Lnic032679.1
Basic Information
- Insect
- Luperina nickerlii
- Gene Symbol
- -
- Assembly
- GCA_963855955.1
- Location
- OY979685.1:10541148-10543553[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 8.2 1.2e+04 -2.3 0.0 4 28 164 194 163 204 0.66 2 5 3.3e-10 4.7e-07 31.0 0.1 1 45 266 312 266 313 0.94 3 5 1.1e-07 0.00016 23.0 0.1 2 44 320 366 319 368 0.95 4 5 3.5e-11 5.1e-08 34.1 0.0 1 43 372 414 372 416 0.97 5 5 8.8e-06 0.013 16.9 0.0 3 45 424 468 422 469 0.91
Sequence Information
- Coding Sequence
- ATGGAAATTGACGACATCGAGTTAGACTCTGAGACAGACTCCGAAGTCTACAGTGATGAGGATTCAATATTCGAAGCTGATAACATGAGCCAATGTCATGCGCTGATAGACAATGATGACGCCTTACTCGGTGTGGGGAGGCGTAGCCAGACGATGACCCAAGGAACACATAGTGCCAATAAAAGAAGCAGTGAATCCTCAGCAGCACTGGCTCAAATAGATCTAGCTTTGTCTGCAAACAAATTATTAGACGAAAAGATGAAGAGACTGGAGAGAGATCTCGCCTCACGGCTCAATGAGTGTCGGGAGAAGCTGAAAGTGGTCCAAGGTAGTGCTACACATAATGATAAAAATGAAACTTTTCGCTACATCAATTGTGGTAGACCCTACTTTAAGGATAGCCAGAACTTTCCAGCTCCAGACAACGATGATGCAAAATTGGCAAAATCTCAGATGTATGACTTCTCCTTAGTTATTTCAGCACCTGGCTGGACAGTAAGAGACAAGTCTCAATTTGTTAACATGATGCACAAAATGTcaatagatataaaaaaaaatgagctgTTCAAGAAAATTGCTACCTTACAACGTAATAACAAATCCAAAAAAATGGAAAGAGAAATAATGGCCATTAGAAAAGAAATTGATACAGTAAGTAAATTGCCTTTATATAAAGTAGCTCTTCCGATAGATCAGGAGTATGATTGGGACATGTTAGcgaataaattaaataggaGGCACACAGCGCAAGAGTATCAATCCTTCTGGAAGTTATTCTTTCATCCTTCAATTAGCAAAAACAGTTGGAGCAAAACTGAACATGCAGCATTACAGAGAGTTGCTTGCCAAAATGGTAAACAGGATTGGGATAAAATTGCTCTCAAACTAAATACTGGCAGGACTGGGTATCAGTGTTTTGTATACTATCGGACAAATATGACCAGCTCTTTTACTGGAAAGAAATGGACTACTGAGGAGATAACATACCTTAAAAGATTGATAGAATATTTCAAAGAAGACTTTTACATTCCCTGGGGAAAGATAGCTGCAGCAATGGAAAACCGAACTAAAATCCAAATCTATAATAAGTATATGAGACTCATTGAACAAAGGAAAGGCAGGTTCCTCCCTGAAGAAGATGCAGTTATTCTTAACTGTGTGCAAAGGTTTGGAGAGAATTTTAGGAGGATGACTTCTTATTTACCTGGCCGATCTATGGTCCAGATACGTGCCAGATATCAAGTCTTGAACAGAATGCGAGTGTCAACTGTATGGACTGTTGAAGATGACAGGAAACTTATTCAATTGATGGCGAACCAAGAGCCTAACATGAACTTTTCAACAGCTGCCCAATTTTTTCCAAACATAACCAGAACAAAAGTTAGATCTAGATATATTACATTAGTTAAATGGATGAAAAAACACCCTAATTTAGATTTGGAGCATGCACCGCGACGAGGCGCGCGTCGTTTGAATCATGGTGAAGCCAGCGGAAACCTGATAGAGGCAGTagagaatttaaaaaattctttaatTACAACATGCCAAAAGAGGGCTAAGAAAAAGAAGCTTTCTGAAGAGTCTACTCACAAAGATTTAAATGATGCTATTGTTGTGTGCCTTGTGAATTGTatactaaaagaaaaagaaacagaaTCAAAGAAGAATCCagataataatttagttttaggtCCTGACCATGTTGTGTCATTGGCAGACTTAAACATTACAAACCTGcgcaaaaatataatatttttaaatgcacGTCTTGATGAGTCTGCTTATATAGACAGCACCTACGAAGAAGATTATCCATCTTTAGGAGATAGTAATCAAGATGTTTctttagttaaaataaaatcctaTTCTCGGAAGCCCTCGAACCAACCTATAAAGGTTAAAGATGCTCCTAATGTTTGGGGAACCCCTACGCTCTTTCAAGGCATACGAATGCTAAACCAGCGAAAGTATGTCTTACCTCCACAACTGGCTACCATTACCGGCGCTAGAGCCATAATGGCATGTGTGATGTCAAACGGTCCATACAGCGATTCTATAAACCTACATGTTCTCTGCAGGCGTAACATATTATTGAAGGAGCTCTTAGATCAAGTTCTTGAACGCTTCTATGTTTTATTCACATGGCCAATGATCTTATCCAATGAATTGCCTAATGAGATAACTGTATCAAAACTACCAAGAACAGACTCTGTTTTCATCCGACCACCTATATTGCCAACTGCGCCTGAAGTAACAATTAATGTTAAATGTatgaagaaatttaaaaatgtagaTGTTACAGAAATTATTGACCTGGATGAAGATGCAGCTAAGGATGTTGTGATTGCTGTCAAAGAGAAAATTGATACTGATACTGATGAGAAGATAGAAAAACTTCTTTGTTGA
- Protein Sequence
- MEIDDIELDSETDSEVYSDEDSIFEADNMSQCHALIDNDDALLGVGRRSQTMTQGTHSANKRSSESSAALAQIDLALSANKLLDEKMKRLERDLASRLNECREKLKVVQGSATHNDKNETFRYINCGRPYFKDSQNFPAPDNDDAKLAKSQMYDFSLVISAPGWTVRDKSQFVNMMHKMSIDIKKNELFKKIATLQRNNKSKKMEREIMAIRKEIDTVSKLPLYKVALPIDQEYDWDMLANKLNRRHTAQEYQSFWKLFFHPSISKNSWSKTEHAALQRVACQNGKQDWDKIALKLNTGRTGYQCFVYYRTNMTSSFTGKKWTTEEITYLKRLIEYFKEDFYIPWGKIAAAMENRTKIQIYNKYMRLIEQRKGRFLPEEDAVILNCVQRFGENFRRMTSYLPGRSMVQIRARYQVLNRMRVSTVWTVEDDRKLIQLMANQEPNMNFSTAAQFFPNITRTKVRSRYITLVKWMKKHPNLDLEHAPRRGARRLNHGEASGNLIEAVENLKNSLITTCQKRAKKKKLSEESTHKDLNDAIVVCLVNCILKEKETESKKNPDNNLVLGPDHVVSLADLNITNLRKNIIFLNARLDESAYIDSTYEEDYPSLGDSNQDVSLVKIKSYSRKPSNQPIKVKDAPNVWGTPTLFQGIRMLNQRKYVLPPQLATITGARAIMACVMSNGPYSDSINLHVLCRRNILLKELLDQVLERFYVLFTWPMILSNELPNEITVSKLPRTDSVFIRPPILPTAPEVTINVKCMKKFKNVDVTEIIDLDEDAAKDVVIAVKEKIDTDTDEKIEKLLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01246845;
- 90% Identity
- iTF_00071386;
- 80% Identity
- -