Lnic009712.1
Basic Information
- Insect
- Luperina nickerlii
- Gene Symbol
- cdc5l
- Assembly
- GCA_963855955.1
- Location
- OY979668.1:7039967-7041751[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.4e-18 1.1e-14 55.5 1.8 2 46 9 54 8 54 0.97 2 3 8.9e-13 1.3e-09 39.3 0.1 1 45 60 103 60 104 0.93 3 3 0.047 67 4.9 0.0 11 31 130 152 129 158 0.81
Sequence Information
- Coding Sequence
- ATGCCGCGAATTATGATAAAAGGTGGCGTTTGGCGCAACACCGAGGATGAAATCCTCAAAGCGGCGGTGATGAAATATGGGAAAAACCAGTGGTCCCGTATTGCGTCGCTGCTGCATAGAAAATCTGCAAAACAATGCAAGGCTCGTTGGTACGAGTGGCTTGACCCGAGCATCAAGAAGACGGAATGGTCTCGCGAGGAGGACGAGAAGTTGCTGCACCTGGCCAAGCTGATGCCCACACAGTGGAGAACCATTGCGCCCATCATTGGTCGCACGGCTGCACAATGTCTGGAGAGATACGAGTATTTGCTGATGAGCAGGCCAACACACCAACAACTGGAGACTCTGATAGATTTCCTGGTACAGAACCCAGGAATTGCCAAGGGGTTATTGCGCACTGCTCATGCTAAGCAGGAGACAAAGAGAAAGTGGAACGACATAGCAGTATCCTTAAACGCACTAGGTGGTGCACAGAAAGATGGTAAAGGCTGGGCTAAGTATTGGGCTGACAAAAAGCATACCCTAAAGAAGACATGTGGCGAGCTGTAG
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLMSRPTHQQLETLIDFLVQNPGIAKGLLRTAHAKQETKRKWNDIAVSLNALGGAQKDGKGWAKYWADKKHTLKKTCGEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -