Lfer028337.1
Basic Information
- Insect
- Luffia ferchaultella
- Gene Symbol
- ZFY
- Assembly
- GCA_949709985.1
- Location
- OX453268.1:6512624-6534105[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.12 11 7.6 0.5 1 23 1017 1040 1017 1040 0.94 2 11 0.0073 0.63 11.4 0.1 1 23 1047 1069 1047 1069 0.98 3 11 0.035 3.1 9.3 0.5 1 23 1073 1096 1073 1096 0.95 4 11 2.7 2.3e+02 3.4 0.6 1 11 1104 1114 1104 1126 0.72 5 11 2.6e-05 0.0023 19.1 1.1 3 23 1132 1153 1131 1153 0.97 6 11 0.00041 0.036 15.3 2.5 1 23 1159 1181 1159 1181 0.97 7 11 0.058 5 8.6 0.6 3 21 1194 1212 1193 1217 0.90 8 11 0.00024 0.021 16.1 0.6 1 23 1225 1248 1225 1248 0.93 9 11 0.00096 0.083 14.2 3.3 1 23 1253 1276 1253 1276 0.98 10 11 1.1e-06 9.9e-05 23.4 0.8 3 23 1285 1305 1284 1305 0.98 11 11 2.9e-05 0.0025 19.0 1.4 1 23 1311 1334 1311 1334 0.95
Sequence Information
- Coding Sequence
- ATGACAGGAAGAGGAAGAGAGCTAGCGGACGTTTTAGAAAGAAGAGGGATAAACGTGGCATGTTTGCAGGAGACGAAGTGGAAGGGAGCAAGGGCAAGAGAAATCGGGGTgggatttaaatttttctactgTGGAAGTGATGGCAGGAGGAATGGGGTAGGAATTGTATTAGATAATGAGTTGAAAAAATGTGTGACGGATGTTAGGAGAGTGAATGATAGACTCATAGTAGTGAAGTTGTTGTTTGAGGGAGTAGCGTTAAATGTAATTAGTGTGTATGCACCGCAGACGGGATGTAGCGAGGTAGTGAAAGAGACGTTTTGGAAGGGTTTTGATGCGGTGATGATGGAGATCCCGGAAGGCGAGGAGGTTTACATAGGAGGcgattttaatggacatgtggGGAGAATGAAAGGAGGGTATGAGAGAGTACATGGTGGGTGGGGCTATGGAGACAGGAATGAGGGGGGTGAAACCCTTTTACAAGCTGCAACCGCATTCGATCTGGCTatagtaaatacatttttcCAAAAAAGAGACCAGCATCTAATAACCTATAATAGTGGTAATCATAGAACCCAAATAGACTACTTCCTTATTAGGAGAAATAACATAAGGGCAGcgaaaaactgtaaaatcaTACCCGGCGAGGCCTTGGTTTCACAACACCGGCTTTTGTTATTAgatctaaaatttaaagttcAATCAAACAGAAACAAGCCAAGTCCTCCACTTAAAACTAAATGGTGGGTGCTGGAGAAAGAAGAATATGCAGAGGAGTTTAGAAGGAGAGTGGTAAATAAAATGATGGAAATGAAAGACATGGAAGGGAAATCAGTGAATGAATGTTGGAACGAAATGGCAGCATGTATGAGAAAGGCGGCGAAAGATGTTTTTGGGGAAACCAAAGGAAAAAGAAAGATAGATAGAGAGACCTGGTGGTGGGATAAAGAGGTCcaaaacattataaaagaaaagaagatagcgTTTAAGGAATGGAAGAGTGTTGATGATGAGGACTCGGTACTTAAGGAACAGATGAAAGCAAAGTATGTGGAATGtaagaaaaattctaaaaaagcaGTCGCGGCAGCTAGAGCTAAAGTACGAGACAAATTGTACAACTCACTAGAAAGTGCACAGGGACAAAATAACTTGTACCGACTGGCAAGAGCGAGAGAAAAGAGTGCAAGGGATATAGCACATGTTAAATGTATAAAAGATGAAGCAGGAAAGGTACTGACAAATGATGACGAAATAAAGAAGCGGTGGCAAGGATATTTTAAGAGATTGTTGAATGAGGAAAATGATTGGAGTGGAGAGTTGGCAGATGTACCAACGAGTCTAGGTGTGGTGCCAGAGGTGAGTATGGATGAGGTGAAAGAAGCAGTACAAGACATGAAGAATGGAAAAGCCGTTGGGCCGGATGGTATACCAGCGGAAGTATGGAAGTTTTTAAAAGTGGATGGATGGATGTGGCTAACTTTGTTCTGCAATAAGTTGCTGCGAGAAGAGGTGATACCTGATGAATGGTGCAACAGTTCACTGGTGCCCATCTATAAAAACAAAGGTGATGTACAGGATTGCAGCAGCTATCGGGGAATAAAGCTTATGTCACATAGCATGAAGATTTGGGAAAAGGTGATAGCGAGAAGAATGAGAAAGGAGAGTGAGGTGACACAGAACCAGTTCGGGTTTATGCCGGGACGAGGAACAACGGACGCCATATTCGCATTACGTCAACTGTGTGAAAAATACAGACGTACGCACAAGAACTTGCACATGGTGTTCATTGACCTGGAGAAGGCGTATGATCGCGTACCCCGAGAGGTTCTGTGGTGGGCGTTAAAGGAGAAAAGAGTGCCAGAGAAATACATTCGGTTGGTGCGATCGATGTATGGAAGAGCCAGTACTCACGTACGGTGCGAGTCGGGGGTAACGGACAAGTTCAGTGTGGCGGTGGGCCTACACCAGGGATCGGCTTTAAGCCCTTACCTGTTCCTTCTGATAATGGATGCCTTAACATCAGACATACAGGAGGAGGCACCCTGGTGTATGTTgtttgctgacgacattgtTCTTGTCGGAGAAAATGCTTCCGAGATCCAGGGCAGACTGGAGAAATGGCGGGAGAGACTGGAAAATGTAGGATTTAGAATAAGCAGAGCAAAGACCGAACACTTGTTCTGCGACTTCGGTGGTGCATCCAGTTTTTCGCACATAGCCTTAAATGGTGTATCCCTTCCAGTCTGCTCCGACTTCAGGTATCTCGGatcattaatacaaaatgacGGCGACATTGACCGGGACGTGAAGAACAGGATAAATGCGGGATGGATAAAATGGAGACAGGTCTCATCAACCACATGTGTTCCGCGAATGCCCCTTAGGTTGAAAGGGAAGATCTATAAGACGATCATAAGACCTGTCGTGCTGTATGGTTCAGAGTGTTGGGCAACAAAGGAGACGGATGAAAGAAGAGTGCATGTGGCAGAGatgagaatgttaagatggatgtgtggtAATCTCAGCGAGTACTTACTAACAGACGCGAGCCGCCCGCCGAGATTAAAAATCCACAAATTACCAAACTTGGATATTGTACCCACGATAGAAATTGAAGTGACATCTTGGACCGTAGATAAAAATAGAGAACCCGAGACCAGGGATGCATCTCCAAAAAGAGAGGTGCATATCAAAAAGGAAGAATTTGATGACGTTGATAATTCTTCAAAAGaCGTCAAACATGAAAATGGTAGCTACGATTCAGATTGCCAATACCAGTCGGATGCTAACAGTGGTTCGCgagaaattgaaaaagaaatgaaattagCGAGAGCagcaaagaaaaagaaaaaaattaaaaacaaaaagaataacGTCAGAAAAGCCGAGAAATTAATAAAGAAGATACAAAATGAAAGGAAAGAGACACAGAACAGATCGAGAACCACAGAGCAAAAGATTTCAACTGTAGAGTTGTCATATGAAGAGATGCTGGAGGAGCGAGACAAAGCTGTGAAACGAGAACAATACGTATGCGCGGAATATAAGTGTGAAAAATGCATCTTGGCTTTCACTATGCAGAAATCTTATATGGACCACATGGCCGCCAAACACTCGCCGGATTTGGGCGACTACAGCTGTCCGATCTGCCAGACTGTCATCGCTTCGGTTGAATCGTTCACTGCACATTACAAGAGACATTTGAGAAGatacgAATGCGGTACTTGCGGCAAAAGGACGATGGACAGAAAGGCGATGGCACAACATTATACATCCACACATACAGCCGGAGATACTAAACAGTACACATGCAACCTCTGTGGGAAAATATCAATGTCGATAGACGCACATCGGTACCATCGCGGGACGCATCGCGCGCGCGTAGCTTGCACAGAATGTGACAAAACTTTCAGCCATCGCGCAGGCCTCATGAATCATCGCCTAACCGTTCACAAGCTAAACAACATGTTCCCTTGCCACGTCTGCGAAAAAGTTTTTCGATGGAAGACCAGCTTGAAGAAGCACCTCGAGAAGCATGACAAGAAAggtAAGCCCGCGGATTCTCTGCCTTACTGCTCGCCGTGTGGAGTGACGTTCTCGAGTGTCAGCACGTACCAGCGCCATCTCAAAAACAGTCTCAAGCACGTCACCGTCAACGAGCTCAAGTTCATATGTGCGGATTGCAACCGTAAATTTGCAAACAAGACCAAACTGAGGGACCATATTGAAGAAAAACATTTGCACAAGACATACCAGTGTGATATTTGTCATAAGCCATCAAAGAACCGCGTGTGTCTGGATCAGCACATGAGGAACGTGCATCGTGGTCGTCCCAACAACAAAATATGCCATTATTGCGGCAAGGGATTCCCGACAAAAGTGCAGCTGGAGTCGCATATTCGTTCGCACACCGGCGAAAGGCCCTTCATATGCGAGTTCTGCCCGACGACATTCTCTCAGCAGTCCAATCTCTACAAACATAACAGACAGGTCCATATGAACATAAAAGCCAAATCGTATCCGATGTGCCGCAAACGGAAACAAACCGACGCGCCGCAGCAGAGCGAAAGGCCGATGCAACTGGAAACACCTCAGAGATCTTTGGTGTTGCTTCACGTCAGGGGGTTCGACATGATGTGA
- Protein Sequence
- MTGRGRELADVLERRGINVACLQETKWKGARAREIGVGFKFFYCGSDGRRNGVGIVLDNELKKCVTDVRRVNDRLIVVKLLFEGVALNVISVYAPQTGCSEVVKETFWKGFDAVMMEIPEGEEVYIGGDFNGHVGRMKGGYERVHGGWGYGDRNEGGETLLQAATAFDLAIVNTFFQKRDQHLITYNSGNHRTQIDYFLIRRNNIRAAKNCKIIPGEALVSQHRLLLLDLKFKVQSNRNKPSPPLKTKWWVLEKEEYAEEFRRRVVNKMMEMKDMEGKSVNECWNEMAACMRKAAKDVFGETKGKRKIDRETWWWDKEVQNIIKEKKIAFKEWKSVDDEDSVLKEQMKAKYVECKKNSKKAVAAARAKVRDKLYNSLESAQGQNNLYRLARAREKSARDIAHVKCIKDEAGKVLTNDDEIKKRWQGYFKRLLNEENDWSGELADVPTSLGVVPEVSMDEVKEAVQDMKNGKAVGPDGIPAEVWKFLKVDGWMWLTLFCNKLLREEVIPDEWCNSSLVPIYKNKGDVQDCSSYRGIKLMSHSMKIWEKVIARRMRKESEVTQNQFGFMPGRGTTDAIFALRQLCEKYRRTHKNLHMVFIDLEKAYDRVPREVLWWALKEKRVPEKYIRLVRSMYGRASTHVRCESGVTDKFSVAVGLHQGSALSPYLFLLIMDALTSDIQEEAPWCMLFADDIVLVGENASEIQGRLEKWRERLENVGFRISRAKTEHLFCDFGGASSFSHIALNGVSLPVCSDFRYLGSLIQNDGDIDRDVKNRINAGWIKWRQVSSTTCVPRMPLRLKGKIYKTIIRPVVLYGSECWATKETDERRVHVAEMRMLRWMCGNLSEYLLTDASRPPRLKIHKLPNLDIVPTIEIEVTSWTVDKNREPETRDASPKREVHIKKEEFDDVDNSSKDVKHENGSYDSDCQYQSDANSGSREIEKEMKLARAAKKKKKIKNKKNNVRKAEKLIKKIQNERKETQNRSRTTEQKISTVELSYEEMLEERDKAVKREQYVCAEYKCEKCILAFTMQKSYMDHMAAKHSPDLGDYSCPICQTVIASVESFTAHYKRHLRRYECGTCGKRTMDRKAMAQHYTSTHTAGDTKQYTCNLCGKISMSIDAHRYHRGTHRARVACTECDKTFSHRAGLMNHRLTVHKLNNMFPCHVCEKVFRWKTSLKKHLEKHDKKGKPADSLPYCSPCGVTFSSVSTYQRHLKNSLKHVTVNELKFICADCNRKFANKTKLRDHIEEKHLHKTYQCDICHKPSKNRVCLDQHMRNVHRGRPNNKICHYCGKGFPTKVQLESHIRSHTGERPFICEFCPTTFSQQSNLYKHNRQVHMNIKAKSYPMCRKRKQTDAPQQSERPMQLETPQRSLVLLHVRGFDMM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -