Lnic017707.1
Basic Information
- Insect
- Luperina nickerlii
- Gene Symbol
- kn
- Assembly
- GCA_963855955.1
- Location
- OY979673.1:15047884-15073139[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.8e-53 3.4e-49 168.9 0.0 11 135 135 249 126 254 0.92
Sequence Information
- Coding Sequence
- ATGACTATACGTGAATCACTGTCACACGCCTATCACCGAGGTGAAGAGCTTGCAGCAGCGTCTCACGTACAGACGATCGAGTCTGCTCGCCACACAGCGCAGGATAAGGTTGGGGCTGGCCCGCACGCGGTGCACCAGGGAAGCGCATCGTTTTCTCATCGTTGTATAAAAGCAGTCGACTCGAGAACTAAAagaaccaccgattggATTCGGTCGGACGAGTTGAACGCGGCGGGCGGGTACACGGGTTCACCGTGGCCGCCGCTGGAACTAGACCCCGTGGGATGGGGGCGAAAGCTGTACCCTTCGGGAGCCCCAAGATCTTCAGGCGGGCTGATGTTCGGCCTGCATCACCAGGAGGCGGCGGGGGGCATCCACGCTCAGCCCCGTGGACCCGTCACCTCTTTAAAGGAGGAACCCCTCACCCGAGCATGGATGACACCGACCTCACTAGTTGATAATACCAACAGCGTAGGCGTGGGTCGTGCGCACTTCGAGAAGCAACCGCCCAGCAACCTGCGCAAGAGCAATTTCTTTCACTTCGTAGTCGCGCTCTATGACCGAGCGGGACAACCAGTCGAGATCGAACGTACCGCCTTCATTGGATTCATTGAGAAAGATCAGGAAGTTGAAGGGCAGAAGACGAACAATGGCATCCAGTACAGACTTCAATTACTTTATGCAAATGGTATTCGACAAGAGCAAGACATATTCGTTCGACTTATCGATTCGGTGACGAAACAGGTAAGATATTCAATTGTTTCTCTCTAG
- Protein Sequence
- MTIRESLSHAYHRGEELAAASHVQTIESARHTAQDKVGAGPHAVHQGSASFSHRCIKAVDSRTKRTTDWIRSDELNAAGGYTGSPWPPLELDPVGWGRKLYPSGAPRSSGGLMFGLHHQEAAGGIHAQPRGPVTSLKEEPLTRAWMTPTSLVDNTNSVGVGRAHFEKQPPSNLRKSNFFHFVVALYDRAGQPVEIERTAFIGFIEKDQEVEGQKTNNGIQYRLQLLYANGIRQEQDIFVRLIDSVTKQVRYSIVSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00120277;
- 80% Identity
- -