Lpor026108.1
Basic Information
- Insect
- Lycophotia porphyrea
- Gene Symbol
- ZNF131
- Assembly
- GCA_950005105.1
- Location
- OX465412.1:4387892-4408704[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 2 1.7e+02 3.7 0.2 1 23 272 295 272 295 0.89 2 9 0.012 0.99 10.7 1.4 1 23 401 424 401 424 0.96 3 9 7.2e-05 0.006 17.7 3.2 2 23 429 450 428 450 0.97 4 9 0.093 7.7 7.9 1.5 2 23 458 478 458 478 0.97 5 9 2.3e-05 0.0019 19.2 1.3 1 21 484 504 484 509 0.94 6 9 0.001 0.085 14.1 0.3 1 23 517 540 517 540 0.94 7 9 0.0011 0.093 13.9 0.2 1 23 546 569 546 569 0.97 8 9 6.1e-06 0.00051 21.1 0.5 1 23 579 601 579 601 0.94 9 9 4.9e-05 0.0041 18.2 1.4 2 23 608 630 607 630 0.96
Sequence Information
- Coding Sequence
- ATGGAGCAGGATGTGGATACAGGATATAGAACCGTGTGCAGTGCATGTTTAAGTAGTGATCGCGATCTTTTCGGTTTGAATAATTCACCGCAAGTTTATCAAGTTTTTCGTTTGCTGATGTACGATTTCGCGGGCGACAGGTTCGGAGAGTCAATCCCGGAGATAGACCAGATGGTCTGCTGGGAGTGCCTGGCACTGATGAAGAggtttcataagtttaaatggCAGGTGCACAGTGCACAAGAGCATCTGAGGGTCCTGGCACTTAGCAGAACCCAGGAGGTGAGCATGGACCACACCTATATGTCACAATCCCTCTCCAGTCTAGAAACTGAGACCAAGGTGGAATATGACAAGATATACTTCGACTTCTCAGCGGCCCCTGAGGATCAGGGCTACATCATCAGCAATCACCCACAGAACGTGAAGAGTGAACACTATGATGTCGCTCAGGTGGTCCGGGATAGTAACATACTGGATATTGATGATCATCACATTGATAACCATATTTTGGAAGTGCCAGAAATAGTCCTGGAGAACCCAGTAACTGGAGTCATGTCTCATATAGTGGTTGGCACTGATGCTCTCGTGTCTTCTGAACCGATGACGAGTGTCCAGGGGAACATGCCGCATCTTACTATTGCGCCTCTAACAACATCCAAGATAGAGTCAGTTATCATGCGTCAATATACTCCGCCTAAAGAGGAAAAACCGGCAGCTAAGTTAGGTTATATAACGGAATACATGAGTGAAGCAGATATGTTGGCTTGCAGAGAGGAACTCAAACAGAAGGTGCAGTTCGCGAGCTCGGTGTACAAATGTGAGCTGTGTATCATTGGATTCTACACTCAACAACAGGTTGAAGACCATTTCGTATCTGCGCACAGAGCGaaaaccggccaagtagcTTGTAAAGTATGCTACATTTACATAGACGAGAGCAAACTGCAGAGCCACACAGACTCGCACTACCTGCGCTACAACTGCAAGCTGTGTGCGCACAGCGAGCTCAGCAACAAGCTGATACGGCAGCACGTGCACGCGCACATGAGCAGGGCCGCCAGCACCACGACCATCAAGTACGCCGACGTAAGGACCAGCAAGaacaaaaaaaagaaagacaaaGAGAAGGAAACACCCTCttctcctcccaaacctggcgATCTCCGCAAGCTGCTGGCCAAGACTTCCATAGAGGTGTACCAGTGCTTAGAGTGCGAGATGTTCTTCAAAAACTCCCGCGCTCGTAAGAATCATGTGGCTCGCTTCCACAGAGAGGGCTTGCAATGTGATCACTGCAAGAAGCGATTTGTGAACAGAACTACTTTGGCTACGCATCTCAAACTCCACGAAGGCCCCCTCCCCCGGGCAGAGTGCACGATTTGCCACAAGATGGTCCGGGTCATCCAGCTGAAGTACCACATACAAAGACACCAGAACAAGAGCCGCTACGAGTGCGAGGATTGCAACAAGACCTTCTCGCACCTCGCGACCTACCAGGCGCACCTCAAGTACTCGAGGGCGCATGCGTCCGAACAAGTGTTCAAATTCCCGTGTCCGATGTGCAATAAAGGGTACCCCACCAAGGAGGCGATGCAGGATCATTTCAACTACCAACATCTTGGCAAGACTGTGCACAAATGTCCTGTTTGTGAGAAGCCCATAGCTTCAAGAGCGAATGTCGACAAGCATATGATGCGAGTACATGGTCAGAAGAAAGAGAAACCCAGGAATCATGTTTGTCAAGAATGCGGAAAGGCTTTCActGACAAAAAAGCTCTAACCCAACACGAAGTCATCCACTCAGGCGAACGCCCCCTATCCTGCGACATCTGCCAGCAGACGTTCAAGCAAAAAGCGTCCTTATACACTCACAGGAAGAGAGTTCATAAGGTGTTCCCACAGAAGCGGCTCGTCGAGTATATGGACGATAACATGCAGCATTGTAAGGTCGAGAGGTTTATTGTCTGA
- Protein Sequence
- MEQDVDTGYRTVCSACLSSDRDLFGLNNSPQVYQVFRLLMYDFAGDRFGESIPEIDQMVCWECLALMKRFHKFKWQVHSAQEHLRVLALSRTQEVSMDHTYMSQSLSSLETETKVEYDKIYFDFSAAPEDQGYIISNHPQNVKSEHYDVAQVVRDSNILDIDDHHIDNHILEVPEIVLENPVTGVMSHIVVGTDALVSSEPMTSVQGNMPHLTIAPLTTSKIESVIMRQYTPPKEEKPAAKLGYITEYMSEADMLACREELKQKVQFASSVYKCELCIIGFYTQQQVEDHFVSAHRAKTGQVACKVCYIYIDESKLQSHTDSHYLRYNCKLCAHSELSNKLIRQHVHAHMSRAASTTTIKYADVRTSKNKKKKDKEKETPSSPPKPGDLRKLLAKTSIEVYQCLECEMFFKNSRARKNHVARFHREGLQCDHCKKRFVNRTTLATHLKLHEGPLPRAECTICHKMVRVIQLKYHIQRHQNKSRYECEDCNKTFSHLATYQAHLKYSRAHASEQVFKFPCPMCNKGYPTKEAMQDHFNYQHLGKTVHKCPVCEKPIASRANVDKHMMRVHGQKKEKPRNHVCQECGKAFTDKKALTQHEVIHSGERPLSCDICQQTFKQKASLYTHRKRVHKVFPQKRLVEYMDDNMQHCKVERFIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00039201;
- 90% Identity
- iTF_01062228;
- 80% Identity
- -