Basic Information

Insect: Luffia ferchaultella
Gene Symbol: -
Assembly: GCA_949709985.1
Location: OX453265.1:4717478-4736058[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0057 0.49 11.8 1.3 1 23 266 288 266 288 0.98

2 9 0.022 1.9 9.9 1.5 2 23 314 335 313 335 0.97

3 9 0.018 1.5 10.2 4.8 1 23 356 378 356 378 0.97

4 9 6.9e-05 0.006 17.8 0.1 1 23 382 405 382 405 0.96

5 9 0.023 2 9.9 1.1 2 23 409 431 408 431 0.96

6 9 0.00076 0.066 14.5 0.0 2 23 438 460 437 460 0.96

7 9 9.9e-06 0.00086 20.4 1.4 2 23 468 490 467 490 0.96

8 9 0.0012 0.1 13.9 5.8 1 23 496 518 496 518 0.96

9 9 0.00011 0.0093 17.2 2.3 2 23 525 547 524 547 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0057	0.49	11.8	1.3	1	23	266	288	266	288	0.98
2	9	0.022	1.9	9.9	1.5	2	23	314	335	313	335	0.97
3	9	0.018	1.5	10.2	4.8	1	23	356	378	356	378	0.97
4	9	6.9e-05	0.006	17.8	0.1	1	23	382	405	382	405	0.96
5	9	0.023	2	9.9	1.1	2	23	409	431	408	431	0.96
6	9	0.00076	0.066	14.5	0.0	2	23	438	460	437	460	0.96
7	9	9.9e-06	0.00086	20.4	1.4	2	23	468	490	467	490	0.96
8	9	0.0012	0.1	13.9	5.8	1	23	496	518	496	518	0.96
9	9	0.00011	0.0093	17.2	2.3	2	23	525	547	524	547	0.96

Sequence Information

Coding Sequence: ATGGAAAAAACAGATTTAAAATTATCGACCGAATGGCAACAGCCAATAAACATATGCAGATGTTGTCTAACAGAGGGATGTTATAAAGATATTTCTACGGAATACTTTTCGAGTGGTCAGAAGGAAGTCTACGCCGAAATGTTGTTAGAAACGTTTAATGTTATTatatcatACCAAGAAGGCGGAGGCCCAAGTTCTTGTAGTCGTTTGATCTGCGACGAGTGCATAATTCGTCTCCGAAATGCTCATGGTTTTAAAAAGTTAGTGCTGCACAGTgaagaaatgttcaaagaacGATTGGAGAAACTGAGAGGAGGCCATGTAAAAATAGATGAAGTCAAGGAGGAAGAAATCAAAGGGGAGGGGATGGACCAATGTTCTGATGAATTCAACATAGGCAGCCCCGATGATGATATGTCTTTTGATGATGTAACTTTAGCCGCCATAAAAATTGAACAATTGAAAGAGGAACCTGCGGAAGACTGCCAAGTCGGGGTTGAAACCCCTGTCATGACCAGACGTTCTGCCAGAAAGCGATCGCAGGCCGAACGAAAGGCGGAGAAACCAGcgaaaaaactgaaaactaccaAAAGGAGCAACCAGAAGAACAAAAGAAATGATAAGCCATCGTGCAGCGAAACAACCAAAGGGCAAAGAAATTACGCAGCCCAAAAGAAAGACCTTAAAAGAAAGAACGATCACGTCGACCCTGTGATGATGAAACGGAAAAGCGAAAATACcctaaaattgataaaatactCCAACCTAACCCTGTTCAATCGGACAAAATCGAAATACAAGTGTTTTTATTGCGGCGAATGTTACATGGGCATAGTGGAATTGAAAGAGCATTCGATGACGCACACTCAGAAAGAAATCGACAAGAAAATATTAAGGATCCGCCAACCTACTATGAAGAATGCAGACATATCTGACTTAAAATGTAGGCTGTGTACAGAAAACTGTACGGATCTAAAGGCATTCATAGAACACCTTCGCGTTCACGAGATAAGAATTTCCAGGTCGGACCATCTGTTGATGCCGTTTCGACTGCAATCCGGGAGCTTCGTATGCGAGATCTGTCAGAAGAGATGCGACTTTTTTAAAACCCTAACTGTTCACATGCATGAACATTATAAGAACTATATATGTGAATCGTGTGGCACCGCTTTCGCGAATAAACCGAATCTGGcctatcatattaaaaacaaccaTAACAAGACGAAGTGTTCGCAGTGCAGCGAAGAGTTCCGAAGTCTCGCCGAGAAGATCAGACACAGGTTGAGATATCACGAAGCGAAGAGGAACTGGTATTGTCCGATATGCGATGAAACTTTGTCAAATGCGTACGCGAAAAGGTCTCACATGAACGTCGCTCACGGCGTGAAACTACCAGAACTGAAATGTACGTATTGCGATAGGGTGTTTGGAAATAGATCTTTTCTGAACTCTCATGTGAGGAGACAGCACGTGAAGGAGAAGAAGCATGCGTGTGACAGGTGCACCATGAGGTTTTGCACCACATCGGACCTGAAAAGGCACGGGAGGACGCATGAGAACACAAAAATAATGACGTGCTCGTATTGTGACAGTATGTTCAAGAGCAAAGATTCTTGGAGAAGACATTTGAAGAGGACTCACAGTCAGACCACAGCGTAA
Protein Sequence: MEKTDLKLSTEWQQPINICRCCLTEGCYKDISTEYFSSGQKEVYAEMLLETFNVIISYQEGGGPSSCSRLICDECIIRLRNAHGFKKLVLHSEEMFKERLEKLRGGHVKIDEVKEEEIKGEGMDQCSDEFNIGSPDDDMSFDDVTLAAIKIEQLKEEPAEDCQVGVETPVMTRRSARKRSQAERKAEKPAKKLKTTKRSNQKNKRNDKPSCSETTKGQRNYAAQKKDLKRKNDHVDPVMMKRKSENTLKLIKYSNLTLFNRTKSKYKCFYCGECYMGIVELKEHSMTHTQKEIDKKILRIRQPTMKNADISDLKCRLCTENCTDLKAFIEHLRVHEIRISRSDHLLMPFRLQSGSFVCEICQKRCDFFKTLTVHMHEHYKNYICESCGTAFANKPNLAYHIKNNHNKTKCSQCSEEFRSLAEKIRHRLRYHEAKRNWYCPICDETLSNAYAKRSHMNVAHGVKLPELKCTYCDRVFGNRSFLNSHVRRQHVKEKKHACDRCTMRFCTTSDLKRHGRTHENTKIMTCSYCDSMFKSKDSWRRHLKRTHSQTTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -