Basic Information

Insect: Luperina nickerlii
Gene Symbol: -
Assembly: GCA_963855955.1
Location: OY979691.1:1578693-1624365[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0009 0.1 14.3 2.8 1 23 475 497 475 497 0.99

2 11 0.12 14 7.6 1.1 1 23 516 539 516 539 0.91

3 11 0.013 1.5 10.6 0.4 2 23 546 567 545 567 0.95

4 11 0.00038 0.042 15.5 0.1 2 19 575 592 575 594 0.95

5 11 0.00029 0.032 15.9 7.8 1 23 610 632 610 632 0.95

6 11 0.00029 0.032 15.9 7.8 1 23 735 757 735 757 0.95

7 11 0.00029 0.032 15.9 7.8 1 23 860 882 860 882 0.95

8 11 0.00029 0.032 15.9 7.8 1 23 985 1007 985 1007 0.95

9 11 0.00029 0.032 15.9 7.8 1 23 1110 1132 1110 1132 0.95

10 11 0.00029 0.032 15.9 7.8 1 23 1235 1257 1235 1257 0.95

11 11 6.3e-05 0.0069 18.0 0.1 1 23 1262 1284 1262 1284 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0009	0.1	14.3	2.8	1	23	475	497	475	497	0.99
2	11	0.12	14	7.6	1.1	1	23	516	539	516	539	0.91
3	11	0.013	1.5	10.6	0.4	2	23	546	567	545	567	0.95
4	11	0.00038	0.042	15.5	0.1	2	19	575	592	575	594	0.95
5	11	0.00029	0.032	15.9	7.8	1	23	610	632	610	632	0.95
6	11	0.00029	0.032	15.9	7.8	1	23	735	757	735	757	0.95
7	11	0.00029	0.032	15.9	7.8	1	23	860	882	860	882	0.95
8	11	0.00029	0.032	15.9	7.8	1	23	985	1007	985	1007	0.95
9	11	0.00029	0.032	15.9	7.8	1	23	1110	1132	1110	1132	0.95
10	11	0.00029	0.032	15.9	7.8	1	23	1235	1257	1235	1257	0.95
11	11	6.3e-05	0.0069	18.0	0.1	1	23	1262	1284	1262	1284	0.98

Sequence Information

Coding Sequence: ATGGCGCTGTGTGAAAGTCAGCTGGACTCCGCATTGCCGCAGCTCAAGCGGGAAGAGTCCTCGAGCAGCGAGGGCAGCCAGAAGCAGACGCCCGAGAAAAAGACGAAAATCGACCATAACGGAGAGATTTATGGCCTGAACCAAGTGCCTAGCGGTCTGCCGCTGACAGTGGATTACCGCTCACCCGTGTCACACTTCGTGCCGCCCGAGTTGTATGCGGTGAGGCAGAAGCAGGAGCCGATAGCTACAGcTGAACCCAGCGAACCGCCGACTCCTGTCAAGCGGAAGCGAGGTAGACCCAGGGTGGACAAGACGAGCCCCGAGTATCTGGCCAACTTGGCGGCCAGAAAACAAGCCAAGGAGATGGccgcTATGATGAATAACAGGACCCCAGAAAGTGGGGAAAAGCGTAAGCGGGGAAGGCCACGCGTGGACAAAACAAGCCCAGAGTATTTGGCTAGAAAGAGGGCACGCGAGTTAGAAGCATTGGAGAGAAAGGCTAAGAGAGAGTATAAACGCCGCGCTACTGGAGATTCTGCAGCCTCATCGTCTGCTGGGGAGACAACTCCGAGGACCAAGAGAAAATATACTAAAAGGACTCCGAGCGCTAAGAAAGATGCTccTCCTTCGGTGGAGCGCGTAAAGGGCAAGCGAGGTAGACCGCGGAAGGTGGACCAGCTTGCAGCTAACAACAAGCAGCAACAGCAACCTAAGATACGCGTTAGAAATAATCTGATGCCAGTCAACTCTGAACCTATCACAGTGGACAGCGATGATGAACCGGATCTAGGATCACCGAGTCAAGCGTCAGATTCGCTGAGTTTGGACGAGAATCTGCGAGCGTTGAGACATATTCATGAGAAATATGCTAATATTGACAAGGATGATCTGTACGACACACACTTGCTGGCCGCTAACTTTAAGAAGCCGCACGACTCCCAGCGCAGAGGAGATGACGACGAGGTCCTGTCCGTTAGGAGTTCTGAAGGATGTGCTTCGGTTAAAGAAATGGAGACGAGGGTCGAGAAGCTGGAAGATAGTTCCAATTCCGACTCCGACAGCAGTAGTTCTGGATCTGAGCGACAAGCGGCCCCCTCTCAAAGTACGTCCGGATCCCGAAACATGcgtagcaGCAGTTCAAGTTCCGGAACCAGTTCGTCATCGAGCTCCGACTCCTCGAGCTCATCCGACAGTTCAGACACGGAGTCAGAATCTGGCGACGAGAAACCCAAGACTGAAGAGCCACCTCCGGTGGTCAATCATACTACTAATGAGGATGATAGGTCGTTCGGCGCATGGTCGTATAGCGGGCCGGCCTCCGACAGCGGGTCTGACTCGGATCCGGAACGCGCCGCGGATCCGGCAGCTCCGGCGTCGCACGATGAGATCAGCGAGTCGGAGAATGAGTCCGCTGATAAGAGCTTCCAATGTCATATCTGTTCCAAATGGTATTCTACGAGAGTGACATTAAAGATCCACCGCCGCGTCCATCAGAACCGCGGCACCGGCGGCAACCAGCGGTCGCGCGCGCGCTCGTCGGATCGATACGAGTGCGACTGTTGCAGTGAAACCTTCAACAGGCGCGAGAAACTATGGGAACACAAAGCGGAAGCACATCGCGGCGCCATGACGGTCCGATGTGAAGTCTGCCGGAAATGCTTCGAAGATGACGCAGAGTTGGCTGCGCATGATCGTACACACACTGCAGACGAACGTGCTGGGCGCTGCCCCACGTGCGGCCTGACGTTCCCGCGCTACGAGCAGCTGCGGCGCCACGCCGCGTGCGCgcacggcgccgcgccgccgcccggctcgGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGCACCACTACAATAACGCCGCCCGGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGGTGGGTGTCGCTACACTATAGCACCACTACAATAACGCCGCCCGGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGCACCACTACAATAACGCCGCCCGGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGGTGGGTGTCGCTACACTATAGCACCACTACAATAACGCCGCCCGGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGCACCACTACAATAACGCCGCCCGGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGGTGGGTGTCGCTACACTATAGCACCACTACAATAACGCCGCCCGGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGCACCACTACAATAACGCCGCCCGGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGGTGGGTGTCGCTACACTATAGCACCACTACAATAACGCCGCCCGGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGCACCACTACAATAACGCCGCCCGGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGGTGGGTGTCGCTACACTATAGCACCACTACAATAACGCCGCCCGGCTCGGCGCGCCTGCCGCACGCCTGCGCGCAGTGCGGCAAGCGCTTCAGCCACGCGCACTCCCTCACGCGCCACATGCACAACCACGCCAAGCAGCTCTACCGCTGCGTCGTGTGCAAGGCGTCATTTGCGCGAGCAGATCAACTGGCGCAGCATCTGAACAGCCACCTCGCGAACTACAAGCGCCTGAAGCCATGA
Protein Sequence: MALCESQLDSALPQLKREESSSSEGSQKQTPEKKTKIDHNGEIYGLNQVPSGLPLTVDYRSPVSHFVPPELYAVRQKQEPIATAEPSEPPTPVKRKRGRPRVDKTSPEYLANLAARKQAKEMAAMMNNRTPESGEKRKRGRPRVDKTSPEYLARKRARELEALERKAKREYKRRATGDSAASSSAGETTPRTKRKYTKRTPSAKKDAPPSVERVKGKRGRPRKVDQLAANNKQQQQPKIRVRNNLMPVNSEPITVDSDDEPDLGSPSQASDSLSLDENLRALRHIHEKYANIDKDDLYDTHLLAANFKKPHDSQRRGDDDEVLSVRSSEGCASVKEMETRVEKLEDSSNSDSDSSSSGSERQAAPSQSTSGSRNMRSSSSSSGTSSSSSSDSSSSSDSSDTESESGDEKPKTEEPPPVVNHTTNEDDRSFGAWSYSGPASDSGSDSDPERAADPAAPASHDEISESENESADKSFQCHICSKWYSTRVTLKIHRRVHQNRGTGGNQRSRARSSDRYECDCCSETFNRREKLWEHKAEAHRGAMTVRCEVCRKCFEDDAELAAHDRTHTADERAGRCPTCGLTFPRYEQLRRHAACAHGAAPPPGSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKHHYNNAARLGAPAARLRAVRQALQPRALPHAPHAQPRQAALPLRRVQATRTPSRATCTTTPSSSTAASCARWVSLHYSTTTITPPGSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKHHYNNAARLGAPAARLRAVRQALQPRALPHAPHAQPRQAALPLRRVQATRTPSRATCTTTPSSSTAASCARWVSLHYSTTTITPPGSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKHHYNNAARLGAPAARLRAVRQALQPRALPHAPHAQPRQAALPLRRVQATRTPSRATCTTTPSSSTAASCARWVSLHYSTTTITPPGSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKHHYNNAARLGAPAARLRAVRQALQPRALPHAPHAQPRQAALPLRRVQATRTPSRATCTTTPSSSTAASCARWVSLHYSTTTITPPGSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKHHYNNAARLGAPAARLRAVRQALQPRALPHAPHAQPRQAALPLRRVQATRTPSRATCTTTPSSSTAASCARWVSLHYSTTTITPPGSARLPHACAQCGKRFSHAHSLTRHMHNHAKQLYRCVVCKASFARADQLAQHLNSHLANYKRLKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -