Basic Information

Gene Symbol
Zbtb41
Assembly
GCA_905333005.1
Location
HG995183.1:3899691-3917861[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.00056 0.047 14.7 2.3 1 23 19 41 19 41 0.97
2 16 0.0044 0.37 11.9 2.3 1 23 47 70 47 70 0.95
3 16 9.1e-05 0.0075 17.2 2.0 2 23 77 98 77 98 0.97
4 16 1.5e-05 0.0013 19.6 0.4 1 23 104 126 104 126 0.97
5 16 0.0026 0.21 12.6 6.2 1 23 132 154 132 154 0.98
6 16 0.00011 0.009 16.9 1.2 1 23 161 184 161 184 0.93
7 16 4.5e-05 0.0037 18.2 0.9 2 23 193 215 192 215 0.95
8 16 3.6e-05 0.003 18.5 0.4 2 23 222 243 221 243 0.97
9 16 2.5e-05 0.0021 19.0 0.4 3 23 251 273 249 273 0.91
10 16 0.00019 0.016 16.2 0.6 2 23 280 301 279 301 0.96
11 16 0.00016 0.013 16.5 0.8 2 23 309 331 308 331 0.94
12 16 0.00065 0.054 14.5 1.3 1 23 337 360 337 360 0.98
13 16 0.00059 0.048 14.6 6.6 2 23 367 389 367 389 0.96
14 16 5.6 4.6e+02 2.1 6.3 1 23 770 792 770 792 0.90
15 16 1.6 1.3e+02 3.9 0.2 2 23 803 823 802 823 0.84
16 16 0.011 0.91 10.6 3.5 1 23 944 966 944 966 0.98

Sequence Information

Coding Sequence
ATGAATGTCCACACGAAACGGGCATCAAAAACTTATAACCACCCAGGGGGGAAACATAAATGTAAAATTTGTAAGAAGAAATTTACCGAAAAAGCTGGATTGGACCAACATGTCCAGCTGCATTCATCAGACAAACTATTTGCATGTCACCTGTGTACGTACACGGGTAAAACACAGAAGTACCTGAACAGGCATGTGAAGCTCGCCCATGTCCCTGCTACATCTAATGAATGCAGCTATTGTGGGAAGAAATTTCATTATCGTTCTAAACTTAATGAACATCTAATTGTGCATACAAATTCCAAACCATACAAATGTGATATTTGTGGCAAAGGCTTTAATTCCTCCTATTCACTGGGGAATCACAACAACATACATAAAGACTCCAAGCCGTTTAAATGTCTGTACTGCGAATACGCTTGTCGAGACAGCTCGACGCTGAGAAAGCACCACGAGAGGCACACTGGCATCGAAAGAATATATCAATGCGCTACCTGTTCGAAGAGTTTTAAAAAGAAATATCTTCTTCGTGAACACGTGTCGGAGGTGCACCTAAACATAGACCTGAAGACGAAGCCCTGCCAGCGCTGCAGCAAGATGTTCAAGTCGACCTCTGATCTAAATAAGCATATCCAAATAGTCCACGAGAAGATATACGAGACGCGGTGCGACGTCTGCGACATGGTGCTGAGCAACCGCTACAACTTGGAGACGCACCTGCGCTCGCACCTCCGGCTCCGCCCATTCCTCTGCGGCGTGCGCGGCTGCGGGAAAACATACAAGGATAAAAGTTCTCTTCAAAAGCACACCATAATACACTTCCCTGAGAAGCAGTGGGTGTGCGAGATATGCGACAAGCGGTTCACGAGGCTGGGCCGGTACAAGAGCCACGCCCGCCAGCACCAGCCCAGGGAGAAGAGCGTCGTATGCGACCATTGCGGAGTCGGTTTCTACAGCAAGAATTACCTGCGCAATCACATGATCAACAAGCACCTGGCGCGGAGACAGTACGTGTGCGACCACTGCGGCTTCTGCTCCGGCAACAAACCGGGGCTGGTCAAACACCTCAGGATGGGGCACGACGCGGAACTGGACCGGCGGTGTAGAATATGCAACAAAACATTCAAGAGGCACACGTACCTCAAGTCGCACTACCGGAACAAGCACTTCATCAAATACAAGACGACGATCCGACCGAAAAAGGCAGTCATCAAACAGGAGCCACTGGAGGAGCCAGACGAGGCGCAGAACATGCTAGAACCTCAACACGAGATGATGCCTGAATCGGAGGCGGACATAAATGCGATGGATGTGAAGGCGTTGATGATGAATGCCGTGGAAGCGACCTCCGAGGGGCTGGAGACTCTGTTCATGGACCTGCTTAAACCACCAGAACAAGTCAAAGAAGATTATTCAATGTTATGTGACTCGGCGTGCGAGATGAAGGCTCAAAAACGTCTAAGACAACTGCTGAAGAAAGCGCAGCAGAGGAAAGAAAGAAAAGAAAAAGTTACAGTAATTTTAGAGCATTATTCAATCGAAGGGAACAAAGATGCAGTAACATCAGACATTTATGGCGAAGTCAGTACTGAAACAGATTCAAAACTACTCAGTGAGACTAATAACAAAGAGGAAATAAATAGTTCAGTTACCCAAATAACTTGTAATGCTGATGAGGGCAAAAATATAAATACAGAAACTAATAAACAACTACATTTATCGAGTGTAATTAAACTAGACAAAACACAAGAAATATTGAGCACAAGAAGCAGCGGTTTAAAAAAGAAAAAGGCTCAAGGAAGAGGCAAATCAATTCGAAGTAATATCAAAAAGAAAAATAAAAGCATGAGACAACTGAAAAAACGTTCATACTCTAAACTTAGTAAAATTTCTAAACATTCACCTCATGTACATACGGATGATTGTAACGAAAATTACGAGGAAAGTAAACATACAAACCAAAGATATAGTAAGACAAATGAAAGTAATATTGAGCTTATAAATGAAACTTTAGAAGGGAATCAAAACGAATCAATGTCTATCGAGGTAAGTAATAAACAATTGCCACAAATTGAAGAGAAGAGAGAAAATATTGAAAATAGTCCAACATATCTTAAAAAATACAATAACGTTGAAGATTTGAGTACAAATAAATATGATACTAACCTTATTGGAAATGAAAATATACAAAATACTGAGTCAGAAGATGCTCTAAATAAAGGTAGCTTAGATCAAAATGAAGAGGACCCAACTAGTCAAAGCAGTGCCTCAACGACTAAACAAACAATGGGAATGAAATTTAATTCACATCAATGCTATCAATGTTTTAAGCTATTTGAAACCAAAGATAAACTTCTAGACCATTGCAAAGAACATTATAATTTATGTAACGAAACAATATTGAAAAAGTGTCCACTTTGTGATTATGTTACCACGTGGGATCTTGCCAGACATATTAAGTTAATGCACAACGTTGAAGTTAAAATAGGTCAACCAGGATTAAAAGAAATGGAAGACGAAACGGGCATTCGGTACTTTTACAACGTTGAAAATGAAATAGTGAATAAAATAGACGTCATCCCTAGTGTAAAAAATCTAAATAAACGAGCATACATAAAGTTAGATAAACTAAAAAGACAGGCTACAAACAAAGCAGTACAAAAAGCAAAATTAGTAAAGAAAGATCGAGAGTGGATAGTTGAGAAGTGCAATATTAATTTTAAAGCGGACGGTGTGATGATACCAGATTTGAAAAAGATAGGTGACGACTATTTTGAGAAACTAAAAATGATGGCTACTCTAGCTAAGAATGAGGGCAAAAAAATATTTTATCCGTGCAATAAATGCGAAAAAATATGCCAAACTCTCGCCGCCTTGAAATTGCATTACAGACATCACGATCCTAATAAAAAACCCTTTAAACCCAAAGTTTGGAAACATAAAATGAAAGGAGAACAAAAAAATATAGAAGCTAACGACAATAAAGAAATCGATACCACTAATCGATATAAAAAACCAAAACCGATTGTAAATAAGCATAAGTGTGATCCCGAGTTGAAGGAATTTTACGAAAACAATATAAAGGGAGGCGACATAGAGTTTTGGCAGTTTTTGAAAATCTACAACAAAATGACCAGAGAGAATGTCAAAGATTTTAAAGATTTAGAAAATAGGAAAGAATTTGGTACTCATGTTCCGGAAATTATTGAAAATGAAGATGTTTCCAATGCAGGCAGTACGTCTACACCTCTGGAATCAATTTCCAACACTTCGAGTCCGTTTGAGTCTTCCTTTAAAGTGACTACCAAAGTGAAGGTTTCGAGATTAACAAGTAAGGATGGGATTAAAAGAGTAATTAGGATAAGTAGAAAAGATTGTCAAAGACGAAATGAAATAAAACAGACGCTAAGGGATAAAATAAGAAAAATCACAGCTTCATAG
Protein Sequence
MNVHTKRASKTYNHPGGKHKCKICKKKFTEKAGLDQHVQLHSSDKLFACHLCTYTGKTQKYLNRHVKLAHVPATSNECSYCGKKFHYRSKLNEHLIVHTNSKPYKCDICGKGFNSSYSLGNHNNIHKDSKPFKCLYCEYACRDSSTLRKHHERHTGIERIYQCATCSKSFKKKYLLREHVSEVHLNIDLKTKPCQRCSKMFKSTSDLNKHIQIVHEKIYETRCDVCDMVLSNRYNLETHLRSHLRLRPFLCGVRGCGKTYKDKSSLQKHTIIHFPEKQWVCEICDKRFTRLGRYKSHARQHQPREKSVVCDHCGVGFYSKNYLRNHMINKHLARRQYVCDHCGFCSGNKPGLVKHLRMGHDAELDRRCRICNKTFKRHTYLKSHYRNKHFIKYKTTIRPKKAVIKQEPLEEPDEAQNMLEPQHEMMPESEADINAMDVKALMMNAVEATSEGLETLFMDLLKPPEQVKEDYSMLCDSACEMKAQKRLRQLLKKAQQRKERKEKVTVILEHYSIEGNKDAVTSDIYGEVSTETDSKLLSETNNKEEINSSVTQITCNADEGKNINTETNKQLHLSSVIKLDKTQEILSTRSSGLKKKKAQGRGKSIRSNIKKKNKSMRQLKKRSYSKLSKISKHSPHVHTDDCNENYEESKHTNQRYSKTNESNIELINETLEGNQNESMSIEVSNKQLPQIEEKRENIENSPTYLKKYNNVEDLSTNKYDTNLIGNENIQNTESEDALNKGSLDQNEEDPTSQSSASTTKQTMGMKFNSHQCYQCFKLFETKDKLLDHCKEHYNLCNETILKKCPLCDYVTTWDLARHIKLMHNVEVKIGQPGLKEMEDETGIRYFYNVENEIVNKIDVIPSVKNLNKRAYIKLDKLKRQATNKAVQKAKLVKKDREWIVEKCNINFKADGVMIPDLKKIGDDYFEKLKMMATLAKNEGKKIFYPCNKCEKICQTLAALKLHYRHHDPNKKPFKPKVWKHKMKGEQKNIEANDNKEIDTTNRYKKPKPIVNKHKCDPELKEFYENNIKGGDIEFWQFLKIYNKMTRENVKDFKDLENRKEFGTHVPEIIENEDVSNAGSTSTPLESISNTSSPFESSFKVTTKVKVSRLTSKDGIKRVIRISRKDCQRRNEIKQTLRDKIRKITAS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-