Basic Information

Gene Symbol
Arid5b
Assembly
GCA_905333005.1
Location
HG995164.1:22277601-22332396[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-14 1.8e-10 41.6 0.1 2 89 300 374 299 374 0.91

Sequence Information

Coding Sequence
ATGGAGAAACGATCATATAAGTTGGTCGGTGCTCCATGTGGTCATCACGGTCAGTACACCTTCTACAAGGCCATCAAGCTGTCCGGCCTGCTGGAGAGGATCGTCGCCATCGGGGACTTCTTCTTCGTCAAGATATGGCAGGACTCGGAGCTCATCTCAATAGGTGAACTGCAGCTCCTATGGACGGACCGCGTGTCGGACCAGACGCTCGTGTCGCTGAGGCTGTACTTCCTGCCCGAGAACACGCCGGACGGCAGGGGCCTGCACGGAGAGCATGAGGTCCTGGCCATCAACGACAAGGTGGTGCTGAAAGCGGAGGACCTGCTGAGCTGGCTGTGCGTGGGCCGCGAGTGGCGCTGGGGCCTCCGCGCGGTGTGGCGCGGCGACTGCGCCCCGCCTGCCGACGCGCGCCCCTCCGCGCCCCTGCACCACACCCGCCTCGACTTTAGTGACATCGAGAAGGAAAAGAGCGCCATCACAATAGACGAGGAGAGCCCCGGCGTGGTGGTGTTCTCGTATCCGCGGTACTGTCGGTACAGGGCGCTGGTCGCGCGGCTGGAGGGCATACAGGCCAACTGGCTGCGGGACTCGCTGGTGGCGGCGCTGGGCGGGTACGCCGCCCCCACCAAGAATACCAGGATACTGTACTGCAAGGACACGTTCGAGTACCCGGAGCTGGAGGGGCACGAGTTCGTGTGCAACCACCTCTCGCCGCGGCTGAAGGGCCGGCCCCGGGGCCGCCGGCGCCGCGCCGCGCGCTCCCGCGACCGCTCGCCCGACTCACGCTCCAGCGACAGCGACCGCAGCCACGCCCCCGACCCCAAGACGCACAGGAGGCTGTCGCTGCGGAACGGGCCGGAGAAGGAGAAGTGCGAGAAGGAGCAGGAGAGCGCGCAGGACGAGGCCTTCATGGAGCAGCTGCGGGACTTCTACGAGGACAAGGGCGACGCGCTCAAGCTGGCTCACACGCTCAAACACCTGTCCCTGCGCCTCATCTACTGCCGCGTGCTGTCGCTCGGCGGATACGAGGTGGTCTGCCGCGACAAGCTGTGGCGCCACCTGTACGCGGACCTCGGCTCCAGGGTCCGGAGACTCTATGAAAAATGCCTCCTGCCGTTCGAGAACTACGAGAGGCGAATCAGCAAGAAACTCTACCTGAAAGGAATCAACGGGAAAATAGACGACAAGTCAATAGACACCATAGAAGTAGCGGACTCTCCCCTCAGGGAAGTCAACCTCAAGGCGGAACTGCCGGACAAGAGGCTCCGCACGCCGTCGCCTCCACGGGACAAGGACAAACTCATGCTGGACAACGAAACCGGAGAAATCGTGAAGGAGGAAATGAACATCACGTCGAAACCGGCCGAGGAGCTGAACAGGGAGTTCCTAGAGTCGCTGCCCGAGCCGAAGGAGGAGGAGAAGCCGGCCAAGATCTATGTAAAACCCGTGGAGAAGCTCATAGAGCCGAGCTTGAAGGGAGACGTCCTGAACGCCTTCAGCGACAGGGGACCGGGCGGACAAGACTCCTTCAAAGATAACGCTTTGGACGAGAAGGACGCTACACGGAACGACGGGTTCTTCAGTGAAGTAGCGCAGAAATTAAATTTAGGCAACTCCGACAGCCGGTTCCTGGGCGAGCTGGTGCACGGCTCGCTGCCGCTCTCTGAGCTGGCGGACCTGTGGGAGCGCGGCGCGGGCGCGGGCCCGGGGCTGCGGGGGCCCCTCGCCGACCTCACCGCGCTAGCCGGCGCGGACAAGCACAACGGACACGTGAAGAGCCGGCCGGCCGGGCGCAGCTCGCTGCGGGCCGTGCGCGTCAAGCCCACGCGCCCGCATCACGCCGCCGCCCACACGCCGCCGACGTCGACGGTGCGCGCGGACTCGGCGTCCTCCTCGCCCCCCGCGCCCGCCGCCGCCGCCCCCCCGCCCGCCGCGCCCCTCAACAACTTCGGCATACACCACCCGCCGCCGCACGCCGCGCACAGCGACGACGAGATCGTCGAGGTTCCCTATAAGCCCAAGAGTCCAGAGATCATCGACCTAGACGAGTATCCGGAGAGTCCGCAGGCGGTCAAGAAGAAGAAACTGGACATCCTCAAGGAGAGAGGCCTGGAGGTGACCGCCGTCCCTCCGGGGCCCGTTTGGCCGCACCCCCTAACCAACCCCATAGCCCCCCTAATCAATCCCAGTCCCATGATCCTGAGCGGCGCCGTTCAGCATCAGATCATGACCCAGGCCCAAATATACCAAATGTACAACATCATTCCCCCCAACTACCCCAACGGCATCCAGGCGCCCAAGGTGATCCAGGGCGCGAGCGCGTTCGGTTCGGCCGGGCCCGAGAAGACGGTGTACGGCAACCCCAAGGACCCGTTCATGCCGCCGCCACACGTGCTGGCGGGCGCGCCCGTCCGCGGCCCCCGCGCGCCCTCTCCCGCCGCCCCCGCGCCGCCCGTGCTCGACCTCACGCGCCGCGGGGAGTCCCCCGCGCCCGCGCCCGCCGCCCCCGCCGTCGAGATCGTGCGCCTGCCGCCCGCGCCCTCGCCGTCCAAGACGCCCACCGGCGTCCAAAACCTCTCCAAAAACTACACGCTCCTCGACGGAAAGGCGGTGGTCGGATCCAATTTGGAAATCACCTTAGTCAATCCCAAATCCCTGACGCCGCCCAAACGCCTGCCTCAGAAGAGGTCGTCGAATGGAAAATTCGCAGCGAAGACCCCGACGCCGCCCAAGGACTACAAGTACCCGCCGCCGTCGCCGTCCGGGGCCAAGAAGGCGCCCATTGTGGTGCCCAGCTACCAGGTGCGGGACGACACGTCTCCCACCAGCTCCACCGGCTCCAAGGACTCGCAAACCTCGCACGCGAACCTCCTCAACGCGTTTAAGGGCCAGGGGATGCCCAACCTGACCCCTTTCATGGACCCTCTGTATATGAACTCGTTCTACAGCAGCCTGGGCCAGATGGACCAGAGACAGCTGGCCATGTACCGGGACTTCATGGCCACGCAGTTCAGGGGCTACTCAGGCCTCCTGAACATCGGGACGCCCACCACCAAGAATTAG
Protein Sequence
MEKRSYKLVGAPCGHHGQYTFYKAIKLSGLLERIVAIGDFFFVKIWQDSELISIGELQLLWTDRVSDQTLVSLRLYFLPENTPDGRGLHGEHEVLAINDKVVLKAEDLLSWLCVGREWRWGLRAVWRGDCAPPADARPSAPLHHTRLDFSDIEKEKSAITIDEESPGVVVFSYPRYCRYRALVARLEGIQANWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLSPRLKGRPRGRRRRAARSRDRSPDSRSSDSDRSHAPDPKTHRRLSLRNGPEKEKCEKEQESAQDEAFMEQLRDFYEDKGDALKLAHTLKHLSLRLIYCRVLSLGGYEVVCRDKLWRHLYADLGSRVRRLYEKCLLPFENYERRISKKLYLKGINGKIDDKSIDTIEVADSPLREVNLKAELPDKRLRTPSPPRDKDKLMLDNETGEIVKEEMNITSKPAEELNREFLESLPEPKEEEKPAKIYVKPVEKLIEPSLKGDVLNAFSDRGPGGQDSFKDNALDEKDATRNDGFFSEVAQKLNLGNSDSRFLGELVHGSLPLSELADLWERGAGAGPGLRGPLADLTALAGADKHNGHVKSRPAGRSSLRAVRVKPTRPHHAAAHTPPTSTVRADSASSSPPAPAAAAPPPAAPLNNFGIHHPPPHAAHSDDEIVEVPYKPKSPEIIDLDEYPESPQAVKKKKLDILKERGLEVTAVPPGPVWPHPLTNPIAPLINPSPMILSGAVQHQIMTQAQIYQMYNIIPPNYPNGIQAPKVIQGASAFGSAGPEKTVYGNPKDPFMPPPHVLAGAPVRGPRAPSPAAPAPPVLDLTRRGESPAPAPAAPAVEIVRLPPAPSPSKTPTGVQNLSKNYTLLDGKAVVGSNLEITLVNPKSLTPPKRLPQKRSSNGKFAAKTPTPPKDYKYPPPSPSGAKKAPIVVPSYQVRDDTSPTSSTGSKDSQTSHANLLNAFKGQGMPNLTPFMDPLYMNSFYSSLGQMDQRQLAMYRDFMATQFRGYSGLLNIGTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00786554;
90% Identity
iTF_00786554;
80% Identity
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