Lnic029969.2
Basic Information
- Insect
- Luperina nickerlii
- Gene Symbol
- osa
- Assembly
- GCA_963855955.1
- Location
- OY979683.1:7276841-7303405[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-26 3e-22 80.0 0.0 2 89 336 420 335 420 0.94
Sequence Information
- Coding Sequence
- ATGAAGAACGCGCCTGGTGCGCCGAGCGAGCGAGCTGGAGCGCTGGGCAAAAACATCGCCGCAGTTATCGCGCTCCCCGCCGCCCCGCGCCCCGCCCCACCGGCCGGACTCGATCTGACCGGTCAGAACAGCAATGACTCGGGCGGTAGCGGCGGTGCTGGGCGCGCTACCACGCCGCACCTGAGGCCGACGCCCAGCCCGACAGGCTCCACTGGCTCACGCTCCATGTCACCGGCTGTTGGCACGCAGAACGTAGCGATGCCGCCGCGAACGTCGTCATCGCTGTCGGACGGCAGCGGGCCGACGGCGCGGCCGGGGCCCGGAGCGGCGGGCGCGCCTTCGCCCGGCGGCCCGCCCCCCGGCGCGCTGGTGGCGCAGCCCTACGCGCACCACCCCGGATACAAGCCGCCGCACTACCCGCCGCCGCAGCCCTACGGCTACCCGCCGAGAAATCACCATCCTTACCCGTACGGGTACCGCCCGCCTCCGCCGTCGCATCCGCCACAACACTACCCTCCTTTGAAGCAGCAACCACGGCACATGGGCCCCCCAGGCCCGGGCGGGCCGGGCGGGCCGGGCACCCCGGGCCCCGAGGGCGCCATGCCGCCGCCCACGGCGCCGGCCGAGCCGCACGACAACGGGCCGGCCGCGCCCGCCACCGCGCTCGTCACCACGGGACCGGATGGCGCTCCGCTAGATGAAGGCAGCCAGCAGAGCACGCTTAGTAATGCATCCGCAGCATCAGGCGAAGAAGTATGCGGCGGCGGGTCGGGCTCCAGTAAGGGCGGCTCGCGCAAAGAATATGGCCCCGGCAGCGCGGCGCCCTCGCCCTCGCCCGGCGGCGGCTCGCACTCATCGCTGCACGACGACTACGACGCCTCGCCCTCGTCGTGGCCGCGCCCGCCCTCTAGTCCCGTATTTAACAGTCACATTGCGCCGGAGTCCTACAGATCAAAGAAGTCGGACTCGCTGGGCAAGCTGTACGAGATGGACGACGCGCCCGAGCGGCGCGGCTGGGTGGAGCGCCTGCTGGCCTTCATGGACGAGCGCCGCACGCCCATCGCCGCCTGCCCCACCATCTCCAAGCAGCCGCTCGACCTCTACCGCCTGTACCTGCTCGTGCGCGACCGCGGCGGCTTCGTGGAGGTGACGAAGAATAAGACGTGGAAGGACATTGCGGGGTTGCTGGGTATCGGCGCGTCGTCGTCCGCGGCGTACACGCTTCGCAAGCACTACACGAAGAACTTGCTTGCGTATGAGTGCCACTTCGACCGCGGTGGCATTGACCCACAACCCATCATCAACCAAGTTGAAGCATCCACCAAGAAAAAGAGCGGCAAATCTAATAGCACGTCCAGTACAGGGTCGTCCAATTCGCAAGAGTCATTccccgcgggcgcgggcgcgggcgcgggcggcgcggccatGGATGGCTACGCCGCGCAGTACGCCGGCTACCCGCCGCAACCCAACCACTCGCAAGGCGGCGGGCCGGGCGGCGACAACCTTGCCGCCTCCAACCCGTTCGACGAGCCGCCGGGGCCCAGGAGACCCCCAGGTTACCAACAAGGTTACGGGTACGAATACGGATCTCCTTACCAGCCGAATAGGCCTGTTTATCCTCCTTATGGTCCCGATGGTGACAGGTAA
- Protein Sequence
- MKNAPGAPSERAGALGKNIAAVIALPAAPRPAPPAGLDLTGQNSNDSGGSGGAGRATTPHLRPTPSPTGSTGSRSMSPAVGTQNVAMPPRTSSSLSDGSGPTARPGPGAAGAPSPGGPPPGALVAQPYAHHPGYKPPHYPPPQPYGYPPRNHHPYPYGYRPPPPSHPPQHYPPLKQQPRHMGPPGPGGPGGPGTPGPEGAMPPPTAPAEPHDNGPAAPATALVTTGPDGAPLDEGSQQSTLSNASAASGEEVCGGGSGSSKGGSRKEYGPGSAAPSPSPGGGSHSSLHDDYDASPSSWPRPPSSPVFNSHIAPESYRSKKSDSLGKLYEMDDAPERRGWVERLLAFMDERRTPIAACPTISKQPLDLYRLYLLVRDRGGFVEVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAYECHFDRGGIDPQPIINQVEASTKKKSGKSNSTSSTGSSNSQESFPAGAGAGAGGAAMDGYAAQYAGYPPQPNHSQGGGPGGDNLAASNPFDEPPGPRRPPGYQQGYGYEYGSPYQPNRPVYPPYGPDGDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00037556; iTF_00300948; iTF_01221273; iTF_00685210; iTF_00172507; iTF_00017123; iTF_00147080;
- 90% Identity
- iTF_01221273;
- 80% Identity
- -