSPYLPFLDPFYYLYPHNTLNTTPPPILPFPSQEQLKFYSDLMARNSRINFPFSINPNDHLNNLKKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -