Lyun034008.1
Basic Information
- Insect
- Lycocerus yunnanus
- Gene Symbol
- pnr
- Assembly
- GCA_036346125.1
- Location
- JARFIX010000200.1:305227-309317[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3 1.2e+04 -2.8 0.2 4 9 37 42 35 43 0.79 2 2 6.1e-13 3.3e-09 37.4 3.6 3 35 263 294 262 295 0.95
Sequence Information
- Coding Sequence
- ATGTTGGAGTACCTGGAAGACCACATTTTGTCGTCAGATGAAAGAATGAATTTGGGATCCCACGAAGCAATCTCACGAAGTTGCGATATTGAGTCACAGCAATCACTTTGTGGCACGAATCGTACAAAATACCAGGACTTGAAAACTGGTTATTATCACGTTTACATATCATCAGATAAGAACAAATCTGTTTCTTATCATGAAATTTTGCCTTCTCAATTAAGAGAATTTTTTGCTCCTCGTAAGCCTAGACGGAGAGAATTGAGAAAAGCATACAAGAAATGCAAATCAACCAAACAAAAACCTGATATGAAAAATCTCGCCGAGCAGAACGGCCTTGAAGAATATCAGTCCCCAGGAGCCATCTCCGGTAGCAGCTCgaaaaattcaacaaatcaaGAATATTCGCAAGAGAAACCTGTGGAATACACGACGACAATCGAAACAGCAAATATACAGGGTTCAGATCCTCACATTCAAATTGAAGGTTTCAATTTAGTGAATCGCACGACGATGTTCAATTATGAGGTGCAAAACTCTCAATCGTCGAACAACCACGTAACCCTTATTGGTCATGGTGAAAATAGTCATCAGTATTCTGTTTCTGTAACGAGGACACCCACCACTGCTAACTCTTCGGAGTATACCACATATTCTGGTTTGCAAGCAGGATCCGAGAGCATTGCATACCAAAATTTTCCTGGAAACTGTACTACGTGGACGCAAATTGAAGATGGATATGAAGCTGGCACACCAATACAGGATGTGGACATTAAGGAGTATGTTAATTGCGGAGCAAGCATAACGCCTCTTTGTCGACGAGATGGTACTGGACATTGTTTGTGCAATGCCTGTGGACTATACAATAGGATTAATGGTGTTAATCAACCTCTTGTAGTACGTACAACCAAAAAACCACCAACGatATCCCAAGAACAATTCTTATGTGATTGCAAATACACGGATGAGTAA
- Protein Sequence
- MLEYLEDHILSSDERMNLGSHEAISRSCDIESQQSLCGTNRTKYQDLKTGYYHVYISSDKNKSVSYHEILPSQLREFFAPRKPRRRELRKAYKKCKSTKQKPDMKNLAEQNGLEEYQSPGAISGSSSKNSTNQEYSQEKPVEYTTTIETANIQGSDPHIQIEGFNLVNRTTMFNYEVQNSQSSNNHVTLIGHGENSHQYSVSVTRTPTTANSSEYTTYSGLQAGSESIAYQNFPGNCTTWTQIEDGYEAGTPIQDVDIKEYVNCGASITPLCRRDGTGHCLCNACGLYNRINGVNQPLVVRTTKKPPTISQEQFLCDCKYTDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -