Lhir007080.1
Basic Information
- Insect
- Lycia hirtaria
- Gene Symbol
- gatad1
- Assembly
- GCA_947563715.1
- Location
- OX387377.1:29785876-29789456[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-08 9.5e-05 22.6 2.1 1 30 6 33 6 38 0.93
Sequence Information
- Coding Sequence
- ATGCCTAAACCGATTTGCATCCAGTGCAGCACCAACGACTCCCTCCTCTGGCGCAACCAGGAAAGTGGACAAATATGCAACGAATGCTACCTCGCCAACACTGTCAGCAAGGAGGCGAAAGCAGACGTTAAAACAGAAAGTGAGGTGAAAGAAGACGAAGACTGCAGAAACGGGGAAGCGACACCAGCGAAGGCAACAGGAAAAGGGACAAGAAAGAGTACACGAGCAACTCGCTACAAACCGAAGACACCAGCCGTGGTGGTCCCTCCGCGGCCGCCCGCGCCTCGCGGTCGTGGCAGACGTTCCATCTTCAAGCGGCCTCCACTGAAAGCCCCGACAGCCACAGCGACAGTTGTCTCGAGTGATTCTATATTTTATAAGGGCACATACATGCAAGTGGGCGACATAGTCTCTCTGCTGGACATAGACGGAGGCACGTACTATGCACAGATCAGGGGTTTCCTCACAGACCAGTACTGCGAGAAGAGTGCCGTGATCACATGGTTACTGCCAACTAAAGCCAGCCCTCCACCAGAGAAGTGCTTCGACCCAGCCACTTATATTATTGGTCCAGAAGAGAGTCTTCCGCGCAAGCTAGACTATATGGAATTCGTGATGCACGCTCCCTCCGACTATTACAAGTCGAGTAGTACTCCTTTCCCCCCCACTGAACCCGCGTTGCGTGACTACAGCGGGTTTATATGGACCAGCATGGATGCTAAAGAACGGACATAG
- Protein Sequence
- MPKPICIQCSTNDSLLWRNQESGQICNECYLANTVSKEAKADVKTESEVKEDEDCRNGEATPAKATGKGTRKSTRATRYKPKTPAVVVPPRPPAPRGRGRRSIFKRPPLKAPTATATVVSSDSIFYKGTYMQVGDIVSLLDIDGGTYYAQIRGFLTDQYCEKSAVITWLLPTKASPPPEKCFDPATYIIGPEESLPRKLDYMEFVMHAPSDYYKSSSTPFPPTEPALRDYSGFIWTSMDAKERT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00056207;
- 90% Identity
- -
- 80% Identity
- -