Lnic030343.1
Basic Information
- Insect
- Luperina nickerlii
- Gene Symbol
- clz9
- Assembly
- GCA_963855955.1
- Location
- OY979683.1:15142151-15144679[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-09 1.2e-06 29.3 0.1 4 43 7 45 5 46 0.94
Sequence Information
- Coding Sequence
- ATGACTGATAGGCAGAAGGCTATATTAAAGGCCATGGAGGCAGTCAGAAAAGGGGCCTCAGTTTCAGCTGCTGCCAGGCAGTTCAGTATCCCACGGTCGACGTTGGATGATAAGATACGGGGCCGCTATTCTGTTGAATGCTCCAAGGGACCGTCTACAATACTCACAAGAGATGAAGAAGAGCATTTGAAAAGGTGgattatttttatggccgatagTGGGTTTCCCATAACTAAGGCACAGTTATTGGATAGCGTCAGCTTACTAGTAAAAAAGATGAAGCGAGAAAACCCATTTCACAATGACCGACCAGGTCGGCATTGGTTTGAATCGTTTGTAAAACGACACCCCGAAGTAGGCCAACGAGTGGCTCAAAATTTGACGCAAACCCGTGCCTTAGTCAAAGAAAGTAATCTAAGGGCTTGGTTTAAAGAAGTAGAAGATTACTTTATAATGACTCATTTAGAAGAAGCAATTAGAGATCCACGTAGGATATTCAATTGTGATGAAAGCGCTTTCTTTTTATCACCGTCTGATAACAAAGTCTTAGCTAAACGGGGCGCAAAAAACGTTTACAACATTATTCCCAGCGGTGAAAAAGAGTGCGTAACCGTTTTAGTTACGGCAAACGCGGCAGGTGAATTGGCACCTCCATTGGTATTATTCAAGCTTAAGTCAATACCACATAAAATTTCGAAAACAGCACCGAAGGACTGGGGCTTGGGATTTACGCCAAAGGGTTGGATGACAGGAGAGTCCTTTTATGAGTACATGGCTAACGTGTTCTATCCCTGGGTTTCAAAAACCAATATTAAATtcccaataatatttttcttagaTGGCCATTGCTCACACACCACGCTACCACTGAGCAATTTTTGTCGGGAGAAAAACATGCAATTGATCGCACTATACCCCAATGCAACTCATCTTATCCAACCCATGGATGTGGCTGTTTTTCGCCCTCTTAAGAGTATTTGGAAGAGATCGGTTTATGACTGGCGAAATGAAAACCACTTTATAAAACTACGAAAAGAGAATTTCTGCCCGCTGCTACATAAATCTCTTATGCAGTTGGATCCCAACTCGATCAAAAATGGATTTCGCAAATGCGGGTTGTCACCTTTTGATGCAAATGGCGTAGATTATTCCAAGTGTGTAACAAGTCACCCTAAAAAACCAGCCAAACCAGATAACCAAATACAACCAGATGCCGTTAGCCATTTCAAATTCTTTGAATCACAAATAAGTCCTGAATACCTCGAAGCTTTTTACGGTACCAGAAGTCCAACTTGGAAAGGGGATAAATCCTTAGAAGGATTATTCAATGTCTGGAGGCAAATGCATATTCAAAATAATGTACCAGACATAATAAATAATGGTTCTTCAACTTTCACACAATCGTGTGCTCAAGAAACGTCGTATAATAACGAATTGCTATCCGGAGATATAGGAAACTTCACAGGCCTGACTGACGTCTTGGACATAAGTCCAAGATGTCAGTCAGATTTGTCTTTGTGTGTGAATATTAACTCAAATGAGTTCAGTGACATAGTGACTGAAAATGAAAGCCATACAGGAAAAatagaaatgtatgaaaatgttaACGGGATACTAACAAAAATCGTGGACGCAGAAATCCCAACTAATGACACTTCTgaactgacaaattttatcgaagaaAATCAATATCGTCCTCAAAATGAAACTCAAAACACACACCATTTATCTGGTCGAGTAATCCGAACAATAGCCTCGAACCCTATATACATCACTTCTTGCAAAAACACTGCACTGAAAAACATCAACCACTGGAATGACATCAACAGCTATACTGAATTAGTGCCGACACAAACACAATTTCAGTCAACTATGACACAAACGTCATTTTGTAGCAAAGAACTCGTTCCAATAACACCTCCAAGTAAAACATCACCAAAACTTCCAAAGACAATTAATGCGACATCGATAATGGCTGATGATACAAGTCCTGATTATACACAGAACAGAATTAAAACATCCGAAAATATGAAGACACCGCCACAAACACCTATCGTACAAGCGTTACCTGAAGATGACAACGGCAaccaacaaaaaactaaatattatgGAGATTTAGTTGTACCGACACCATTTAAAGACGCTTTATTTTGGCCAGGAACTCCTAGTAGCAGCACAAAAAGTAAAGTTAAATTACCCAGCATTATAACATCTGATAGATGGCAAATCTTTGCACAGAAAAAACTAGAAGCAAAGACAAAAAAAGAGGAGAATAAAGTTAaagcaaaacaaaagaaaattaaaagatCTGAGCTTGGAGTTAATAACAAGAAACCTAAGAAGAAATCAGTAGAAATCAGTATCATCACAAATGAAGATTGGTTTTGTCGGTTATGCCAAAGAAGCACGAAATTGGACATGATACAATGTGTGACTTGTAGGACCTGGTATCATACGGTTTGTGCAGAAGTTTCGCCAAACGAAGTAACGTTTACTTGTATGTATTGTAACGTGTCGTTTGATGAATAA
- Protein Sequence
- MTDRQKAILKAMEAVRKGASVSAAARQFSIPRSTLDDKIRGRYSVECSKGPSTILTRDEEEHLKRWIIFMADSGFPITKAQLLDSVSLLVKKMKRENPFHNDRPGRHWFESFVKRHPEVGQRVAQNLTQTRALVKESNLRAWFKEVEDYFIMTHLEEAIRDPRRIFNCDESAFFLSPSDNKVLAKRGAKNVYNIIPSGEKECVTVLVTANAAGELAPPLVLFKLKSIPHKISKTAPKDWGLGFTPKGWMTGESFYEYMANVFYPWVSKTNIKFPIIFFLDGHCSHTTLPLSNFCREKNMQLIALYPNATHLIQPMDVAVFRPLKSIWKRSVYDWRNENHFIKLRKENFCPLLHKSLMQLDPNSIKNGFRKCGLSPFDANGVDYSKCVTSHPKKPAKPDNQIQPDAVSHFKFFESQISPEYLEAFYGTRSPTWKGDKSLEGLFNVWRQMHIQNNVPDIINNGSSTFTQSCAQETSYNNELLSGDIGNFTGLTDVLDISPRCQSDLSLCVNINSNEFSDIVTENESHTGKIEMYENVNGILTKIVDAEIPTNDTSELTNFIEENQYRPQNETQNTHHLSGRVIRTIASNPIYITSCKNTALKNINHWNDINSYTELVPTQTQFQSTMTQTSFCSKELVPITPPSKTSPKLPKTINATSIMADDTSPDYTQNRIKTSENMKTPPQTPIVQALPEDDNGNQQKTKYYGDLVVPTPFKDALFWPGTPSSSTKSKVKLPSIITSDRWQIFAQKKLEAKTKKEENKVKAKQKKIKRSELGVNNKKPKKKSVEISIITNEDWFCRLCQRSTKLDMIQCVTCRTWYHTVCAEVSPNEVTFTCMYCNVSFDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01064591;
- 90% Identity
- iTF_00147313; iTF_00147290;
- 80% Identity
- -