Lfer023199.1
Basic Information
- Insect
- Luffia ferchaultella
- Gene Symbol
- nfxl1
- Assembly
- GCA_949709985.1
- Location
- OX453261.1:10575448-10577928[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 2 3.2e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 20 0.14 2.3e+03 -0.5 0.8 4 10 169 175 168 175 0.95 3 20 2.7e-07 0.0044 17.8 16.1 3 19 186 202 185 202 0.95 4 20 2.3e-08 0.00037 21.3 12.2 1 19 237 255 237 255 0.93 5 20 0.66 1.1e+04 -2.6 0.8 6 10 280 284 279 284 0.91 6 20 9.9e-10 1.6e-05 25.6 12.0 1 19 290 308 290 308 0.98 7 20 8.5e-07 0.014 16.2 19.9 3 19 345 361 337 361 0.83 8 20 1.4 2.3e+04 -3.6 0.3 1 4 370 373 370 374 0.86 9 20 1.9 3.1e+04 -4.0 0.9 5 10 384 389 384 389 0.89 10 20 0.00052 8.3 7.4 16.5 1 18 395 412 395 413 0.91 11 20 2.2e-10 3.6e-06 27.7 10.7 1 19 422 440 422 440 0.98 12 20 0.0015 25 5.8 8.6 9 18 488 497 479 498 0.89 13 20 0.2 3.2e+03 -0.9 6.9 3 12 509 518 508 518 0.88 14 20 0.32 5.2e+03 -1.6 2.7 14 18 547 551 547 552 0.88 15 20 0.29 4.6e+03 -1.4 0.2 7 11 567 571 567 572 0.85 16 20 7.9e-05 1.3 10.0 2.9 1 11 588 598 588 599 0.97 17 20 2 3.2e+04 -4.1 1.7 15 18 613 616 613 617 0.86 18 20 1.7e-05 0.27 12.1 15.5 1 18 628 645 628 646 0.90 19 20 2 3.2e+04 -6.5 3.4 9 13 652 656 652 656 0.71 20 20 1.5e-07 0.0024 18.7 9.9 1 16 687 701 687 707 0.87
Sequence Information
- Coding Sequence
- ATGGCTAGAATGTACAGGGATGCGGTTGCAAAGCACCAAAAGTCGGTTCAGAAATATTTGCAAGAGATGAAGGAGGTGCCTTCTTCTGACGAAGAAGAACCTGTGGAGGTGAGCGTGCTGGAAGATATTCTTCGAAACTATCGAGGTGGCGGAGGCGATACTGCCATGCTTGCGCGAACTAAGCATTTACTTGAAGATTTAGTCAGTGGTCGCTCGCCCACCTGTCTCATATGCATCGCTTCTATTAAACGAGCTGATCCCATATGGAATTGTGCGCATTGCTATGCCTGTTTCCATCTTCCTTGTATACAGAAATGGTCTAATGACAGTATCAATTTAAGGTCAGTAGAGAATCATGGGCCTATTTCTGTTGTAGTGCCGAAAAAAATTGAATGGTGCTGCCCGAAATGCAGATATTCTTATACCAAAGAAGAAATCCCTAGGAAGTATAGATGTTTCTGTGGGAAATTGGATGATCCACCGTTACATCCCTGGTTGATACCACATTCGTGTGGTGAGACTTGTGAAAAACGATTATCTCTCGAAGATAACTGTCAACATAAGTGCCTTCTGTTATGTCATCCTGGACCTTGTCCACCATGCCCTCAGACAGTGACTGGCGTATGTTATTGTGGCCATGACAAAAAGAAGGTACGATGTAGTGTTGCCAAATGGTCATGTGGCCAGCAATGCAACAAAGTTTTGTCATGCAATTCTCATAGATGCGAAGAAGTTTGTCACAATGGAATTTGCCCACCTTGTAGCTACACTAGTGTACAACTTTGTGCTTGTGGAATGGAGAAAATGCAAAGACCTTGTAATAATGCTATATGGCACTGTGAGAGAACTTGTAACAAGTCATATTCATGCGGATATCATAAATGTGAGAAAGTGTGCCATAGTGGTGATTGTGGACTATGTCCTAACTCTGGCTTACGTTCCTGTCCATGTGGAGCAAACCAGAAATATGTGGAATGTCCTGATGGCATAGAAACCTGTTTAGGAACATGTGGTAAGAAACATTCAGATTGTAATCATAGCTGTCCAGAGAAATGCCACAAGGGTCCATGTCCTCCTTGCCAAAtactaatagaaaaaaaatgtctctgtGGTGCTCACTCAAAATCTCTTCCATGCAGTAGAGAATTCAAGTGTGACTCAAAATGCAGGGGCATACGATCTTGCAGGAAACACGCTTGTGGACGCCGATGCTGCAGTGGTCAGTGCCCGCCTTGtgaaaaaatttgtgacaaaCCATTACAATGTGGGAACCATAAATGCTCCATGGTCTGTCATTTAGGACCTTGCTACCCTTGTTCAAGAGAATCAAAAGTCTCTTGTCGATGCAAAGAAACAGCTATATTTGTGCCCTGTGGACGAGAAAAACATACAAAACCACCAAAGTGCACTTTATCGtgcaaaataaagtataaatgtGGTCATAACACTGAAAACAAGCATTCATGTCACTTCGGGGATTGTCCACCTTGTGTGGCAATTTGTAATAAATCTTATGAAAATTGTGAGCATTTATGCCAAGCTCGTTGTCATGAAGCAGTGGCTGTAGTTTTCAAACAAGCTGTAAAACCAGCGACACCATGGGAATTCCAACCAccgaaaacgaaaataatgtctTTGGAATGTCCACCTTGTGTGAGCCCTGTTGCTATTGAATGCTTTGGGAAACATGAAGTAGTTGAACAACCATGTCATATGGCAAAACGCAGATCATGTGGTCGTTTATGTGGTCAACCTCTGAGTTGTGGTAACCACTTATGCGCAATGTTATGCCATCTCACAAGATTTGACCCTGAATACCCTGAGATCCCGTCTATCTGTGAACCTTGTGACCAGGAGTGCTTGGTACCACGTCCAAGCAAGTGCTCTCATAAATGCTCTTTGCGTACCTGCCACCCTGGGCCTTGTCCACCTTGTGAAGTACTTGATAGGCTGCCATGTCATTGTGGAGTTACTGAGCTGTACATCAGATGTAGAGAGCTTCTTGTTTCAACAGAAGAGATCTTGTCATGCAAGCAACAATGTTCTAAAAATTTAGAATGTGGGCATAGGTGCAAAAATATTTGCCACTCTGGGCCATGTGCTGTAAACCAAGTCTGCACTAAAAAGAGTAAATGCTATTGCCCGTgtggtaatataaaaaaagacattCCATGTAATTTAGCTAGAAATGGTGAAGCATCTGTTAGATGTGATGACACATGTGAAACCAAGAAGAAGATGGTGCAGTTGGAGAAAGAAAGTGAAGAGCAAAAGCGTCGTGAGCAAGAGATGGAAAAAAATCGTCGAGAGTTGGAAGAGTATGAGTGGAAGTTGGGTAAAAAGAAGAAGTACAAGGAGAAGAAAGTAAAAGTTACCAATAATAATCAAAGCTGGTTTCAGAAACTGTGGATGTTAATTTTACCTGTTATCATTTTCATAGCAGCCAGtgtttactatattttatacatagatATTAACTAA
- Protein Sequence
- MARMYRDAVAKHQKSVQKYLQEMKEVPSSDEEEPVEVSVLEDILRNYRGGGGDTAMLARTKHLLEDLVSGRSPTCLICIASIKRADPIWNCAHCYACFHLPCIQKWSNDSINLRSVENHGPISVVVPKKIEWCCPKCRYSYTKEEIPRKYRCFCGKLDDPPLHPWLIPHSCGETCEKRLSLEDNCQHKCLLLCHPGPCPPCPQTVTGVCYCGHDKKKVRCSVAKWSCGQQCNKVLSCNSHRCEEVCHNGICPPCSYTSVQLCACGMEKMQRPCNNAIWHCERTCNKSYSCGYHKCEKVCHSGDCGLCPNSGLRSCPCGANQKYVECPDGIETCLGTCGKKHSDCNHSCPEKCHKGPCPPCQILIEKKCLCGAHSKSLPCSREFKCDSKCRGIRSCRKHACGRRCCSGQCPPCEKICDKPLQCGNHKCSMVCHLGPCYPCSRESKVSCRCKETAIFVPCGREKHTKPPKCTLSCKIKYKCGHNTENKHSCHFGDCPPCVAICNKSYENCEHLCQARCHEAVAVVFKQAVKPATPWEFQPPKTKIMSLECPPCVSPVAIECFGKHEVVEQPCHMAKRRSCGRLCGQPLSCGNHLCAMLCHLTRFDPEYPEIPSICEPCDQECLVPRPSKCSHKCSLRTCHPGPCPPCEVLDRLPCHCGVTELYIRCRELLVSTEEILSCKQQCSKNLECGHRCKNICHSGPCAVNQVCTKKSKCYCPCGNIKKDIPCNLARNGEASVRCDDTCETKKKMVQLEKESEEQKRREQEMEKNRRELEEYEWKLGKKKKYKEKKVKVTNNNQSWFQKLWMLILPVIIFIAASVYYILYIDIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -