Basic Information

Insect: Luffia ferchaultella
Gene Symbol: X-element\ORF2
Assembly: GCA_949709985.1
Location: OX453265.1:5625792-5633195[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.023 2 9.9 0.2 1 22 531 552 531 554 0.89

2 17 0.35 31 6.1 0.2 3 23 584 605 583 605 0.94

3 17 0.0023 0.2 13.0 0.7 1 23 627 649 627 649 0.97

4 17 0.0046 0.4 12.0 0.1 1 23 653 675 653 675 0.95

5 17 0.085 7.3 8.1 0.3 1 23 680 703 680 703 0.92

6 17 0.0037 0.32 12.3 3.7 1 23 709 732 709 732 0.97

7 17 3.9e-05 0.0034 18.6 1.9 1 23 739 762 739 762 0.98

8 17 0.00039 0.034 15.4 0.5 1 23 768 790 768 790 0.96

9 17 2.4 2.1e+02 3.5 0.3 1 23 929 952 929 952 0.87

10 17 0.0021 0.18 13.1 0.7 3 23 978 999 976 999 0.94

11 17 0.0076 0.66 11.4 0.1 1 23 1021 1043 1021 1043 0.98

12 17 0.001 0.089 14.1 0.2 1 23 1047 1069 1047 1069 0.98

13 17 0.0025 0.22 12.9 1.1 1 23 1074 1097 1074 1097 0.96

14 17 0.026 2.3 9.7 0.5 2 23 1104 1126 1104 1126 0.94

15 17 0.00034 0.03 15.6 2.4 1 23 1133 1156 1133 1156 0.96

16 17 0.0015 0.13 13.6 3.7 2 23 1163 1184 1162 1184 0.96

17 17 5.1e-05 0.0045 18.2 0.6 1 23 1190 1212 1190 1212 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.023	2	9.9	0.2	1	22	531	552	531	554	0.89
2	17	0.35	31	6.1	0.2	3	23	584	605	583	605	0.94
3	17	0.0023	0.2	13.0	0.7	1	23	627	649	627	649	0.97
4	17	0.0046	0.4	12.0	0.1	1	23	653	675	653	675	0.95
5	17	0.085	7.3	8.1	0.3	1	23	680	703	680	703	0.92
6	17	0.0037	0.32	12.3	3.7	1	23	709	732	709	732	0.97
7	17	3.9e-05	0.0034	18.6	1.9	1	23	739	762	739	762	0.98
8	17	0.00039	0.034	15.4	0.5	1	23	768	790	768	790	0.96
9	17	2.4	2.1e+02	3.5	0.3	1	23	929	952	929	952	0.87
10	17	0.0021	0.18	13.1	0.7	3	23	978	999	976	999	0.94
11	17	0.0076	0.66	11.4	0.1	1	23	1021	1043	1021	1043	0.98
12	17	0.001	0.089	14.1	0.2	1	23	1047	1069	1047	1069	0.98
13	17	0.0025	0.22	12.9	1.1	1	23	1074	1097	1074	1097	0.96
14	17	0.026	2.3	9.7	0.5	2	23	1104	1126	1104	1126	0.94
15	17	0.00034	0.03	15.6	2.4	1	23	1133	1156	1133	1156	0.96
16	17	0.0015	0.13	13.6	3.7	2	23	1163	1184	1162	1184	0.96
17	17	5.1e-05	0.0045	18.2	0.6	1	23	1190	1212	1190	1212	0.99

Sequence Information

Coding Sequence: ATGGGAGATTTTAATACCTGTCTACTTAAAAACGATTCTCGTAGTTCCGCACTCCACTCTCTCTCTCAGTCCTGTAACTTGTCTATTCTCCCTTTAAGTGCCACCCATCATTTTCCTAACTGTATCCCCTCACTTCTTGATCTTATTTTCATCTCCTCGACTCAGCATGTCGCTAAGTACGGGCAATGCCCAGCTGATGCATTTTCGTATCACGACCTTATCttcctttcttataaaattcgaCTACCAaaggaaaaaactaaaatgcttATGCAACGCAATTTCCGTGGTGTGAACGTGGATGAGCTCCGTAAGGATGCAGGCGGGATCGATTGGGCGCCTCTTTCGGCCTCTGGATCTGTCGATGATAAAGTTAGAAGGTTCAATTTTGAACTCACTAAGTTATACGATGTTCATGCTCCGATTCACCCGGTCAAAATGAAACACCTCTCTACGCCATGGTTGACGGCGGAACTCAAAacgttaattaacaaaaaagcgGCAGCCAGAACTCGGTTCAAACGGAATCCTACACCTTTTAACCATGATAAATATGTAGCTGCCCGCAATCACTGCAGAAGGGTGTGTAGGGATGCTCAGCGCCACCACATTCATGCTTCCGTTGAAAACGGTGATCCAGCTAAAGTCTGGAAATTTCTTAAATCACTGGGAGTTGGGAAAACACGACAAAACACTATCCCTCAAGAATTAAATATTGAGTTATTAAACCAACACTTCTCTTCTTCATCAAATTGTGATAGTGCCGCTAAAGCGAACACAATGAATTTTCTTTCATCTTTCCCGACTCCAGATTACTCACAGTTCTTCTTTAGTCAATTCTCTGATTGtgatgttaaaaagagcgtagtTTCTATTGCCTCCAATGCCGTTGGGAGTGACTGTATCAGCCGTAAAATGATACTTCCCATCCTTGACGAAATTCTACCAGTTATTACTCACATCCTTAACTACTCTATTTCTTGTGGGGTCTTTCCATCTACATGGAAGGATGCTCAAATCATACCCTTACCCAAGAAGGCAAACCCCATTTCTTTTTCCGAGTACCGTCCTATTTCTATATTGCCATTCCTTTCTAAAGTTCTTGAGCGTCTTGTCCATAATCAACTCATTGCCTTCCTTTCCAAAAATTGTCTTCTAAATCCATTCCAATCCGGGTTTCGTCGTGGTCACAGTACTGTCACCACCCTGGTCAGGATTACGGATGATATAAGACTAGGTATGGAGGGGGGGAATTTAACAGTCCTTGCACTACTTGATTTTAGCAATGCATTTAACACTGTTGATTTCGATATCCTTCTTGGTATACTTCGCTCTCTTAACATATCTCCGACAGTAATTGATTGGTTTCGTAGTTACCTATTGGGCCGCCGGCAACGTATCTGCCTCGAAGGTGAAGACGCGGCCGGGCCTATACAAAAGAGGATGGCAAAATCTGAAACGTCACAAATATGTACAGAGGAATacgtgaaattaattaataacctaGACGAGATTTTAGCAAGAAAAAGGTGTGTCTTACACATACTGGAATATTCTAAAGTTTGCCCGTTCAGATGGGCGAAAAATGTTTATAGTTGCTTTTACTGCGACGAACAGTTCCCAGAGCCTGCTTGGCTGCGTGAACACAACGCCAACAAGCACGCGTACATaaaaaatcaacaaatcaaAATAGTTCTGAAGAAACTGAAGAAATACGAGATGATAAAAGTTGATATAACGAATGTCGACTGTAAACTTTGCGACGAagatataaaaacttttaacgCTCTAAAACAACATCTTCTGCAAGCGCACAGCAAGCAATTAGATCCTAGATACGGCGACGGCATTCTGCCGTTCAAATTGACGACGAACGGTTTCAACTGCGTCCTATGCGACAAGAGATACGAAGAATTTAAGCTATTAAACCAGCATATGAACGTGCATTTTCAGAATTTCATATGCGAACAATGCGGCGCGGGTTTCGTTACTCCGGAACGTCTAAAAACGCACGCTTTTTCGCACGAAACCGGATCGTTTCAATGCGAGGCTTGTGACAAAATATTTAGATCGATGAATGCAAAAAACGAACACTACGCTTCTATCCATAAACAAGTGAAGAGACACCGGTGCCCGCAGTGCTCTGAATCGTTCAGGAATTATTTTCAAAGGAACAAGCATTTGAATTCTATACACGGtgtgaaaaataaagaatttaaatGCAATTTGTGCGAAAGGGTGTTCACTCTGAGCGGCAAATTGAGTCACCACATTAGGACGGTGCATTTGAAGGTGAAGCGGCATGCCTGTGACGTTTGCGAATGGAAGTTTTACGCGAAGTCCGAACTCCGGGAGCACATGATACGCCATGGCGGTGAAAGGAAATACCAGTGTGGAAAGGGCACGAGATCAAAAACGCCTACTCTAAAACCGGAAACAACTCGGAAAGAAGAGCGAATAGTACCGCTATTCCAAGTCGATTACGACAGGACCCTGTGCCGTCCGCTGGGCACCCTTCTAGGTTTCGATCGTTTGACGCCGAAATTGAAAGAATTTCTAAGAAAAATCGAAGCTAAAAACGAATGCTCTACAAATGTAAGATCGCCATCGAGAAGTTTATCACCAATGTCTCCAATACCTTTGGCATCAAAAACGATCGAGAAACCTATCAAAGAAAAATCACGGACTAAAGCAACAACGCCTAAACTACCAGACATGAGGCAAAATGCCTTAACGGTTTTCGAATTTTCTAGTGTATATCCATTTATATAtggaaacaataaatttaaatgtttcataTGCTCTCAGCCGTTCCTCGAAACGCCACCTTTAAAAGAACACATGCAGGAAACCCACACTTTCGCACCCTTGAAAAGGTTAATCAACAATAGAAGAGAAACTGTCATAAAAGTAGACGTAAGCactataatttgtaaaatatgttcaACTTCTTTCAAGGACCTATTATCATTAAAGATGCACCTGAaggaaaaacatgaaaaaaatctaGACATAGATATTAAAGACAACATGATTCCATTCAAATTGGACGGAGGCGTGTTCAAATGCGTTTTGTGCgaacaagtttttataaaagtcAGACTTTTAGTTATCCATATGAGCGTACACTTCAGTAACTACAGTTGCGACGTTTGCGGTTCTGGATTCATGACGTTGAGGCTGCTGAAGAAACATCTCGAAGTCCACGAAAATGGAAACTTCCCTTGCGACCTGTGCGATAAAATTTTCAACACTTCGCACAAAAGGTCGCTCCATATCCGCGGCGTGCATCTGAAGCAGTGCCCGCGCCGCTGCCCAATGTGCCCTGAAAGGTTTAACTCCAACTACAGAAGAACTATCCATTTACAGAACGTGCATAATCAGTCGACGAGGGTACACAAGTGCGATATATGTGAACGTGCCTTCAATCTGAAATATCATCTCATCTCTCACACTCGAGCGGTACATCTTCAGGAGAGGAATCAACAATGCAAGTTGTGTTTACAAAGATTCTGCAGTAAAGAGACGTTGAAACGCCACATGGTTATTCACACCGGCGAGAAGAACTACAAATGTGAAGTTTGCGGCATGGCGTTTTTGAGGAGAAAGAATTTAAAAGACCATCTGAGGTTGCATGATGTCgtttag
Protein Sequence: MGDFNTCLLKNDSRSSALHSLSQSCNLSILPLSATHHFPNCIPSLLDLIFISSTQHVAKYGQCPADAFSYHDLIFLSYKIRLPKEKTKMLMQRNFRGVNVDELRKDAGGIDWAPLSASGSVDDKVRRFNFELTKLYDVHAPIHPVKMKHLSTPWLTAELKTLINKKAAARTRFKRNPTPFNHDKYVAARNHCRRVCRDAQRHHIHASVENGDPAKVWKFLKSLGVGKTRQNTIPQELNIELLNQHFSSSSNCDSAAKANTMNFLSSFPTPDYSQFFFSQFSDCDVKKSVVSIASNAVGSDCISRKMILPILDEILPVITHILNYSISCGVFPSTWKDAQIIPLPKKANPISFSEYRPISILPFLSKVLERLVHNQLIAFLSKNCLLNPFQSGFRRGHSTVTTLVRITDDIRLGMEGGNLTVLALLDFSNAFNTVDFDILLGILRSLNISPTVIDWFRSYLLGRRQRICLEGEDAAGPIQKRMAKSETSQICTEEYVKLINNLDEILARKRCVLHILEYSKVCPFRWAKNVYSCFYCDEQFPEPAWLREHNANKHAYIKNQQIKIVLKKLKKYEMIKVDITNVDCKLCDEDIKTFNALKQHLLQAHSKQLDPRYGDGILPFKLTTNGFNCVLCDKRYEEFKLLNQHMNVHFQNFICEQCGAGFVTPERLKTHAFSHETGSFQCEACDKIFRSMNAKNEHYASIHKQVKRHRCPQCSESFRNYFQRNKHLNSIHGVKNKEFKCNLCERVFTLSGKLSHHIRTVHLKVKRHACDVCEWKFYAKSELREHMIRHGGERKYQCGKGTRSKTPTLKPETTRKEERIVPLFQVDYDRTLCRPLGTLLGFDRLTPKLKEFLRKIEAKNECSTNVRSPSRSLSPMSPIPLASKTIEKPIKEKSRTKATTPKLPDMRQNALTVFEFSSVYPFIYGNNKFKCFICSQPFLETPPLKEHMQETHTFAPLKRLINNRRETVIKVDVSTIICKICSTSFKDLLSLKMHLKEKHEKNLDIDIKDNMIPFKLDGGVFKCVLCEQVFIKVRLLVIHMSVHFSNYSCDVCGSGFMTLRLLKKHLEVHENGNFPCDLCDKIFNTSHKRSLHIRGVHLKQCPRRCPMCPERFNSNYRRTIHLQNVHNQSTRVHKCDICERAFNLKYHLISHTRAVHLQERNQQCKLCLQRFCSKETLKRHMVIHTGEKNYKCEVCGMAFLRRKNLKDHLRLHDVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -