Basic Information

Insect: Lycophotia porphyrea
Gene Symbol: Sall1
Assembly: GCA_950005105.1
Location: OX465387.1:17929905-17937544[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.4 2.9e+02 3.0 0.3 2 23 6 27 5 27 0.95

2 14 0.11 9.4 7.6 1.3 1 23 1011 1034 1011 1034 0.92

3 14 5.7 4.8e+02 2.3 0.6 1 23 1113 1135 1113 1135 0.90

4 14 3.2e-05 0.0027 18.8 2.5 2 23 1138 1159 1137 1159 0.97

5 14 0.0002 0.016 16.3 3.5 1 23 1165 1187 1165 1187 0.99

6 14 0.0084 0.7 11.2 2.5 2 23 1194 1215 1193 1216 0.95

7 14 0.048 4 8.8 1.5 5 23 1229 1247 1228 1247 0.96

8 14 0.02 1.7 10.0 1.1 3 23 1254 1275 1253 1275 0.96

9 14 0.0017 0.14 13.4 0.5 2 23 1293 1313 1292 1313 0.98

10 14 0.00078 0.065 14.4 1.0 1 20 1319 1338 1319 1341 0.89

11 14 0.0013 0.11 13.7 0.2 1 23 1349 1371 1349 1371 0.98

12 14 0.0059 0.49 11.7 7.2 1 23 1377 1399 1377 1399 0.98

13 14 7.4e-06 0.00061 20.8 1.4 1 23 1405 1429 1405 1429 0.98

14 14 0.00048 0.04 15.1 4.1 1 23 1435 1457 1435 1458 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.4	2.9e+02	3.0	0.3	2	23	6	27	5	27	0.95
2	14	0.11	9.4	7.6	1.3	1	23	1011	1034	1011	1034	0.92
3	14	5.7	4.8e+02	2.3	0.6	1	23	1113	1135	1113	1135	0.90
4	14	3.2e-05	0.0027	18.8	2.5	2	23	1138	1159	1137	1159	0.97
5	14	0.0002	0.016	16.3	3.5	1	23	1165	1187	1165	1187	0.99
6	14	0.0084	0.7	11.2	2.5	2	23	1194	1215	1193	1216	0.95
7	14	0.048	4	8.8	1.5	5	23	1229	1247	1228	1247	0.96
8	14	0.02	1.7	10.0	1.1	3	23	1254	1275	1253	1275	0.96
9	14	0.0017	0.14	13.4	0.5	2	23	1293	1313	1292	1313	0.98
10	14	0.00078	0.065	14.4	1.0	1	20	1319	1338	1319	1341	0.89
11	14	0.0013	0.11	13.7	0.2	1	23	1349	1371	1349	1371	0.98
12	14	0.0059	0.49	11.7	7.2	1	23	1377	1399	1377	1399	0.98
13	14	7.4e-06	0.00061	20.8	1.4	1	23	1405	1429	1405	1429	0.98
14	14	0.00048	0.04	15.1	4.1	1	23	1435	1457	1435	1458	0.95

Sequence Information

Coding Sequence: ATGGACCAGCTCGTGCAGTGCCCTGTGTGCACGCTGTACCTGCACAATGGGATGTCTCTGGAGTCCCACTTGGACACCCATCCCAAAGACCAGGTTATAAAAGCTTTATGTAGTATAGCACACAAGGGCTCTAATTATGCCAGCAGGACTTCCACGCCGGCGCATTCTGAGCGCTCATACAGGAGCAGGTCTCGAACACCTGCCACGGATGATAGTGCCAAGTGGACTGGGTCACGTAGTACTGATCATGAGCGCTACTGGCGCAGAACTCCTAGTAGGGCCTCCAAATCTACACCAGTTTCAAATACATCTAGAAATGGTACACCCGATATTAGAATGCTTGATGTTAACTTTGAAAACCATGGATTGGCTGGTGGTGGTGCAGGACAGCATGTAAGCAATCCATTTCATATAAAAGCTGATAAAATTCAGCAGACCTTCCAGTGTCCTCCAGTCCCAGAGTTTGATGGACAGTTTGTTTACTACCCAGAGCAACAAGAGGACCGAGAGATCAAGTACTCCCGCAGTGCTGAGTATAATGCCTTGGACAATAGCAACAATATGTTCTCTTACAATGTGCCACCTATGGCAGGGCCAGGTATGAAATTGTTACCAGCAGCCCCTAGGAAACCGAATGACCTTGTTAAAATTCTACCAAAACCAAATAACATACTCCTTAAGACCAATATGGGCGGTGTGCAATACTTAGGTTCAGGGATGAAACCCATGCATGTTATGGTGCCATCAACACCTACATTCATGCAGAAGAATGTGCAGAACAACATGATCATGACTGGCAGTGTACCCAACCCACAAATGCACATTGATACCAAAACAACTTCACCTCCTCTAGCTAGCAACCAACTGAACCAAATGACTACTGGTGCATTCACTCCAGGAACAACTGTTGTTACCCAAAACTCTCAAATTATTTACAGAGAAATGGTGCACAATATAGATGGTAAGAACTTTATAACCACCATGCCCACAGTCCTTGGAGGTCATGACAATGTCACTAATTTAGCTCAGGCTAGCTCCATGTATCAAAATGTTATGGTTGTAGATCAGTTTGGCAATACTTCATGTATGTATACAACACCTCAACAAATGATCAATAAAGCATGCCCCACGTCTGTTTATAATGAGTCTGGGACTTCTGGGGTACCAAGTGCACTTGATAAATCTGTTCAAAGTATGACAGATCCGAAAACACTTATCATTGAGGTTGGTCCACTCGTAGCTCCTACACATGataatatttgtaaacaaaCTAGCCCCAGGATGTCACAGCCGGTTACCAGCACTGAAGTTGGCAACATTGACTCTCCGGTTGAGGCAGTGGACCCAAAATATGAAATGCCTGGTGGGACTAAAGGTTTAAAAATTCTGAGCAACATTAAGGTTGAGGTTCCCGTGCAACATAACAAGAACATGGTCAATACTGTCATGGATCTAACTGGGCCTAATGAGTCAGATTATCCTGTGGAACGAGTTGAGTCACCTGACAAGATTCTACCTGATCTAGAAGATAACAATCAACTGTCATCTGATGACACTCAGCCATCATCATGTCCATCCATGTCCAGTGGTGATAGCATAGTCTCTCATACATTTTCTGTGATAAAGAATGTTGGTAATCCAAGCAAAAGTTCTGACAGTAAGTTGGACACAGACTTTTCAGATAGCTGTCCTGTGCCAGATTTAATTTGTAATGAAAAGCCTTCCATATCACCTTGTAGCGAGTTGTCAGAAAATGGTGAAAATTCAACCGATCGTACCTCAATGTCCCCCAAACCTGAGTGTAATCAAGTTAGCCATAGTAACCTAGGACTTCCAGAAAAGAAAATTCAGCTTTCACAGAAGCCATACAGGCATAACACACTAAGACTGAACAATATTTTTGTGAAGAAGCACAAGAAAGTTTTGCAGATTAAGAATGTCAAGGCCTTTCCTGTGAGCACAGCAAAGAAATCTGAACAAAGAGACACCATTCCGACGTCGTCTACCTGCAAATCGCCAGAAAATTTTAGCATGAATAAATTGCACCAAACAGATAAGACAGATAGTAAGGAGAAGACTAATCTCTTGCAAACCATATCTGTTGAGGAGATCAAGGAGAATGATGAGAACTTTGATGCTGACACATCAGAACAATCCATGGACATAGAAGCACTAACAGCAAATGATTTGGATCAGCCGGAGTTTGCTGCGAATCTTGACATGATTCAGGTGAAAGAGGAAATAAACTCGAGCAATGAAGGAGCATTCAGTAACGAGCCAGTGACGACGGACCGCATGCTGACTCCACTAGAAACATTGCGACCTATTAATGTTATTAACTATAGTAATCTGTCCAATGAGGATTTTAATGAGGAGTCCACCGACAGGGAGTTACTGGACCTTGAAGCGGCGTCTAAAAACAAACAGTTTGTTAGCATGATGAACGAAAATTATTTCGGCGACAATATTTACGCAGATTACTTTACTGCCGACCGCGTGGAGGCGTTCGACGCCGAGCGCGAAGCGGCGGGATTCAAGGAGGGCGCTAAGGACGGTATGTACCTCTGGGGCGAGCCTTCGCAAAAGGACAACGACTTTGTGCTACCTAACTTTATACACGAGAGTTACAAAATAGCTGAGAGTACTGGGATTGATTATTCTGAGCTAGGTGCTAGAGCAGGACAGGTGGACGTGGAGGTGGACGGGTGCGAGCCGGACTGCAAGGCGGACGTGCTGAGCGAGGGCCGCAGCGAGAGCGACGCGCCCATCAACATCTGTGCCGACGAGCGCATGCCGCCGCGCGGCGAGCTCAGCGGACAGGAGAGCAACGGAGACATGGAGTCGCCCTGGAGCGGGATGTATACAGATGTGACCCCCGCGGAGCCCTACGATCTAATCGCCCGCGAGAGCTGGGTGTCGGACGGATCAGAGGTTGATGCGAACGAGAAGCGGGAGCCCATCGAAGAAGAGCTACAGCTCCCGCTCGCCCCGGTGCTGCCGCTGCCGCCGGTGTTCGCGCGCGCGCGCGTGCACACGTGCGCGGCGTGCGGCGCCACGTGCACGTCGCTGAAGGAGCTGCGCGCGCACAAGTCGCTGGTGCACGCGCTGCCCACGTGCTCGGCCAGCAAGACGTCCTACAGCCGCCTTGTCACGCAGCGCGCTATCAAGAAGGAGGAGAAACCTGATACAAACAACTTACTACCACCAATAGACTCTAAAGACTCGATATCGTCGACGATCCTCGAAGTTTACGAGAGTATACAAGTCGAGGAGGCCAAGCCCAAGATCGAGGTAGACCGGCTGATCAAGCAGGAGGTGAAGCGCCGACGGAAGGACTACGTGTGCCCGACGTGCAAGGTGGACCAGGGCACCGACGCGCAGTTCCACGCGCATCTCAAGACTCACCCGCTGGAGTGCCTGACGTGTGGGAAGTGCTTCTTCAGAAGAGCCAACCTGTCTCTGCATATAAAGACACATTTAGGAATTAAGAATTATAAGTGCGAGGTGTGCGAGAAGCGCTTCGTGACGCGGCAGAAGCTGTCGGAGCATCACAACACGCACACCGGCCGCGCGCCCGTCAAGTGCACCGTCTGCGACGACACCTTCCGTCGGTACTCCAACATGGTGCAGCACAGGGACCGCCACCACCTGGCCAAGCGCGCCAAGGTGCGCGACTTCGTGTGCCAGTGCGGCCTGGTGTTCCACTCGCGCGCCAAGCTGCGCTGGCACCAGGAGACGCACGCCGACCGGCCGCGCGCCTGCCTGTACTGCAGCGACAAGTTCGTGCACGCGGCGTCGCTCACGCGCCACGTGCGGCGCTCGCACAACGAGTACTTCCTCGCCGAGCGACACAAGGGCAACAAGCAGGAGAACGTGCAGTGTCCCGTCTGCAAACAGGTGTACCTCCGCTCGAACCTGCGCACGCACCTGCAGACGCACAGCGGACAGCGGCCCTACATGTGCATCATCTGCAACAAGTCGTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACGCGTCGCGCTCGGCGAAGCCCTACAAGTGCGCGCTGTGCAAGGGCGCCTTCATCCGCCAGTCCGAGTACGTGTCGCACATGAACGCGCACAAGTCCGTGCGGCCCTACACCTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGCGCCACGTGCGCGAGCACGAGATGGCCAAGAAGTACGTGTGCAAGGTGGCCGAGTGCGGCAAGTCCTTCCACCGCAGCTACTACCTGTCCGAGCACATGAAGGTGCACTCGGGCGCGCGGCCCTTCGCCTGCAACATCTGCGGCAAGACGTCCAGCAACAAGTCCAACCACAACAAGCACGTGCGCATACACCACGCGCGCGAGCCGGTCGCCACCGAGGCGTAA
Protein Sequence: MDQLVQCPVCTLYLHNGMSLESHLDTHPKDQVIKALCSIAHKGSNYASRTSTPAHSERSYRSRSRTPATDDSAKWTGSRSTDHERYWRRTPSRASKSTPVSNTSRNGTPDIRMLDVNFENHGLAGGGAGQHVSNPFHIKADKIQQTFQCPPVPEFDGQFVYYPEQQEDREIKYSRSAEYNALDNSNNMFSYNVPPMAGPGMKLLPAAPRKPNDLVKILPKPNNILLKTNMGGVQYLGSGMKPMHVMVPSTPTFMQKNVQNNMIMTGSVPNPQMHIDTKTTSPPLASNQLNQMTTGAFTPGTTVVTQNSQIIYREMVHNIDGKNFITTMPTVLGGHDNVTNLAQASSMYQNVMVVDQFGNTSCMYTTPQQMINKACPTSVYNESGTSGVPSALDKSVQSMTDPKTLIIEVGPLVAPTHDNICKQTSPRMSQPVTSTEVGNIDSPVEAVDPKYEMPGGTKGLKILSNIKVEVPVQHNKNMVNTVMDLTGPNESDYPVERVESPDKILPDLEDNNQLSSDDTQPSSCPSMSSGDSIVSHTFSVIKNVGNPSKSSDSKLDTDFSDSCPVPDLICNEKPSISPCSELSENGENSTDRTSMSPKPECNQVSHSNLGLPEKKIQLSQKPYRHNTLRLNNIFVKKHKKVLQIKNVKAFPVSTAKKSEQRDTIPTSSTCKSPENFSMNKLHQTDKTDSKEKTNLLQTISVEEIKENDENFDADTSEQSMDIEALTANDLDQPEFAANLDMIQVKEEINSSNEGAFSNEPVTTDRMLTPLETLRPINVINYSNLSNEDFNEESTDRELLDLEAASKNKQFVSMMNENYFGDNIYADYFTADRVEAFDAEREAAGFKEGAKDGMYLWGEPSQKDNDFVLPNFIHESYKIAESTGIDYSELGARAGQVDVEVDGCEPDCKADVLSEGRSESDAPINICADERMPPRGELSGQESNGDMESPWSGMYTDVTPAEPYDLIARESWVSDGSEVDANEKREPIEEELQLPLAPVLPLPPVFARARVHTCAACGATCTSLKELRAHKSLVHALPTCSASKTSYSRLVTQRAIKKEEKPDTNNLLPPIDSKDSISSTILEVYESIQVEEAKPKIEVDRLIKQEVKRRRKDYVCPTCKVDQGTDAQFHAHLKTHPLECLTCGKCFFRRANLSLHIKTHLGIKNYKCEVCEKRFVTRQKLSEHHNTHTGRAPVKCTVCDDTFRRYSNMVQHRDRHHLAKRAKVRDFVCQCGLVFHSRAKLRWHQETHADRPRACLYCSDKFVHAASLTRHVRRSHNEYFLAERHKGNKQENVQCPVCKQVYLRSNLRTHLQTHSGQRPYMCIICNKSFTTKWNLKLHRWTHASRSAKPYKCALCKGAFIRQSEYVSHMNAHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVAECGKSFHRSYYLSEHMKVHSGARPFACNICGKTSSNKSNHNKHVRIHHAREPVATEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00908225;
90% Identity: iTF_01534216; iTF_01062158; iTF_00712254; iTF_00685762; iTF_01084555; iTF_01063119; iTF_01064954; iTF_01085711; iTF_00041173; iTF_00925146; iTF_00043868; iTF_00042943; iTF_00301501; iTF_00302449; iTF_01533343; iTF_01535211; iTF_01532414;
80% Identity: -