Lhir006631.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lycia hirtaria
Gene Symbol
SPE
Assembly
GCA_947563715.1
Location
OX387377.1:20282721-20327118[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-09 1.9e-06 28.1 0.0 3 37 76 110 74 116 0.94

Sequence Information

Coding Sequence
ATGGTAACCCGCTGTTTCTGTCTAACTCGTAACTTCGACGCCCTGACTGAGGTCCACAAGGATGACATCAAGATGGTTACAGGCATGAGGGCATTGACATGCGGCATGCTGATCGTTGGACATCTGCTCTTCTTGTCCCAAACGACATTCGTCAATCAAATGGATGCTGAAAATACAATGTCTCGAAGATATGAACGAAAGACTCTCCTAGCTTCTTGGAGTGCAGAAGATCTGGAAAAAGCAATGCAATGTGTTCGCAGCAAAGAAATGGGAGTAAATGAGGCTTCAAGAAACTTCAACATTCCGTCTCGAACTCTAAGAAGGCACCTTATAACGGGTAGATCAAAAGTTCCTTTAGGGCGCAACCCAGTATTTTCTAACAAATGCGAGAAAAAGTTAGTTGCTCATATAAAAAAACTAGAAAGTGTCGGCTTTGCCCCAAAAAGAAAAGATGTCAAAGAAATGGCTTTTCAATTGGCTGAGAAACTAAATATAAAAAATCCATTTTCAAAAACGAATGAGGTTGCTGGCAATGTTTGGTTTACTGGGTTTATGGCTCGCAATCCAGAATTAAGTCAAAGAAAATCCGAAGGATTATCTCTTTCTAGGGCGTATGGCGTCAATCGAGAAGATGTCAAAGAGTTTTTTGATTTGTTAACCAAAATATATGAAGAACACGATTTTACAAACCACCCTGAAGATATTTTTAACATGGATGAGTCCGGAATTCAAATAAACAATAAACCTGGCAAAGTAATTGCGACAAAGGGAGATCGTGATGTTTATACACTTACTAGCTGCGAAAAGGGTGAAAATGTCACTGTTATCGCCTGCTGCAATGCTGTAGGCAACTTCCTTCCTCCTACTTTAATATACAAGGGAGTCTACAACAAACCACAATTTTCCGAAGGTCTTCCGCCAGGTTCACAAGTTTTTATGAACAAAAAATCTTCATATATCAATGCAGATTTGTTCATGAAATGGTTCGAGGATGTATTCTTACGCCACAAGAGCTCAAGAAAAACACTGTTAATATTAGATGGTCACAGCTCGCACAGTAACAATATTCGTCTGCTTGAAGTTGCAAAAGAAAATGACGTCATACTTTTGTGTCTTCCAAGCCATACGACCCATGCCCTGCAACCGCTAGATAGAGCCTTTTTTAGGCCTTTGAAGGTGTATTTTACACAAGAAGCTAAATCATGGATGGTCAGATGTAAAGACAAGAAGTTGACTCGCTATGATGTGGCTCAATTGATCGGAAGAGCTTGGGGTAAAGCTGCCACTAGTTCCAATGGCGTTTCAGCTTTGAAATCATGTGGGATTTTTCCCTTTGACCCTACCAATATTCCCGATCACTATTTTGCACTGTCCGATTCTGTAAGAGATCAAAACTTGACGAATGATGAAGAAAATCAAACTTCACGAGACTCACCGTCTTTACTTGAAGACAATTATGACACTGCACTAATCCATGATAACGATATTATGCTGTCTAGAGCACAAATGACACCTGCATGCTATAACAAAGAACCTTTACAACAAAATTACAGTGATGTCGGTGATGAAAAGGTTGACTCTTCACTGCACAATCAATCCGATTCTGCTACTAAAGAATTATCTGAATCTAGGTTGGTATGTGATGAAGAACAGCAAGAGGCAAGAGATTTAGGTTCTCAACTGGATACATGTAGCGCTTCAAATCACCAAAATGTCTCAAGTCACAATCAAAACACTATGTCCCAACAGAGCGACTTTTTTAATAACAATATCGTAGTGGCCACAGTGAGCGTTCACTCAACACCACACAAGCAATCCGGTACTGTGCGTAAGACAAGGTTCACAGGATTAAATTCTAGCATATTGAGAAACATTGACGACTTAAATGAGGTAGAAGAAATATTTGACAATGTATCTAAGCCAGGACCATCATCAGTGAAAGCGGTTATTATGTCTAAAACACCTCAGAAAGACAAATCGTCTGAAACTCAAGAAACACCTAACAAGCTTTTAAGTACGATCCATCCAGTTCCCGTAATACCAGTTATGTCATCAAAGAGAAAACAAAAAGCTGTTGTCCTTACGTCTACAGAAAATATTGAGAAAAGAAAAGCAATTATTAGAAAAAGAAAACCAAAAGTTCAACCTAAAGAAAAAGTCTTAACTAAAAAAGCAAAAGGAAAAAAGACTGGAGAGAAAAAAGCAACTAAGAATAAGGATCCCGATATGACGGATATTTCTGAAGACGAGAACACAGATCAAGCTAAAAATCTTAAACAAACCAAATCAAGAGCACAGAAGGGAAAATCAGGGAAAGCAAAGGGTATATGTGAATATTATAGGTCAAATGGGTCTGAAAATGAAACCTCTGAGAATGATCAAACTACAACATTAACACAGGCTAAAAGAGTCAAGAAAAGAATATTCGAAAAAACAAGAAGCGATAAAAATAATAAAAAACAAGATGCCGCCAATATATCAGAAAATGATGACTCAAGCCATGATCAAGAAAATACAAGTAAGAAATCTAAAATTGAAAAGAATACAAAAAAGCCAAAGAAAGGTCAGATAAAAAAGAAAAAAGTAGTTTATTCGTCGTCTTCTGAGTCAGTAGAAGAAATTGATGATGAAGTTGGTACGTCTGAAGAAGAAATCTCGGACTTGGATGAAAACAAGTGCATTGAATGCACAGAAAATTTTTACAAAACTAAATCATCCGAGGATTGGATTAAATGTTCAGTTTGTTCAGGATGGTTGCATGAGTTTTGTACTATATTACTTCTTCCGTTATACGCGTTATTTATATTTTGCATGAGCTACGTACTCCCTTACGTCGGCTCCGGGCCAGTGTGGCCCAGGATGGTAAGGAAAACCTTCGAGCCCTGCGCCAGGTCTTGGTGGAGGAACCTACTCATGATCACCAATAAGGTGGATGATCTATCTATATGTGGTGAAACTACTTGGCACGTTATATGTGACTTCCAACTCTCAGTCCTGGCCACAGTCATCTTTATTATATACAGAAAGAGCGAACGAATAGGGATCTTAACTGGTTCTCTGGTCTACGTGTTGTCGGTGGCCTGGGCTGCTGTATGCAACTACCGACAGGAGCTTCCTGGTATACTCTGGTATGATTTTGGAGAGAGCCCGGATTCAGCAACAAACAAGGTGTACGAGTTGATATATAGGCGTTCCTACATCCGAACTAGTACATATCTAATTGGAGTTGCAATGGGGTATCTCATGACTGTCTATAAACCTCACTACTATAGGAAAACTCTATCAAAGGGTATGTCGATCCTAGCGTTTGTCATAGGCATGAATATATTGGTATCGACTCTACTGATTGGAGTTAAAATGCATAAAAGAGAGTTTAGTATGCTGGCTACAGCTCTGATTGCAGCGTTCGACAAGTCACTCTGGTCTATAGGAATCTGCATCATCATTGTTGTGTGCGAATATGGAACATTACCTATTGTACCAGACTTCCTTGGCAGCAAACTGTTTCTTCCGCTCAGCAAACTCACTTTTTCTGTCTATTTATTCCATATAATATTCCTGTACAGAGACAGATTTTCTATAAGAGTGGTGACGAAATATGACACGGTTGAATTGATTACTGCTGGTTTGGGATATGTGGTGATATCAGGTTCACTTTGCTTCCTTATCTGGCTGTTCATAGAAGCGCCTGTCACAAACCTAATCAATATCTTATTTAATTTAAACAGCACAGTTGAAGATTACGCCGAAGCATCAACAGCTGAAGGAATGGATATAGATTTAGATGATTTTACAAATATCAAAAATATAGAAGTATCTAAACCAACTCGAGCTAAACGATTTGCATTAGAAGATTTCGCAAAAGATTACAGTGAGCTTCCAAAAAGGAATGTGATAGTAGACTATTTATTTCTTGAAGATATCTCAACAGTTCACGAAGATGTTTTTGTAACAAAGATTGTAAAAGACTTGGTGGATGAAAGTAATAAAAGTGATACTGATGTTGAATACGTAAATGTTACATCAAAAAATTTACCGGAAAATTTTGTTGAAGTCAAAGATGTGCAGTTTAGTGAAATAAATAAAGTGCTGTCTGAAATATCGAGTTTTATACAACAGGATATAACGGATCAGTTGAAAACGCAATCAGAAGGTGTTGTATTTGAAAATGTAAATCCGAAAACTAAAGTCTTCGTACAAACTTTTACTTATAGCAACGATGGAAGTGTTTTACTGCCTAATTTAGAAAATATCAATATAAAAGAAGAATTAGTTACAGAAAAAAGGCAAGAAAAAGAAGCAGTAGTTGAAGAAAGATCTTTTTTTATGGTAACTCCTCACACGACAACTGAAAGTGACGAATTGAAGCTAATTAAAAAGCAAAAGGATATCAGTGAAAATGAAATACCACAGACCGACGACATACTTTCGTATTACGATTCCATAGAAGACAATTCAACAGACTATCCTATAATAGACTATGTAGAGCTATACAAGGATACTACAAACGAAGAAAATATTTATAATCCCACGGAAGTTACAATAACTGATGATATTCGGGATCATATTCAGGAAAAAATTGTGGAATACGTTGACAATATGGAGAAGTTTATTGAAGATATAAATAACAGCACGGAAGACAATTCGACGGAGGTTTCCACGATATTCCCGTGGATCTCAACTATATTCCTGAAGAACGACAGCAAGAGCAATCAGTTCGAGTACAACTGCGACGGCGCGCTGTTGAACGACCGCCTCCTGATTACAGCTGCTAGATGTGTAACAGTGGGAAACACCACCGTGGAACCTGACAGCCTTCTGGTGGTTCTAGGGAAACGGTCCCTACTTTCTATGGCTGATCAGGAACAAGCCGTCAAGataaaacaaaTCATAACCCACGATAACTTCACGACCGACGACGGCACAGTTGAACACGACTTGGCTTTGCTGGTGCTTGGTAATCCAGCTGTCTTCAACGAAATCATCCAACCAGCGACCGTCGGAAACGATACTGAAGGCATCGACAAATATTTTACGACAGCGTGGAATCTACAAGGCGACATAGTACCAGTAGCTTTAGAAGATAAAGATGCCCAAGCTTGTAATGTGAAGAACGTTGGAGAACACATGCTCTGTGCTTCTTATGGACTAGATGTGGCCCTCTGCCCAAGTTACGGAGGCATCTTCGCTGGCTACCAAGCTGGCGGCTGGAGGCTGTACGGCCTCAGATCAGGGAATACCACGGATAGAGGCGTCTGTTTCGACAAGAATATCTGGTTTACAGACCTGGGGGCCTATGTGGACTGGATTGTGGAGCATTTTGAATAA
Protein Sequence
MVTRCFCLTRNFDALTEVHKDDIKMVTGMRALTCGMLIVGHLLFLSQTTFVNQMDAENTMSRRYERKTLLASWSAEDLEKAMQCVRSKEMGVNEASRNFNIPSRTLRRHLITGRSKVPLGRNPVFSNKCEKKLVAHIKKLESVGFAPKRKDVKEMAFQLAEKLNIKNPFSKTNEVAGNVWFTGFMARNPELSQRKSEGLSLSRAYGVNREDVKEFFDLLTKIYEEHDFTNHPEDIFNMDESGIQINNKPGKVIATKGDRDVYTLTSCEKGENVTVIACCNAVGNFLPPTLIYKGVYNKPQFSEGLPPGSQVFMNKKSSYINADLFMKWFEDVFLRHKSSRKTLLILDGHSSHSNNIRLLEVAKENDVILLCLPSHTTHALQPLDRAFFRPLKVYFTQEAKSWMVRCKDKKLTRYDVAQLIGRAWGKAATSSNGVSALKSCGIFPFDPTNIPDHYFALSDSVRDQNLTNDEENQTSRDSPSLLEDNYDTALIHDNDIMLSRAQMTPACYNKEPLQQNYSDVGDEKVDSSLHNQSDSATKELSESRLVCDEEQQEARDLGSQLDTCSASNHQNVSSHNQNTMSQQSDFFNNNIVVATVSVHSTPHKQSGTVRKTRFTGLNSSILRNIDDLNEVEEIFDNVSKPGPSSVKAVIMSKTPQKDKSSETQETPNKLLSTIHPVPVIPVMSSKRKQKAVVLTSTENIEKRKAIIRKRKPKVQPKEKVLTKKAKGKKTGEKKATKNKDPDMTDISEDENTDQAKNLKQTKSRAQKGKSGKAKGICEYYRSNGSENETSENDQTTTLTQAKRVKKRIFEKTRSDKNNKKQDAANISENDDSSHDQENTSKKSKIEKNTKKPKKGQIKKKKVVYSSSSESVEEIDDEVGTSEEEISDLDENKCIECTENFYKTKSSEDWIKCSVCSGWLHEFCTILLLPLYALFIFCMSYVLPYVGSGPVWPRMVRKTFEPCARSWWRNLLMITNKVDDLSICGETTWHVICDFQLSVLATVIFIIYRKSERIGILTGSLVYVLSVAWAAVCNYRQELPGILWYDFGESPDSATNKVYELIYRRSYIRTSTYLIGVAMGYLMTVYKPHYYRKTLSKGMSILAFVIGMNILVSTLLIGVKMHKREFSMLATALIAAFDKSLWSIGICIIIVVCEYGTLPIVPDFLGSKLFLPLSKLTFSVYLFHIIFLYRDRFSIRVVTKYDTVELITAGLGYVVISGSLCFLIWLFIEAPVTNLINILFNLNSTVEDYAEASTAEGMDIDLDDFTNIKNIEVSKPTRAKRFALEDFAKDYSELPKRNVIVDYLFLEDISTVHEDVFVTKIVKDLVDESNKSDTDVEYVNVTSKNLPENFVEVKDVQFSEINKVLSEISSFIQQDITDQLKTQSEGVVFENVNPKTKVFVQTFTYSNDGSVLLPNLENINIKEELVTEKRQEKEAVVEERSFFMVTPHTTTESDELKLIKKQKDISENEIPQTDDILSYYDSIEDNSTDYPIIDYVELYKDTTNEENIYNPTEVTITDDIRDHIQEKIVEYVDNMEKFIEDINNSTEDNSTEVSTIFPWISTIFLKNDSKSNQFEYNCDGALLNDRLLITAARCVTVGNTTVEPDSLLVVLGKRSLLSMADQEQAVKIKQIITHDNFTTDDGTVEHDLALLVLGNPAVFNEIIQPATVGNDTEGIDKYFTTAWNLQGDIVPVALEDKDAQACNVKNVGEHMLCASYGLDVALCPSYGGIFAGYQAGGWRLYGLRSGNTTDRGVCFDKNIWFTDLGAYVDWIVEHFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-