Lnic017708.1
Basic Information
- Insect
- Luperina nickerlii
- Gene Symbol
- kn
- Assembly
- GCA_963855955.1
- Location
- OY979673.1:15110466-15121505[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-142 9e-139 464.7 0.0 182 387 12 235 8 239 0.99 2 2 1.2e-07 0.00083 19.0 4.8 420 469 244 295 236 415 0.74
Sequence Information
- Coding Sequence
- ATGTtcacagtgttaaaattgtgGTTTTGTTGCAGGTTTTTCTTGAAGTTCTTCCTGAAATGCAACCAGAATTGTTTGAAGAATGCTGGGAACCCTAGAGATATGAGAAGGTTTCAgGTGGTAATATCAACTCAAGTGATGGTCGACGGTCCTCTCCTAGCGATATCAGACAATATGTTTGTCCACAACAACAGCAAGCATGGCCGGAGGGCAAAGCGGCTAGACCCTAGCGAAGGTACAGATGGTGCGACAGACAATACTTCAGGTTTATATCCTCCCCTGCCAGTAGCCACACCATGCATCAAGGCGATATCACCGAGCGAAGGCTGGACGTCGGGAGGGTCGACAGTGATCATAGTAGGGGACAATTTCTTCGACGGACTACAAGTTGTGTTTGGAACCATGTTGGTTTGGAGTGAGTTAATAACATCGCACGCGATAAGAGTGCAGACCCCACCGCGACACATACCGGGCGTCGTGGAGGTGACGCTTTCGTATAAGAGTAAGCAGTTTTGTAAGGGAGCGCCAGGGAGATTTGTTTATGTTTCAGCGTTGAACGAACCAACGATAGATTACGGCTTTCAGAGGCTACAGAAACTTATACCAAGACATCCCGGGGACCCGGAAAAATTACCTAAGGAAATAATCCTAAAACGAGCGGCGGACTTAGCGGAAGCACTATACTCAATGCCTCGCAACAACCAACTAGGGCTGGGCGCGCCGAGATCACCTCCTGCCAGCATGCCTTTCAACTCGTACACAGGACAACTAGCCGTAAGCGTGCAGGATACTGCGGCCTCGCAGTGGACTGAAGAGGAGTACGCGCGCAGTGGCGGCTCGGTATCGCCGCGGTATTGTTCTGCCGCGTCCACCCCGcacgccgcgcccgccgccTACCCGCATCCACAACACTATCCCGCTCCGCCGACCTCACTCTTCAATACCACGTCTCTGTCTCTAGGACCATACCATCCGGCGAACATGAATGGACACTTATCATCTGACCGTCACTATAACTCGTATAACACGAAAGATAGCGGACATTACAGTGAAAGAAATGGGAATTCTAAAAGCCTGGCCGACTGTCCGGTAAACATTCATACAAAATGCTCCGGCAGTGATATGAATGGGGCTCAGAATAAAGAGACTAAGCTGAGAAGCGCTTTTGCCGTTGTGAGGCAGAGAATGGGCGGCCTAGTATCATCGCCGTTCAGTGTCAACCCGTTCTCACTACCAACTTGCAGCGCTCAACAGTATGCTCAGACAGCCCCGCTTGCTTCCAAGTAG
- Protein Sequence
- MFTVLKLWFCCRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPSEGTDGATDNTSGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGAPRSPPASMPFNSYTGQLAVSVQDTAASQWTEEEYARSGGSVSPRYCSAASTPHAAPAAYPHPQHYPAPPTSLFNTTSLSLGPYHPANMNGHLSSDRHYNSYNTKDSGHYSERNGNSKSLADCPVNIHTKCSGSDMNGAQNKETKLRSAFAVVRQRMGGLVSSPFSVNPFSLPTCSAQQYAQTAPLASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00036409;
- 90% Identity
- iTF_00176893;
- 80% Identity
- -