Lhir013749.1
Basic Information
- Insect
- Lycia hirtaria
- Gene Symbol
- SNAPC4
- Assembly
- GCA_947563715.1
- Location
- OX387384.1:13265545-13267857[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 4.4 5.6e+03 -1.8 0.0 2 12 36 46 35 49 0.83 2 6 2.4 3e+03 -0.9 0.0 22 33 212 223 209 228 0.77 3 6 1.3e-07 0.00017 22.3 0.1 1 45 243 289 243 290 0.93 4 6 3.5e-08 4.5e-05 24.1 0.1 3 44 298 343 296 345 0.91 5 6 6e-12 7.8e-09 36.2 0.0 1 43 349 391 349 393 0.98 6 6 1.5e-07 0.0002 22.0 0.0 3 45 401 445 399 446 0.92
Sequence Information
- Coding Sequence
- ATGGAACTCAAGAGTGATAGTGAAGATTCAGACGATGAGCTAGTACAGAGTTATCTCAAAGATAATCGGGTGGAAACAATTCTAGCGAAAAGAAAAACCCCCAAAGTAGTATACACACCTGAAGAACTTGAAAAGATCTCTGTTTATAAGAATGCTTTGGCCATCAATAGAGAAAGGTACGCCTATTACAAACAACTTGAAGATACTCTTACTAAGATGTTTGAAAATATCAAGAGAAAACTTAAACAAAATGAAGCGTCTCTATTGAAACAATCTAATATTGTCAATAAAGGTTCGTTCAACTACTTACGGTGCGGCAAACCCTATTTTAAAGATGAACTCAACTGCTCCGCCCCTGACAATGATGACACCATCATGATGAAGCAAGCGCAAATGTGTGATTTTTCACAAGTTAACATTATAACCGGTTGGACAATTAAAGATAAAACTGAGCTAGCTGGTGCCCTTCTGGAAGCATCTAGAGAAATTAGAAAAGAAGAGTTGAGGTTACAAATATCAAATCTTAGTAAAGACAAAAAAAATGTATTGAAAATAGCTAAATTAGAAAGAGAAATCACTCAACTTAGTAAAAAAACTCTAGCTGAAATAGCTTTGCCCCTGGATCAGGAATATGATTGGGATGATATTGCTAATACTTTGAATCATAGACATACTGCACAAGAATATCAAGCGCTATGGAAGTTGTTCTTCCATCCATCAATTAATAAAGATAGCTGGACTAAACCTCAGCAACAAGAGTTACATAGGATAGCAATGGCTCATAATTTTCAAGATTGGGATGCAATTGCTAAAGAATTGAAAATGGGGCGAACTGGTTATCAATGTTTTGTTTATTATCGTACAAACATGGTTGTTACATATACAAATCGTAAATGGACAAATGAAGAAAAGGAATGCTTACAACAGGCAGTTGAATTCTTTAGAGAAGGTACATACATACCCTGGAGTAAAGTAGCATCTGCTATGGAAGGACGTACAAAGATGCAAGCTTATAACAAATATCTAAGAATGATGGAGGGTCGTAAAGGGAGGTTCTTAGAGGAAGAAGATGTTGTTCTACTGAATTGTTACAATAAATATGGAGATGACTTTAGAAAGATATCAAAATTTCTACCTGGCAGGTCAAATGTGCAGCTCAGAACTCGCTACAATATATTGACTAAGACAAGAAGGTCTACAACATGGTCAGTTGAAGAAGACCGGAAGCTTATACAGCTAATGGCTAATATGGACCGTAAAACCAGTTTCTCAACTGCAACCAAGCATTTTCCAGGCAAAGACCGGTCAAACATACGATCTCGGTATGTTACTTTGATGAAATGGATGAAGGACCATCCTGCTTCTGATATCTCTATGGCTCCACGTCGTGGTGCACGTAGGCTCTTACATGGCCATGCTACAGTTGGCTTAAAAGAAGCTATCACCAATCTAAACAAAAGACTTGAGTCCGAAGTAAATATAAAAAAGAATAGTAAAATAACTTTACAGTCAAGTGAAAAGGATATTGAGGATGGCATTATGGCATTACTCGTAAATGAGATCATTAAAGAAGAATCTGGTAAAAGGCCTGACCAGTCCGAGCTAGGAGACGATGAAAACTCTTCTGTACATCAAGAGGCATCAGCAGAAAATACAAATAATCTACATAATTTGCTTGTATTCTTGAGTGCTTCTCTGAAAAAAAATGAATTTAATGAGAGTAAATATGCTTCAAAATATCCGAAGTTAAATGAAGCATTTCATGCCAACTCCCATCTTACAGTAAAATCATACTCGAAACTGAAAACTGTAGAGACCTTAGAAGTCGATGATTCCCCAGACATATGGGACCAAAAGCCTAGATTGAAACGTTCATACTATGTATTACCACCTAATTATGCCACTATAACTGGCTGCCGAGTGCTTATGAAGAGATATGGTACAAAACCTGAAACACAATCGGGAGAAGATCTTAATCTAAGTCTGATGGCACGTAGAAACTTATTCCTAAAACAAGCAATAGAAACATTGAAGGAACGATTTACAACACTATTCATGTGGCCAATAATGCTTTCTAATGAAATGCCAAAACTTGCTAATAAACCATATGAACCAGAAGTCAACTCTAAATTGCATCTTTCAAAGAAGAATTTGAAATTTGATGCAGATCAAGGTGAAAAGGATGACAGTGAAGATGAAATAGATGACTCAATGCAATATAATAATGACTTGGACGAAGTGCAATTTTCATTAGGAATGCCGATTCCAGGTTCTAGCATTCAGGTTGCTGAAGAAGTCATAATTCCTGACTAA
- Protein Sequence
- MELKSDSEDSDDELVQSYLKDNRVETILAKRKTPKVVYTPEELEKISVYKNALAINRERYAYYKQLEDTLTKMFENIKRKLKQNEASLLKQSNIVNKGSFNYLRCGKPYFKDELNCSAPDNDDTIMMKQAQMCDFSQVNIITGWTIKDKTELAGALLEASREIRKEELRLQISNLSKDKKNVLKIAKLEREITQLSKKTLAEIALPLDQEYDWDDIANTLNHRHTAQEYQALWKLFFHPSINKDSWTKPQQQELHRIAMAHNFQDWDAIAKELKMGRTGYQCFVYYRTNMVVTYTNRKWTNEEKECLQQAVEFFREGTYIPWSKVASAMEGRTKMQAYNKYLRMMEGRKGRFLEEEDVVLLNCYNKYGDDFRKISKFLPGRSNVQLRTRYNILTKTRRSTTWSVEEDRKLIQLMANMDRKTSFSTATKHFPGKDRSNIRSRYVTLMKWMKDHPASDISMAPRRGARRLLHGHATVGLKEAITNLNKRLESEVNIKKNSKITLQSSEKDIEDGIMALLVNEIIKEESGKRPDQSELGDDENSSVHQEASAENTNNLHNLLVFLSASLKKNEFNESKYASKYPKLNEAFHANSHLTVKSYSKLKTVETLEVDDSPDIWDQKPRLKRSYYVLPPNYATITGCRVLMKRYGTKPETQSGEDLNLSLMARRNLFLKQAIETLKERFTTLFMWPIMLSNEMPKLANKPYEPEVNSKLHLSKKNLKFDADQGEKDDSEDEIDDSMQYNNDLDEVQFSLGMPIPGSSIQVAEEVIIPD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -