Lphl022098.1
Basic Information
- Insect
- Lycaena phlaeas
- Gene Symbol
- kn
- Assembly
- GCA_905333005.1
- Location
- HG995176.1:5268152-5276588[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-116 2.5e-112 376.6 0.0 218 387 2 180 1 183 0.99 2 2 2.3e-10 3.1e-06 26.3 0.9 419 471 188 242 180 251 0.85
Sequence Information
- Coding Sequence
- ATGGTCGACGGTCCGCTCCTGGCGATATCGGACAACATGTTCGTCCACAACAACAGCAAGCACGGCCGCCGGGCGAAACGTCTAGATCCTTCTGAAGCGGGTCTCTACCCACCGTTGCCAGTAGCAACGCCGTGTATCAAAGCCATATCGCCGAGCGAAGGTTGGACGTCGGGCGGCTCCACAGTCATAATAGTGGGGGACAACTTTTTCGACGGACTCCAAGTTGTGTTCGGAACTATGCTCGTCTGGAGCGAGCTAATAACGTCACACGCGATACGAGTACAAACGCCGCCTAGACACATACCGGGAGTGGTCGAGGTGACACTGTCTTACAAGAGCAAGCAATTCTGTAAGGGCGCGCCTGGCAGATTCGTCTATGTTTCAGCTCTGAACGAGCCGACGATAGATTACGGCTTCCAGAGGCTCCAGAAACTCATACCGAGGCATCCAGGCGACCCTGAAAAATTACCCAAGGAAATCATCCTGAAAAGAGCGGCGGACCTTGCGGAGGCCCTGTACTCGATGCCCCGTAACAATCAATTGGGCCTGGGGGCCCCGCGCTCGCCTCCTGCGAGTATGCCCTTCAACTCGTACACGGGGCAACTGGCAGTTAGCGTCCAGGACACCGCCGCCTCGCAGTGGACTGAAGAAGACTACGCGCGCAGCGGCAGCTCTGTGTCGCCACGGTACTGTTCCGCCGCGTCCACGCCGCACGCGCCCGCCTACCCGCCGCAACACTACCCCGCACCCCCCACCTCACTCTTCAACACCACCTCCCGAATGGGTGGTCTGGTGTCAACACCCTTCAGCGTGAATCCCTTTTCGTTACCAACCTGCAGCGCGCAGCAGTACGCTCAAACCGCGCCCCTCGCTTCCAAGTAA
- Protein Sequence
- MVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEDYARSGSSVSPRYCSAASTPHAPAYPPQHYPAPPTSLFNTTSRMGGLVSTPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01362239;
- 90% Identity
- iTF_01362239;
- 80% Identity
- -