Basic Information

Insect: Lycaena phlaeas
Gene Symbol: -
Assembly: GCA_905333005.1
Location: HG995186.1:9098619-9106589[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.24 3e+02 2.1 2.2 13 29 123 139 112 150 0.70

2 15 0.025 32 5.2 1.9 19 38 157 173 144 178 0.83

3 15 1.9 2.4e+03 -0.8 5.4 2 38 169 201 168 206 0.70

4 15 0.02 25 5.5 3.5 18 38 212 229 198 234 0.81

5 15 0.00054 0.67 10.5 2.0 2 38 225 257 224 262 0.81

6 15 0.048 60 4.3 7.1 11 38 262 285 252 290 0.74

7 15 0.0023 2.9 8.5 1.7 18 38 296 313 287 318 0.82

8 15 0.0096 12 6.5 3.1 16 38 322 341 310 345 0.81

9 15 0.002 2.5 8.7 4.2 10 38 345 369 336 374 0.77

10 15 0.00053 0.67 10.6 5.5 10 40 373 399 364 402 0.76

11 15 0.015 18 6.0 7.0 1 38 392 425 392 430 0.88

12 15 0.039 49 4.6 5.4 13 33 431 453 420 457 0.71

13 15 0.71 9e+02 0.6 0.6 18 26 464 472 455 481 0.85

14 15 1.1 1.3e+03 -0.0 4.8 17 37 491 508 476 513 0.72

15 15 0.0011 1.4 9.5 6.8 1 43 504 542 504 543 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.24	3e+02	2.1	2.2	13	29	123	139	112	150	0.70
2	15	0.025	32	5.2	1.9	19	38	157	173	144	178	0.83
3	15	1.9	2.4e+03	-0.8	5.4	2	38	169	201	168	206	0.70
4	15	0.02	25	5.5	3.5	18	38	212	229	198	234	0.81
5	15	0.00054	0.67	10.5	2.0	2	38	225	257	224	262	0.81
6	15	0.048	60	4.3	7.1	11	38	262	285	252	290	0.74
7	15	0.0023	2.9	8.5	1.7	18	38	296	313	287	318	0.82
8	15	0.0096	12	6.5	3.1	16	38	322	341	310	345	0.81
9	15	0.002	2.5	8.7	4.2	10	38	345	369	336	374	0.77
10	15	0.00053	0.67	10.6	5.5	10	40	373	399	364	402	0.76
11	15	0.015	18	6.0	7.0	1	38	392	425	392	430	0.88
12	15	0.039	49	4.6	5.4	13	33	431	453	420	457	0.71
13	15	0.71	9e+02	0.6	0.6	18	26	464	472	455	481	0.85
14	15	1.1	1.3e+03	-0.0	4.8	17	37	491	508	476	513	0.72
15	15	0.0011	1.4	9.5	6.8	1	43	504	542	504	543	0.92

Sequence Information

Coding Sequence: ATGTCATATAATGATGTGGAGATCAAACAAGAACAAGTGGATTATCTGGAGATCAAACAAGAACAAGTGGATTATCTGGAGATTGAACAAGAACAAGTGGATTATCTGGAGATCAAACAAGAACAAGTGGATTATCTAGAGATCGAACAAGAACAAGTGGATTATCTGATGCTGCCTGATGGAGATGATTTTATAAAAATTGAAATAAAAGAAGAAAATCAACCATATTCTGAACAAAACTTGGACGAACAAAATGTTACTGCCGAAGAAAAAAGTAAAAACAATACTGAAGGGATTCAAAGCAAATGTGAAGATCCATTAAAGGACGACGAAGATAATTTAAATAAGCATAAGAGAACACACACGGGGGAGAAACTGTACAGCTGCGAATACTGTAATAAAAGTTTTTATGATCGCAGTACTTTAAACAGGCATAAGAGAACACACACGGGGGAGAAACCGTACTGCTGCGAATACTGTGATAAGAGATATTCTGATTCAGATAATTTAAAAAAGCATAACAGAACACACACGGGGGAGAAACCGCACTGCTGCGAATACTGTAATAAAAGTTTTTATGATCGCAATACTTTAAAGAGGCATAAGAGAACACACACGGGGGAGAAACCGTACTGCTGCGAATACTGTGATAAGAAATATTCTGATTCAGATAATCTAAAGAAGCATAAGAGAACACACACGGGGGAGAAACCGTACAGCTGCGAATACTGTAATAAGGAATTTTCTGATTCCAGTAATTTTAAGACTCATAAGACAACACACACGGGGGAGAAATCGCACTGCTGCGAATACTGTAATAAGAAATTTTCTGAAGGCAGTTCTTTAAAGAGGCATAAGAGAACACACACGGGGGAGAAACCGTACAGCTGCGAATACTGTAATAAGAAATTTTCTGAAGGCAGTTCTTTAAAGAGGCATAAGAGAACACACACGGGGGAGAAACCGTACAGCTGCGAATACTGTAATAAGACATTTTCTGAATTTAGTAATTTAAAGACTCATAAGACAACACACGCGGAGGAGACATCGTACAGTTGCGAATACTGTAATAAAAAATTTAATGAAGGCAGTTCTTTAAAGAGGCATCAGAGAACACACACAGGGGAGAAACCGTACAGCTGCAAATACTGTAATAAGAAATTTTCTATTGGCAGTAATTTAAAGAAACATACTAGAACACACACGGGGGAGAAACCGTACAGCTGCGAATACTGTAATAAGAAATTTTCGGATTGCAGTAATTTAAAGACTCATAAGAGAACACACACGGGGGAGAAACCGTACAGCTGCGAATACTGTAATAAGAATTTTTCTACTAGTAGTCATTTAAACACACATAAAATAACTCACACGGGGAAGCAACCGTACAGCTGCGAATACTGTGACAAGAAATTTTATAAGCTCAATGATTTAAAGAAGCATAAGAAAACACACACGGGGGATAAACCGTACAGCTGCGAATACTGTAATAAGAAATTTCCTAATTACAGTAAATTAAAGAATCATACAAGAACACACACGGGGGAGAAACCTTACAGCTGCGAATACTGTAATAAGAAATTTTCGGATTGCAGTAATTTAAAGACTCATAAGAGAACACAACACGCGGAAGAAACCAGTCATTTGTTGTGA
Protein Sequence: MSYNDVEIKQEQVDYLEIKQEQVDYLEIEQEQVDYLEIKQEQVDYLEIEQEQVDYLMLPDGDDFIKIEIKEENQPYSEQNLDEQNVTAEEKSKNNTEGIQSKCEDPLKDDEDNLNKHKRTHTGEKLYSCEYCNKSFYDRSTLNRHKRTHTGEKPYCCEYCDKRYSDSDNLKKHNRTHTGEKPHCCEYCNKSFYDRNTLKRHKRTHTGEKPYCCEYCDKKYSDSDNLKKHKRTHTGEKPYSCEYCNKEFSDSSNFKTHKTTHTGEKSHCCEYCNKKFSEGSSLKRHKRTHTGEKPYSCEYCNKKFSEGSSLKRHKRTHTGEKPYSCEYCNKTFSEFSNLKTHKTTHAEETSYSCEYCNKKFNEGSSLKRHQRTHTGEKPYSCKYCNKKFSIGSNLKKHTRTHTGEKPYSCEYCNKKFSDCSNLKTHKRTHTGEKPYSCEYCNKNFSTSSHLNTHKITHTGKQPYSCEYCDKKFYKLNDLKKHKKTHTGDKPYSCEYCNKKFPNYSKLKNHTRTHTGEKPYSCEYCNKKFSDCSNLKTHKRTQHAEETSHLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00925939;
90% Identity: iTF_00925939;
80% Identity: iTF_00925939;