Lphl005254.1
Basic Information
- Insect
- Lycaena phlaeas
- Gene Symbol
- zfy1
- Assembly
- GCA_905333005.1
- Location
- HG995183.1:2473149-2489123[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.067 5.6 8.2 1.2 1 23 286 308 286 309 0.94 2 10 0.068 5.6 8.2 0.1 1 23 316 338 316 338 0.97 3 10 0.0097 0.8 10.8 1.9 1 23 342 365 342 365 0.94 4 10 2e-05 0.0016 19.3 0.8 2 23 392 414 391 414 0.92 5 10 3e-05 0.0025 18.7 0.5 1 23 420 442 420 442 0.98 6 10 0.0012 0.1 13.6 1.7 3 21 459 477 458 482 0.93 7 10 1.8e-05 0.0015 19.4 2.4 1 23 490 513 490 513 0.94 8 10 3.4e-05 0.0028 18.6 0.2 1 23 518 541 518 541 0.97 9 10 4.2e-07 3.5e-05 24.5 2.5 2 23 549 570 548 570 0.97 10 10 7.3e-06 0.0006 20.6 3.0 1 23 576 599 576 599 0.96
Sequence Information
- Coding Sequence
- ATGGCGCGCTTGGCGGACAATTTAATATACTCGAAATATTCAAACAAGAAACAAGCAAACCTTAATGAGTGTCTTCTCAGCGAAGTGAGGAGACCGTCGCATCTGAAAATACATAAAAATGAAAATATAAATGCACTTCCAGACTGTACAGAAGAACTTGAAAATGTAAAGGCTGAAAGAGACACAGGTACAAGCTTGCACAGAGACTCGTCCGAAGATGTGTTCAAAACAGAGGTTCCGGATATTGTATCTGTGTTGTGTGACAGTAAGAAACAGCATAGTCGCAAATCACTATTGAGTGGTGTGAGGAGACAGTCTCGTGTGAAGACTGTTAGCGGTGAAACTGGGAACACTTGCGACGACGTTGACAGATTAGAAGTGAAAGAGGAGAAGAACGAAGACACAAGAGAGCGTAACGGCTCTGATTGTAGTGGAGAAATGAAAGGAGTGCCAGACGTAGTATCCGTTCTTTGCGATGTTAAAAAACAGAAAAGAAGGAAGGAATCTAAGTTGAAACCAGAGTGGAATCTGGATGATCTCGCCAGGGATTCCTATTACGATGGAGACGCGGTCGCGGCGGAGTCGGGAGGCTGTGGGGCTGATGATAACGATGACACGTTCCCAGACAGTTGTTACAAATCAGATTCAGGCGGGGCCGCAGAAGATGAGAAACCCACGCTCAAAAATAAAGCAGAGTCTTTAATAACAAAGATGAATAAAGTTGGAATGAAGTCTAGTCAGAAGCCTATAAAGAGCGACATAGCGTCGCTGGCGCGTGCGGTGGAGCTGTCGTACGGGGAGGTGCGGGCGGAGCGCGAGAGGCGCGCGCGTGCGGCGCGGTACGTGCGAGCGCCGCACCGCTGCCGCACCTGCCTGCTCGCCTTCGCCACGCCCTCCGCCGCCCGCGCACACCAGACGGACCACCACGCGCCGGAGCTGGGCGAGTACATATGCCCGATATGCTACATCATAGTGGCCACGGTGGAGTCCTTCACGAACCACTACGACAGACACATCAAGAGATACGAGTGCAATATTTGCCAGAAGCGGACCGAGGACGTGAAGACGATGAGACGCCACCTGCACGCACGCCACCCCGCCGCCGTGCGACGCGGGCGCGCACTCGACACGCCCAAGAAGCAGACTATGGAGGGTCGTCGCGGCGGACGCGTGTCGTGCTCTGACTGCGACAAGACGTTCAGCCACCGCGCCGGCCTCATGAACCACCGCCTCGCAATGCACGAGACAAAAAGCCAGTACCCGTGCGGCGTGTGCGATAAAGTGTTCCGCTGGAAGACCAGCCTCAAGAGACATCTGGAGAAACACCAATCCAAGGAGGCGGGCGGCGCGGCGAGCGCGGTGGGCGTGGCGTACTGCGTGGAGTGCGACGTGCGGTTCTCGTCCGCGTGCTCGCTGCAGCGCCATCTACGGAACAGTCTGAAACACGTGACACAGGACCAGCTCAAGTTCATATGCGAGCATTGTAACAAGCGGTTCGCGGACAAGACCAAGCTGCGGAACCACATCGAGGAGAAACACCTCCACTGGACCTACACCTGCCAGATATGTAATAAGCCGTCGAAGAACCGCGTGGGTCTGGAGCAGCACATCCGCAACGTGCACAAGGGCCGGCCCCACAACAAGGTCTGCCACCACTGCGGCAAGGCCTTCCCGACCAAAGTTCAGTTGGAGTCGCACATCCGGTCGCACACGGGCGAGCGGCCCTTCATCTGCGAGTTCTGTCCGACCACCTTCTCGCAGCAGTCCAACCTGTACAAGCACCACCGTCAGGTACACCAGAATATCAAGTCGAAGAGATACCCCCTTTGCAAAAAAAGGAGAACGGAAGTTCAAATAGTTGATCCTCAGCAACAGGAGGGTTTGCCGGTCCCTTCTTTACTGTACTACGAGAACATTCTAGGGGTCTGA
- Protein Sequence
- MARLADNLIYSKYSNKKQANLNECLLSEVRRPSHLKIHKNENINALPDCTEELENVKAERDTGTSLHRDSSEDVFKTEVPDIVSVLCDSKKQHSRKSLLSGVRRQSRVKTVSGETGNTCDDVDRLEVKEEKNEDTRERNGSDCSGEMKGVPDVVSVLCDVKKQKRRKESKLKPEWNLDDLARDSYYDGDAVAAESGGCGADDNDDTFPDSCYKSDSGGAAEDEKPTLKNKAESLITKMNKVGMKSSQKPIKSDIASLARAVELSYGEVRAERERRARAARYVRAPHRCRTCLLAFATPSAARAHQTDHHAPELGEYICPICYIIVATVESFTNHYDRHIKRYECNICQKRTEDVKTMRRHLHARHPAAVRRGRALDTPKKQTMEGRRGGRVSCSDCDKTFSHRAGLMNHRLAMHETKSQYPCGVCDKVFRWKTSLKRHLEKHQSKEAGGAASAVGVAYCVECDVRFSSACSLQRHLRNSLKHVTQDQLKFICEHCNKRFADKTKLRNHIEEKHLHWTYTCQICNKPSKNRVGLEQHIRNVHKGRPHNKVCHHCGKAFPTKVQLESHIRSHTGERPFICEFCPTTFSQQSNLYKHHRQVHQNIKSKRYPLCKKRRTEVQIVDPQQQEGLPVPSLLYYENILGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00787054;
- 90% Identity
- -
- 80% Identity
- -