Basic Information

Insect: Lycaena phlaeas
Gene Symbol: ZIPIC
Assembly: GCA_905333005.1
Location: HG995183.1:770848-779677[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 7.2e-05 0.006 17.5 1.2 1 23 219 241 219 241 0.98

2 10 6.1 5e+02 2.0 0.2 1 20 248 267 248 271 0.71

3 10 0.67 56 5.0 2.7 1 23 275 297 275 297 0.94

4 10 0.00043 0.035 15.1 2.0 1 23 302 324 302 325 0.96

5 10 8.9e-05 0.0073 17.2 0.4 1 23 329 352 329 352 0.97

6 10 0.0065 0.54 11.4 0.1 1 21 361 381 361 382 0.94

7 10 0.12 9.8 7.4 0.0 3 23 395 415 394 415 0.92

8 10 0.00021 0.017 16.1 1.5 1 23 419 442 419 442 0.97

9 10 4.6e-06 0.00038 21.3 1.6 2 23 462 483 461 483 0.97

10 10 0.026 2.2 9.5 0.4 1 11 489 499 489 506 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	7.2e-05	0.006	17.5	1.2	1	23	219	241	219	241	0.98
2	10	6.1	5e+02	2.0	0.2	1	20	248	267	248	271	0.71
3	10	0.67	56	5.0	2.7	1	23	275	297	275	297	0.94
4	10	0.00043	0.035	15.1	2.0	1	23	302	324	302	325	0.96
5	10	8.9e-05	0.0073	17.2	0.4	1	23	329	352	329	352	0.97
6	10	0.0065	0.54	11.4	0.1	1	21	361	381	361	382	0.94
7	10	0.12	9.8	7.4	0.0	3	23	395	415	394	415	0.92
8	10	0.00021	0.017	16.1	1.5	1	23	419	442	419	442	0.97
9	10	4.6e-06	0.00038	21.3	1.6	2	23	462	483	461	483	0.97
10	10	0.026	2.2	9.5	0.4	1	11	489	499	489	506	0.87

Sequence Information

Coding Sequence: ATGAATGAGACATTGGCCTGTAGAATATGTTTAGCTACTGATAATGTTAAATTGTACGATTTAAACGGTATGGTAAATCTGAAAGCAGCATACGAAAATATAACCGGGACGCAGATATCTGACAAGGATGGGTTGTCCCAACAAATTTGCTGTTTCTGCAGCACGCTTTTACTTAAATATATATCATTTAAAGAAAAATGCTGCTATACACAAGACATTTATAAATACTTGGTGAGAAACCAGAAGGAGATAACAAAAGAGGACATTTTGTTATTACAAAAGCAGTTCACAAATCTTTCACAATCCAATATTTTACCAATCATAGAAATAGAGTATAAAGAACCAAGCATTAAGGAGGAGTTTGAAGTGAGCATAGACAGTATTATTAAGTTGGAAGCTGATGTAGTGAAGAAACGTAAAAAGCGAACCATAAAAAAGAAAAAGCTAAAAAATGAGAGCTATCAAGATCTGGACATTAAATTTGAGGATTTTGGTGGAATGGATATGGATAGCGACATTGAGCAGGATAGTCCTGTCGAGGCAGCGGATGAAATTATAGACTTGAATGAGACCGAAATGGTGATACTGAGTAAGGAAGAACAGATGGAGGAGATGGAGGCTCGGAAAACCTCGTCCAACTACACACAGTCAGTGTACAAATGCGACAAGTGTTATAAGGGGTTCATTACGGAGGCCACATTCAACAACCATATGGTCAGGCACGATCCTAAGAGCGGCGAGCACGTGTGCGACATCTGCTACTTCAGGTGGTCAGAGGCGCGGCTGCTGCGCTCGCACGTGGTGGCCTCCCACGAGAGGAAGTACATGTGCAAGCTGTGCGACCACGTGTCCAGATCAAGTTACCGTGCTAAGGAGCACTTCAAATGGCATAACGGGTTCAAGTTTGAATGTAAAATATGTGGAGCTACTTTCGGCAAGTCGACTAGCAAGCTGACCCACATGCGGCTGCACCACCCGTCGAAGCATTCGTGCGAGATCTGCGGCGAGTCCTTCATAGGGGAGTACGGGCTGAAGATGCACAAGCGGAGAGCCCACAGGGACGTCATGGAGGATACCACACACCAGTGCGTGCAATGCGACGTCAGATTCCAAACCGTGGACGCACTCACCAAACATCTAGAGGTCTCCAAGAATGGACTCTGTGATCCCAATTTAAGGCCGTGTCTACAGTGTGGAGAGGGCTATGAAACCGACGACCTGCTCAGAACACACGCGACGGAACATCAGAATACGTTCACTTGTGAAGAGTGCCAAAGAAGCTTCAACAACGAGCGGTCGTACTCGATTCACTACCAGCGCGTGCACCTGGGCGTGAAGCTGAAGCAGTACAAGCCGACCCTGCGGCGCGCTGCCGACACCGTCGTCTGCGAGATCTGCGGCAAGAAGTGCATCACCAAGGCGACTTTGAGGTACCACCAGCGAACACATACGGGAGAGAAGCCTTACCAATGCACCGAGTGTCCCAAGAAGTTCAGTGTGTTCCAACGTCTTCAGGTATTCACAGACGTACCCACACCGGTGAATGCCCGTACAAGTGCAAGCTTTGTCCCAAGGCTTTCAAACATAAAGCGGCTCTCAACAGACACGATCGAGTGCATACGGGAGCCAAGCCATACAGCTGCTCTCACTGTGGAAAGTCATTCTCACAATCCAACTCGATGA
Protein Sequence: MNETLACRICLATDNVKLYDLNGMVNLKAAYENITGTQISDKDGLSQQICCFCSTLLLKYISFKEKCCYTQDIYKYLVRNQKEITKEDILLLQKQFTNLSQSNILPIIEIEYKEPSIKEEFEVSIDSIIKLEADVVKKRKKRTIKKKKLKNESYQDLDIKFEDFGGMDMDSDIEQDSPVEAADEIIDLNETEMVILSKEEQMEEMEARKTSSNYTQSVYKCDKCYKGFITEATFNNHMVRHDPKSGEHVCDICYFRWSEARLLRSHVVASHERKYMCKLCDHVSRSSYRAKEHFKWHNGFKFECKICGATFGKSTSKLTHMRLHHPSKHSCEICGESFIGEYGLKMHKRRAHRDVMEDTTHQCVQCDVRFQTVDALTKHLEVSKNGLCDPNLRPCLQCGEGYETDDLLRTHATEHQNTFTCEECQRSFNNERSYSIHYQRVHLGVKLKQYKPTLRRAADTVVCEICGKKCITKATLRYHQRTHTGEKPYQCTECPKKFSVFQRLQVFTDVPTPVNARTSASFVPRLSNIKRLSTDTIECIREPSHTAALTVESHSHNPTR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -