Basic Information

Insect: Luffia ferchaultella
Gene Symbol: -
Assembly: GCA_949709985.1
Location: OX453251.1:3406921-3417983[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00027 0.024 15.9 1.4 1 23 305 327 305 327 0.99

2 10 0.38 33 6.0 7.5 1 23 334 357 334 357 0.96

3 10 2.2e-05 0.002 19.3 0.2 1 23 388 411 388 411 0.97

4 10 0.0013 0.11 13.8 1.9 2 23 416 438 415 438 0.95

5 10 0.33 29 6.2 0.0 2 20 449 467 449 469 0.93

6 10 0.00019 0.016 16.4 0.2 3 23 479 499 479 499 0.99

7 10 0.00043 0.038 15.3 3.8 2 23 514 535 513 535 0.96

8 10 7.9e-07 6.8e-05 23.9 0.1 1 23 541 563 541 563 0.98

9 10 1.7e-05 0.0014 19.7 3.7 1 23 569 592 569 592 0.98

10 10 0.014 1.2 10.5 6.3 1 23 598 621 598 622 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00027	0.024	15.9	1.4	1	23	305	327	305	327	0.99
2	10	0.38	33	6.0	7.5	1	23	334	357	334	357	0.96
3	10	2.2e-05	0.002	19.3	0.2	1	23	388	411	388	411	0.97
4	10	0.0013	0.11	13.8	1.9	2	23	416	438	415	438	0.95
5	10	0.33	29	6.2	0.0	2	20	449	467	449	469	0.93
6	10	0.00019	0.016	16.4	0.2	3	23	479	499	479	499	0.99
7	10	0.00043	0.038	15.3	3.8	2	23	514	535	513	535	0.96
8	10	7.9e-07	6.8e-05	23.9	0.1	1	23	541	563	541	563	0.98
9	10	1.7e-05	0.0014	19.7	3.7	1	23	569	592	569	592	0.98
10	10	0.014	1.2	10.5	6.3	1	23	598	621	598	622	0.95

Sequence Information

Coding Sequence: atgcAAGCAGTCAAAGCTTGTAGAACTTGTCTTATGACCGACGTCAAATTATATAGCATGTACGACTCTTTTATTTACAATGCATATCTGCAACTAACTGGTTTGATAAAATTTGAATCACCGGACCACATTTGCTTTGAATGTGCATCACTTTTAAAGAAGTTTGAGGATTTTCGCAGTAAGTGTATGAAAGCACACACACTGCTTTCTGGCTTTATTCAAGACAACATTGAGctCACGCAAGATATTATTCGTAGTGTGAATCGCAAAGAAAACAAGTTAGAATCATCATTGAGAATATCAGAAACAAAAACAGTTAATTTTTATCCTGAATTAAATAGAACTGGTGATTGTAGTGATAATGAAGAAATGCTTTCTCTAGACACAGTGAAAATGGAAGGAAATGCTATTGACAGCAGCCATAAAAATTCAGAAGCTTACAAATATCATCAGATTGATCCATCAGAGTTTACAGACAATAAGCATATGATTTTAGTGTCATCAGCCAATATCGAGGATAATATATCTTTAGAAAAACCACAGACTAGAAACTGCaaaaatgtactgaaaaatagtaaattaaaagtatcaaaaccagataaaaataaaaaagtcaaaccaaaaactaaaatgaaaaagattaaaaatgaaTCTGAAGCaagaaataaaaggaaaatCAAAATGGAAGTCAGCTCCACAGATGATGATATGGATACTTCTgcaattgaatataaaaataaagttaacaaacCCAGTAAAATAACCAAGAATGATGCCATTAAAAAGAGGTCTCGGCCATCTTTAGACGAAAGTTTCTTCGAAGGTTATGCTACAATAGTTCTTTTGACACCAGAACAAGCTAAAAAAGAAGTTTTACAAAGAAAAGATTCAAGTAACTACATAAATTGTCAATATAAATGTGATTTGTGTTACAGAGGTTTTGAGGCTCAGAGTACGTATGAGAATCATATGAAAAAGCACAGTCCAGAAAGTGGGCCACACGAATGCGCATATTGCCATATGCGATTTCCCGGTCTGAGCGTGTTATGCAGGCATAGGCAGTCATGTCACAAACGAAAATTCTACTGTCAAATATGCCCTTATACATGTTTCTGCTCACACCAAGCAAAAATACATGTTAATCTGcacaaaggaaaaaaatatccatGTAAAGAGTGCGGTGAAGTGTTCAGTATGCCGAACAGTTTACTTATGCACAAACGAATTAAACATGCAACAGAGTGTGTGTGCGATCTATGTGGAAGTACTTTTACTAATGAACGTGGATTAAGGTCACACAAGAAAATGTTACACAGACAGGAAACGAATGCACGACACGGACCGTCGTGTGAGCAGTGCGGCGTGCAGTTCGCGAGCGATGTGGCTTGGAAGAGGCATCTTGTTTTGTCTTCCAAACACGGTGTCAGCAATGGATGTGAGACTTGCGGCGAGACGTTCCCGGATTCTTTGACTTTAAAAGAACACGCGCGGACGCACACGCGGCGGCGGCATGCCAGCGCCACGGCCACCGCTGTTTGCGTCTGCGAGGTCTGCGGGAAGACATTCAAGGAGCTCTGTTTCCTGGTGTTACACCAACGTACGCACACTGGCGAGCGGCCGTTCCGTTGCGAGGACTGCGGCAAGGCGTTCCCTTCGCCAGCGGCGCTAACTTCACACCGCGACACCCACACCACGAGCGCATGTTACCGGTGCCAACTTTGCACCAAACAGTTCACGTTCAGAAGCTCCCTATACAGGCACATGAAGATCTCGCACCTAGGTTTCCGTCCACACAAATGCAGCATGTGCGAGAAGACCTTCCCTACGCCGTGTCAAGTCCGTCTTCACACAAAATACGTACATCACAAAGTGCCATGGCCAAAGCGCGAGCGACGCAGACAACCCTCTCAGCCAAACCAGGAAGTAGGATATGTATATGATAATTGA
Protein Sequence: MQAVKACRTCLMTDVKLYSMYDSFIYNAYLQLTGLIKFESPDHICFECASLLKKFEDFRSKCMKAHTLLSGFIQDNIELTQDIIRSVNRKENKLESSLRISETKTVNFYPELNRTGDCSDNEEMLSLDTVKMEGNAIDSSHKNSEAYKYHQIDPSEFTDNKHMILVSSANIEDNISLEKPQTRNCKNVLKNSKLKVSKPDKNKKVKPKTKMKKIKNESEARNKRKIKMEVSSTDDDMDTSAIEYKNKVNKPSKITKNDAIKKRSRPSLDESFFEGYATIVLLTPEQAKKEVLQRKDSSNYINCQYKCDLCYRGFEAQSTYENHMKKHSPESGPHECAYCHMRFPGLSVLCRHRQSCHKRKFYCQICPYTCFCSHQAKIHVNLHKGKKYPCKECGEVFSMPNSLLMHKRIKHATECVCDLCGSTFTNERGLRSHKKMLHRQETNARHGPSCEQCGVQFASDVAWKRHLVLSSKHGVSNGCETCGETFPDSLTLKEHARTHTRRRHASATATAVCVCEVCGKTFKELCFLVLHQRTHTGERPFRCEDCGKAFPSPAALTSHRDTHTTSACYRCQLCTKQFTFRSSLYRHMKISHLGFRPHKCSMCEKTFPTPCQVRLHTKYVHHKVPWPKRERRRQPSQPNQEVGYVYDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -