Lyun011750.1
Basic Information
- Insect
- Lycocerus yunnanus
- Gene Symbol
- retn
- Assembly
- GCA_036346125.1
- Location
- JARFIX010000020.1:580859-631937[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-25 8.6e-22 78.6 0.0 2 89 165 250 164 250 0.96
Sequence Information
- Coding Sequence
- ATGCCCATGGAGTTGGACGTTTTAGAAGAGGACGATTTGTATGGTGTTGGTGAATGCAATAACGTAGAAATGCAATCGAACGAAGTTGATAATATTTCGAATAACGGAGACGATATTAGCGATGGCGAAGGAGAAGACAGTAGCGAGGAGATGCAAATGCCATCGGTTATAGATAATCACAACgacgtaattaataaattaaagatgcAGGTGCGGGACATAAAGGACCAATTTGACGAAAGACAATTGCATTTTCCCTTATCGAATCGACTGCAACCGGGCATCAGAGACGACGTTCTTCCATTAGCTTTAACTGGATTTCCATTTCAACATCCAGGTTCGTTCATGCCTCCGCTTCCGCAACAACATGCAGCTCCTTCGTCGGGAAGTTCACATTCTTCGGAAGGAAGTGCACCTTCGCCACAAACTTGGTCGTTCGAAGAACAGTTCAAACAGGTGCGTCAGTTATACGAAATCAATGACGATCCAAAGCGAAAAGAATTTCTGGACGACCTCTTCTCGTTCATGCAAAAGAAagGTGCACCCATCAATCGGTTACCAATAATGGCCAAGTCGGTCTTAGATTTATACGAATTGTATAATTTAGTGATAGCAAGAGGTGGTTTGGTGGACGTAATAAACAAGAAATTGTGGCAAGAAATCATCAAAGGTTTGCATCTTCCTTCGTCCATCACATCGGCAGCATTTACATTAAGAACGcaATACATGAAATACCTTTACCCCTACGAGTGCGAGAAAAAGCGTTTGTCGACGCCCAACGAACTACAGGCGGCCATCGACGGCAATCGGCGAGAAGGACGTCGCAGCAGTTACGGACAATACGACAATATGACGCGATCGCCGGGAATGCATCCGACCCCGGCAATATCTCCAATTCAATTAGTTAATCAGCATCAGTTAGCGGCACGAATGAATTCCGTGATGGCAGGCGGATTGGGATTGCAAAACGGAGCTCTCCATCCAAGCCATCCTCAACCAATGAATCAGCAAATGAACGGATGTCCAGCTAACCTGGCACCGCACGAGTACGAGGCTCGCATTATGGAGTACATGAAATTACTCAACAAAGAAGTTCGCAACACTTACGGTCCACAAGCTTTATCGAATCACACCCTCGATTCGGTGTCGGATGTTCCGAGCATAACCCCGATGGACGTAACTCGATTACAATTATTTAGTTCCTTATATAGTAGTAATAATAATGCGTTACCCAATGCGTTGCAACACGAACCGCAGAAAGAAGCTTTAAATCTTTCGGACACAAATATTCCTTCCTCGGTGTCGATTAAGCGGGAAGCCGATACCGATATATCAAATTTACCTAAAAAAACCAGCAGAGAGGAGGAAAATCGTAAAAGTACAATACCCAGTGcccattttaaaatagaaagtaGAGgGAACTCAAAGGATGGAGAAAATTCAGTAGTAGTAAGTATGGAATTGAATGGAGTCATGTACCAAGGTGTGCTGTTTGCACAAACAACAAACGGAAGAACCGTTTAG
- Protein Sequence
- MPMELDVLEEDDLYGVGECNNVEMQSNEVDNISNNGDDISDGEGEDSSEEMQMPSVIDNHNDVINKLKMQVRDIKDQFDERQLHFPLSNRLQPGIRDDVLPLALTGFPFQHPGSFMPPLPQQHAAPSSGSSHSSEGSAPSPQTWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKKGAPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKRLSTPNELQAAIDGNRREGRRSSYGQYDNMTRSPGMHPTPAISPIQLVNQHQLAARMNSVMAGGLGLQNGALHPSHPQPMNQQMNGCPANLAPHEYEARIMEYMKLLNKEVRNTYGPQALSNHTLDSVSDVPSITPMDVTRLQLFSSLYSSNNNALPNALQHEPQKEALNLSDTNIPSSVSIKREADTDISNLPKKTSREEENRKSTIPSAHFKIESRGNSKDGENSVVVSMELNGVMYQGVLFAQTTNGRTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00272240;
- 90% Identity
- iTF_01293355; iTF_00270829; iTF_01293354; iTF_01293353; iTF_01293356; iTF_00272240; iTF_01291252; iTF_00269532;
- 80% Identity
- -