Lpor020954.1
Basic Information
- Insect
- Lycophotia porphyrea
- Gene Symbol
- Mblk-1
- Assembly
- GCA_950005105.1
- Location
- OX465404.1:3603870-3653978[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-13 6.4e-11 42.5 0.0 1 36 264 300 264 304 0.92 2 2 3.1e-18 1.5e-15 57.3 0.0 1 43 476 519 476 521 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGAAGAAAATGGAAACTATATCAGGACGCATTAATTCCAAAACGGGGGGAGGCAGAATTATCGAGCGACGAGGAATCGGTACAAACCGACCCTCCACCGGCGTTGAAGATCAAGACTATAGAACAGATCAACGAGGACGAAGCAAAGGAAGAAAGGGTGGAGGAGAAGGTGGCTCGAAGGCCGGAGACGATTCTAGAGTCGTTGATCAAGAGGCCTGCTACTCAGCCCAAGCTGGAGGTCGCCGAGGAACCAGCAGATTGGAAGCCGCAGGACAAATGTTACTTCTGTACGGATGGTGAACCTGGCGGGGGCGAGAACAGGCCGGGCGGTGCTATGAGTCCCGCGTCGGAGTCGGACAGCAGTTCGGTGTCGGGGGCGAAGAGCCCGGCGTCGGCGCCGCCGCTGCTGCAGCATCTGCTCCAATTGCAGGCGCAGAACCCACAGACTATTGCACAGGGGTACACAGACATGTGTCTGCAGTTTCAGCAGATGCTGACGGCTCTGGCTGCGCTCGGCAGCGGGCTGGTGCCGCCACCGCCGATGTCGCAGCCCTGGATGATGCAGCGGATGGTGCATAGGCAGAACGAGAGGCTACCCCAGGAAGTGTGCGAGAAGGCGCCGGCGTCTTCATCCCCCAACCTGGCGGAACAGCCCCTGGACCTCAGCGCCAAGTCTACCTCCAGCACCAGTGGCACACCACCTCCTGACTCCAAATATTTGGATAACAGaTTAAAGCGAGCAGTTCTCGAGAGTGCCAGCAACAGCTctggtcgccgtgcgtacagTGAAGAGGAGCTCCAGGCAGCCGTGCGGGAAATCCAGTCTGGCCGGCTGGGCACCCGCCGCGCTGCCCTCATCTACGGCATCCCGCGCTCCACGCTGCGCAACAAACTCAACAAGTTCGGCTCCGTCGTTGACCACGCTGACTCCGACAACGACAGCGATGCTGACCGCGCCGACTCGCCTCCCTCCGTTATCCTCAAAATACCCACATTCCCCCCACCCGACGACAAGAGCCCATCCCCAGCTGGACAACACCAAGGCCCCATAGCGCCAATAACACCGATGCTCCCCACGGGTCAAGCCTCACTTAAGCCACCCTCACAGCTGCTGCTCCCGCCCTCGGTGTTCGCCGACCCTCCCTCCACACAACACCTCTTCACGTCCCTCAGTGACGTCATCGCTAAAAGCATCAGCCAAAAGTTCCAGCAACCCCTAGATAGGCCGCACCACCAGCACCAGCCTAATGAGCTGATGTATGCGCGAGGTCCTGACCGACACGTGTCTGTCATCAAGACTCCGCCGGACAACCAGCGCTACCCCGCGCCCGGCAACTCCAAGCAGATGCCGAACAACAACGGGCAGCCGGCCGCCGGCGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGGAACTACGACCGCGACAGTCTGGTGGAGGCGGTCAAGGCGGTGCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACGCTCGAGTACAAGGTGAAGGAGCGCCACCTCATGCGACCGCGCAAGCGCGAGCCCAAGCCGCCCCAGGACGCCGGCAAGCCGCAGCCGCCGAAGCCGCCGCCGCCCAAACCGCCGACGAAACCGTTCTCCAACGGACTCAACGGACCGGAAGCCCCGGGCTACCCTCCCGGCTACCCGTTCTGGCCGGGCAGCGGGTTCCCCCCGCCGCCCGCACCGGACCTGTACGCCTCGCACATGATGCGACGGCTGCGCGAGGAGGCGCCGCCGCCCGCCAACGGCTCGTTCCTGGAGGGCATCATCCGCTCGTCGCTGGAGCGGCCGGCGCTGCTGCAGCGCCTGGCGGCCCCGCCGGCCGGCGAGCGCCGCGTGGCGCCGGACGAGGAGCCCCCGGTGCGGCGCGCGCGGCTGGACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGCCTGCGCGCCGACAAGCTGCGGCCGCGCAACGGTACGCCCActccgccgcccgcgccgccgccggccGCGCCGCCCGACCGCGCCTAG
- Protein Sequence
- MGRRKWKLYQDALIPKRGEAELSSDEESVQTDPPPALKIKTIEQINEDEAKEERVEEKVARRPETILESLIKRPATQPKLEVAEEPADWKPQDKCYFCTDGEPGGGENRPGGAMSPASESDSSSVSGAKSPASAPPLLQHLLQLQAQNPQTIAQGYTDMCLQFQQMLTALAALGSGLVPPPPMSQPWMMQRMVHRQNERLPQEVCEKAPASSSPNLAEQPLDLSAKSTSSTSGTPPPDSKYLDNRLKRAVLESASNSSGRRAYSEEELQAAVREIQSGRLGTRRAALIYGIPRSTLRNKLNKFGSVVDHADSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQHQGPIAPITPMLPTGQASLKPPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQHQPNELMYARGPDRHVSVIKTPPDNQRYPAPGNSKQMPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDAGKPQPPKPPPPKPPTKPFSNGLNGPEAPGYPPGYPFWPGSGFPPPPAPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLAAPPAGERRVAPDEEPPVRRARLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_01084170;
- 80% Identity
- -