Lphl023966.1
Basic Information
- Insect
- Lycaena phlaeas
- Gene Symbol
- retn
- Assembly
- GCA_905333005.1
- Location
- HG995182.1:4899418-4906577[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-18 9e-15 55.4 0.0 17 89 23 93 15 93 0.94
Sequence Information
- Coding Sequence
- ATGACCGATTCATCCATTTCTCTTTCTATATTTGAAATAAGTAGTGAAAGCGTTTGTTTTGTTCCAGGCACACCGATCACCCGTTTGCCGGTGATGGCGAAGACTGTGCTGGACCTGTGCGAGCTGTACAACCTGGTGGTGGCCCGAGGTGGTCTCGTGGCCGTCATCAACAAGAAGCTCTGGCAGGAGATCATCAAGGGACTACACTTGCCATCGTCAATCACGTCCGCGGCGTTCACACTTCGTACACAGTATATGAGATTCCTATACGACTACGAGTGCCATAAGAAGAATTTCTCGACCAAAGCCGAGTTGGACGTCGCAATAGAAGGCAACAAGAGAGAGGGAAGACGCCACTCGGTCGCCGCCAACCAGTACGCACAAGAGGTTCAGGCGCAGGCTGCTTTGTCTATGCCGCAGTTCAACCGGATGCCCTCAGTGCCGCCATATTCCCAGCACATGCAGTCCGTGCCGCTGACCGCCGCTGGCGCCATGCCGCACCTGCCGTCGCTGCCGATCCACCCGTCGCAGTACTCCCAGCGCGACATCGAACATCTGCAGAAGCTCGCCAGAATGCTGCAGGAGCATCAGCGCGAATTCTTACGTAATGCAGCTGAATCCCCCCCGACACCGCTGGAAGTGTCGCAGATGTGGTGGAACCTGTACAACCAGCACACCATCAATATGGAGCCGCAGCGTGAGGCCTTGAACCTAGCGGAGAGTCCCAACTCGACCATCAGCGGTATCAAGCGCGAGGCCAGCCCGCCACCTGTTCAGCCGCCCAAGCGACGCGCGACCCACTCCTCGTCCATGTCGATCTCGCCCTCACGCTCCCCCCGCCCCTCGTACGCCCGACACTCGCCCCTGCACTCCCGCTCCGCCGAGCACTCGCCCCGGGCGACCACCTCGGGGCCGGTGATGTCGCGCCGCGCGTCCGTTTCGCCCCGGACGTCGGTGTCTCCGCGCGCCGTCTCGCCCCACACAGCCGTTTCGCCCCGAGTCGCAGCACACAACTTGCCCACCCCGCCGCCATCTTTGACCCACTCGCATCCACCTCACGCGCATCTCAACGGCACGGCTTCCATATTGAACGGCGCTTCGTTCAGAATCACGTCAAAAGGTGACACGAATACCGGCGACCAAGAACTGAACGTGTCCATTGACCTCAACGGTATCACGTATGAAGGGATCCTGTACCCGTCCCAGAACGGCATGTAG
- Protein Sequence
- MTDSSISLSIFEISSESVCFVPGTPITRLPVMAKTVLDLCELYNLVVARGGLVAVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMRFLYDYECHKKNFSTKAELDVAIEGNKREGRRHSVAANQYAQEVQAQAALSMPQFNRMPSVPPYSQHMQSVPLTAAGAMPHLPSLPIHPSQYSQRDIEHLQKLARMLQEHQREFLRNAAESPPTPLEVSQMWWNLYNQHTINMEPQREALNLAESPNSTISGIKREASPPPVQPPKRRATHSSSMSISPSRSPRPSYARHSPLHSRSAEHSPRATTSGPVMSRRASVSPRTSVSPRAVSPHTAVSPRVAAHNLPTPPPSLTHSHPPHAHLNGTASILNGASFRITSKGDTNTGDQELNVSIDLNGITYEGILYPSQNGM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00786553;
- 90% Identity
- iTF_00786553;
- 80% Identity
- -